RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 KLHDC10Q6PID8 442 aa14.46□□□□□ -0.09
CSNK1D-209ENST00000578904 SCD5Q86SK9 330 aa14.46□□□□□ -0.09
CSNK1D-209ENST00000578904 CREG2Q8IUH2 290 aa14.46□□□□□ -0.09
CSNK1D-209ENST00000578904 DQX1Q8TE96 717 aaKnown RBP14.46□□□□□ -0.09
CSNK1D-209ENST00000578904 COG1Q8WTW3 980 aa14.46□□□□□ -0.09
CSNK1D-209ENST00000578904 HSPH1Q92598 858 aa14.46□□□□□ -0.09
CSNK1D-209ENST00000578904 ALG3Q92685 438 aa14.46□□□□□ -0.09
CSNK1D-209ENST00000578904 NTAN1Q96AB6 310 aa14.46□□□□□ -0.09
CSNK1D-209ENST00000578904 TRPC7Q9HCX4 862 aa14.46□□□□□ -0.09
CSNK1D-209ENST00000578904 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.46□□□□□ -0.09
CSNK1D-209ENST00000578904 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.46□□□□□ -0.09
CSNK1D-209ENST00000578904 NOTCH4Q99466 2003 aa14.46□□□□□ -0.1
CSNK1D-209ENST00000578904 SYNJ2BP-COX16A0A087WUM0 186 aa14.45□□□□□ -0.1
CSNK1D-209ENST00000578904 XIRP2A4UGR9 3374 aa14.45□□□□□ -0.1
CSNK1D-209ENST00000578904 ZNF487B1APH4 448 aa14.45□□□□□ -0.1
CSNK1D-209ENST00000578904 ZNF185O15231 689 aa14.45□□□□□ -0.1
CSNK1D-209ENST00000578904 TLR5O60602 858 aa14.45□□□□□ -0.1
CSNK1D-209ENST00000578904 APOEP02649 317 aa14.45□□□□□ -0.1
CSNK1D-209ENST00000578904 FGGP02679 453 aa14.45□□□□□ -0.1
CSNK1D-209ENST00000578904 RARAP10276 462 aa14.45□□□□□ -0.1
CSNK1D-209ENST00000578904 PYGMP11217 842 aa14.45□□□□□ -0.1
CSNK1D-209ENST00000578904 SP100P23497 879 aaPredicted RBP14.45□□□□□ -0.1
CSNK1D-209ENST00000578904 KDELR1P24390 212 aa14.45□□□□□ -0.1
CSNK1D-209ENST00000578904 DDX6P26196 483 aaKnown RBP eCLIP14.45□□□□□ -0.1
CSNK1D-209ENST00000578904 GBP2P32456 591 aaPredicted RBP14.45□□□□□ -0.1
CSNK1D-209ENST00000578904 PTPN7P35236 360 aa14.45□□□□□ -0.1
CSNK1D-209ENST00000578904 ARL4AP40617 200 aa14.45□□□□□ -0.1
CSNK1D-209ENST00000578904 CXCR3P49682 368 aa14.45□□□□□ -0.1
CSNK1D-209ENST00000578904 TFDP2Q14188 446 aa14.45□□□□□ -0.1
CSNK1D-209ENST00000578904 PPP2R5DQ14738 602 aa14.45□□□□□ -0.1
CSNK1D-209ENST00000578904 SMAD2Q15796 467 aaKnown RBP14.45□□□□□ -0.1
CSNK1D-209ENST00000578904 STXBP5Q5T5C0 1151 aa14.45□□□□□ -0.1
CSNK1D-209ENST00000578904 BNIPLQ7Z465 357 aa14.45□□□□□ -0.1
CSNK1D-209ENST00000578904 NPAS3Q8IXF0 933 aa14.45□□□□□ -0.1
CSNK1D-209ENST00000578904 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.45□□□□□ -0.1
CSNK1D-209ENST00000578904 DOCK6Q96HP0 2047 aa14.45□□□□□ -0.1
CSNK1D-209ENST00000578904 RUNDC3BQ96NL0 473 aa14.45□□□□□ -0.1
CSNK1D-209ENST00000578904 CARD6Q9BX69 1037 aa14.45□□□□□ -0.1
CSNK1D-209ENST00000578904 OSBPL8Q9BZF1 889 aa14.45□□□□□ -0.1
CSNK1D-209ENST00000578904 NMUR1Q9HB89 426 aa14.45□□□□□ -0.1
CSNK1D-209ENST00000578904 COX16Q9P0S2 106 aa14.45□□□□□ -0.1
CSNK1D-209ENST00000578904 RCOR3Q9P2K3 495 aaPredicted RBP14.45□□□□□ -0.1
CSNK1D-209ENST00000578904 ZMYM5Q9UJ78 669 aa14.45□□□□□ -0.1
CSNK1D-209ENST00000578904 DNMT3LQ9UJW3 386 aa14.45□□□□□ -0.1
CSNK1D-209ENST00000578904 TLR6Q9Y2C9 796 aa14.45□□□□□ -0.1
CSNK1D-209ENST00000578904 HBS1LQ9Y450 684 aaKnown RBP14.45□□□□□ -0.1
CSNK1D-209ENST00000578904 OBSL1O75147 1896 aa14.44□□□□□ -0.1
CSNK1D-209ENST00000578904 C2orf78A6NCI8 922 aa14.44□□□□□ -0.1
CSNK1D-209ENST00000578904 TNFRSF10AO00220 468 aa14.44□□□□□ -0.1
CSNK1D-209ENST00000578904 KRIT1O00522 736 aa14.44□□□□□ -0.1
CSNK1D-209ENST00000578904 RIOK3O14730 519 aaKnown RBP14.44□□□□□ -0.1
CSNK1D-209ENST00000578904 IRAK2O43187 625 aa14.44□□□□□ -0.1
CSNK1D-209ENST00000578904 IL9P15248 144 aa14.44□□□□□ -0.1
CSNK1D-209ENST00000578904 ZFXP17010 805 aaPredicted RBP14.44□□□□□ -0.1
CSNK1D-209ENST00000578904 HTR7P34969 479 aa14.44□□□□□ -0.1
CSNK1D-209ENST00000578904 MARCKSL1P49006 195 aa14.44□□□□□ -0.1
CSNK1D-209ENST00000578904 PGFP49763 221 aa14.44□□□□□ -0.1
CSNK1D-209ENST00000578904 CDH6P55285 790 aa14.44□□□□□ -0.1
CSNK1D-209ENST00000578904 COG7P83436 770 aa14.44□□□□□ -0.1
CSNK1D-209ENST00000578904 SCAPQ12770 1279 aa14.44□□□□□ -0.1
CSNK1D-209ENST00000578904 ZNF211Q13398 564 aaPredicted RBP14.44□□□□□ -0.1
CSNK1D-209ENST00000578904 SMTNL2Q2TAL5 461 aa14.44□□□□□ -0.1
CSNK1D-209ENST00000578904 SH3PXD2AQ5TCZ1 1133 aa14.44□□□□□ -0.1
CSNK1D-209ENST00000578904 DAB2IPQ5VWQ8 1189 aa14.44□□□□□ -0.1
CSNK1D-209ENST00000578904 TXNDC8Q6A555 127 aa14.44□□□□□ -0.1
CSNK1D-209ENST00000578904 SPOCD1Q6ZMY3 1216 aa14.44□□□□□ -0.1
CSNK1D-209ENST00000578904 OTOP3Q7RTS5 596 aa14.44□□□□□ -0.1
CSNK1D-209ENST00000578904 ZNF572Q7Z3I7 529 aaPredicted RBP14.44□□□□□ -0.1
CSNK1D-209ENST00000578904 TAC4Q86UU9 113 aa14.44□□□□□ -0.1
CSNK1D-209ENST00000578904 FAM131BQ86XD5 332 aa14.44□□□□□ -0.1
CSNK1D-209ENST00000578904 SLC13A5Q86YT5 568 aaPredicted RBP14.44□□□□□ -0.1
CSNK1D-209ENST00000578904 UNC45BQ8IWX7 931 aa14.44□□□□□ -0.1
CSNK1D-209ENST00000578904 ARFGAP1Q8N6T3 406 aa14.44□□□□□ -0.1
CSNK1D-209ENST00000578904 MAB21L3Q8N8X9 362 aa14.44□□□□□ -0.1
CSNK1D-209ENST00000578904 ATP6V0D2Q8N8Y2 350 aa14.44□□□□□ -0.1
CSNK1D-209ENST00000578904 TDRD5Q8NAT2 981 aaKnown RBP14.44□□□□□ -0.1
CSNK1D-209ENST00000578904 TTC13Q8NBP0 860 aa14.44□□□□□ -0.1
CSNK1D-209ENST00000578904 FGF13Q92913 245 aa14.44□□□□□ -0.1
CSNK1D-209ENST00000578904 RNF25Q96BH1 459 aaPredicted RBP14.44□□□□□ -0.1
CSNK1D-209ENST00000578904 SNRNP25Q9BV90 132 aaKnown RBP14.44□□□□□ -0.1
CSNK1D-209ENST00000578904 PHF7Q9BWX1 381 aaPredicted RBP14.44□□□□□ -0.1
CSNK1D-209ENST00000578904 CALN1Q9BXU9 219 aa14.44□□□□□ -0.1
CSNK1D-209ENST00000578904 DHX35Q9H5Z1 703 aaKnown RBP14.44□□□□□ -0.1
CSNK1D-209ENST00000578904 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.44□□□□□ -0.1
CSNK1D-209ENST00000578904 OSER1Q9NX31 292 aa14.44□□□□□ -0.1
CSNK1D-209ENST00000578904 DONSONQ9NYP3 566 aa14.44□□□□□ -0.1
CSNK1D-209ENST00000578904 MARCH2Q9P0N8 246 aa14.44□□□□□ -0.1
CSNK1D-209ENST00000578904 STIM2Q9P246 746 aa14.44□□□□□ -0.1
CSNK1D-209ENST00000578904 CDH7Q9ULB5 785 aa14.44□□□□□ -0.1
CSNK1D-209ENST00000578904 FZD10Q9ULW2 581 aa14.44□□□□□ -0.1
CSNK1D-209ENST00000578904 AP4E1Q9UPM8 1137 aa14.44□□□□□ -0.1
CSNK1D-209ENST00000578904 PRUNE2Q8WUY3 3088 aa14.43□□□□□ -0.1
CSNK1D-209ENST00000578904 TRAV19A0A0A6YYK7 116 aa14.43□□□□□ -0.1
CSNK1D-209ENST00000578904 SOBPA7XYQ1 873 aa14.43□□□□□ -0.1
CSNK1D-209ENST00000578904 EFCAB8A8MWE9 144 aa14.43□□□□□ -0.1
CSNK1D-209ENST00000578904 H3BRJ5 948 aa14.43□□□□□ -0.1
CSNK1D-209ENST00000578904 OAS1P00973 400 aaKnown RBP14.43□□□□□ -0.1
CSNK1D-209ENST00000578904 IGLV3-25P01717 112 aa14.43□□□□□ -0.1
CSNK1D-209ENST00000578904 CKMP06732 381 aa14.43□□□□□ -0.1
CSNK1D-209ENST00000578904 IL1R2P27930 398 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms