RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 OAZ2O95190 189 aa10.63□□□□□ -0.71
SS18-210ENST00000578700 CALCAP01258 141 aa10.63□□□□□ -0.71
SS18-210ENST00000578700 MMP8P22894 467 aa10.63□□□□□ -0.71
SS18-210ENST00000578700 RRM1P23921 792 aa10.63□□□□□ -0.71
SS18-210ENST00000578700 LRPAP1P30533 357 aa10.63□□□□□ -0.71
SS18-210ENST00000578700 HOXA6P31267 233 aa10.63□□□□□ -0.71
SS18-210ENST00000578700 CXCR5P32302 372 aa10.63□□□□□ -0.71
SS18-210ENST00000578700 CETN2P41208 172 aa10.63□□□□□ -0.71
SS18-210ENST00000578700 SLC8A3P57103 927 aa10.63□□□□□ -0.71
SS18-210ENST00000578700 SHC2P98077 582 aa10.63□□□□□ -0.71
SS18-210ENST00000578700 CREB5Q02930 508 aa10.63□□□□□ -0.71
SS18-210ENST00000578700 GPR17Q13304 367 aa10.63□□□□□ -0.71
SS18-210ENST00000578700 ELF2Q15723 593 aa10.63□□□□□ -0.71
SS18-210ENST00000578700 DCUN1D2Q6PH85 259 aa10.63□□□□□ -0.71
SS18-210ENST00000578700 RSRC2Q7L4I2 434 aaKnown RBP10.63□□□□□ -0.71
SS18-210ENST00000578700 MTERF4Q7Z6M4 381 aaKnown RBP10.63□□□□□ -0.71
SS18-210ENST00000578700 ITIH5Q86UX2 942 aa10.63□□□□□ -0.71
SS18-210ENST00000578700 NT5DC3Q86UY8 548 aa10.63□□□□□ -0.71
SS18-210ENST00000578700 CREG2Q8IUH2 290 aa10.63□□□□□ -0.71
SS18-210ENST00000578700 C1orf131Q8NDD1 294 aaKnown RBP10.63□□□□□ -0.71
SS18-210ENST00000578700 PSMG2Q969U7 264 aa10.63□□□□□ -0.71
SS18-210ENST00000578700 HES6Q96HZ4 224 aa10.63□□□□□ -0.71
SS18-210ENST00000578700 SDCBP2Q9H190 292 aa10.63□□□□□ -0.71
SS18-210ENST00000578700 EBF3Q9H4W6 596 aa10.63□□□□□ -0.71
SS18-210ENST00000578700 TASP1Q9H6P5 420 aa10.63□□□□□ -0.71
SS18-210ENST00000578700 VPS45Q9NRW7 570 aa10.63□□□□□ -0.71
SS18-210ENST00000578700 GDAP2Q9NXN4 497 aa10.63□□□□□ -0.71
SS18-210ENST00000578700 ANAPC7Q9UJX3 599 aa10.63□□□□□ -0.71
SS18-210ENST00000578700 ASB3Q9Y575 518 aa10.63□□□□□ -0.71
SS18-210ENST00000578700 ALG6Q9Y672 507 aa10.63□□□□□ -0.71
SS18-210ENST00000578700 FASNP49327 2511 aaKnown RBP10.62□□□□□ -0.71
SS18-210ENST00000578700 NUP205Q92621 2012 aa10.62□□□□□ -0.71
SS18-210ENST00000578700 ANK1P16157 1881 aa10.62□□□□□ -0.71
SS18-210ENST00000578700 GOLGA6L10A0A0M3HER8 536 aa10.62□□□□□ -0.71
SS18-210ENST00000578700 C4orf47A7E2U8 309 aa10.62□□□□□ -0.71
SS18-210ENST00000578700 M0QYV0 167 aa10.62□□□□□ -0.71
SS18-210ENST00000578700 ZNF185O15231 689 aa10.62□□□□□ -0.71
SS18-210ENST00000578700 RNF40O75150 1001 aa10.62□□□□□ -0.71
SS18-210ENST00000578700 ERLIN1O75477 346 aa10.62□□□□□ -0.71
SS18-210ENST00000578700 FGF19O95750 216 aa10.62□□□□□ -0.71
SS18-210ENST00000578700 EGFP01133 1207 aa10.62□□□□□ -0.71
SS18-210ENST00000578700 SETSIPP0DME0 302 aa10.62□□□□□ -0.71
SS18-210ENST00000578700 GBP1P32455 592 aa10.62□□□□□ -0.71
SS18-210ENST00000578700 CDH5P33151 784 aaPredicted RBP10.62□□□□□ -0.71
SS18-210ENST00000578700 GNL1P36915 607 aaPredicted RBP10.62□□□□□ -0.71
SS18-210ENST00000578700 RUNX3Q13761 415 aa10.62□□□□□ -0.71
SS18-210ENST00000578700 VEPH1Q14D04 833 aa10.62□□□□□ -0.71
SS18-210ENST00000578700 SLC39A12Q504Y0 691 aa10.62□□□□□ -0.71
SS18-210ENST00000578700 ODF2Q5BJF6 829 aa10.62□□□□□ -0.71
SS18-210ENST00000578700 SEL1L2Q5TEA6 688 aa10.62□□□□□ -0.71
SS18-210ENST00000578700 FSTL4Q6MZW2 842 aa10.62□□□□□ -0.71
SS18-210ENST00000578700 ZNF572Q7Z3I7 529 aaPredicted RBP10.62□□□□□ -0.71
SS18-210ENST00000578700 TOP6BLQ8N6T0 577 aa10.62□□□□□ -0.71
SS18-210ENST00000578700 COG1Q8WTW3 980 aa10.62□□□□□ -0.71
SS18-210ENST00000578700 TFAP2BQ92481 460 aa10.62□□□□□ -0.71
SS18-210ENST00000578700 C18orf8Q96DM3 657 aa10.62□□□□□ -0.71
SS18-210ENST00000578700 EDEM2Q9BV94 578 aa10.62□□□□□ -0.71
SS18-210ENST00000578700 SLC46A2Q9BY10 475 aa10.62□□□□□ -0.71
SS18-210ENST00000578700 OXCT2Q9BYC2 517 aaPredicted RBP10.62□□□□□ -0.71
SS18-210ENST00000578700 ELOVL4Q9GZR5 314 aa10.62□□□□□ -0.71
SS18-210ENST00000578700 CARD9Q9H257 536 aa10.62□□□□□ -0.71
SS18-210ENST00000578700 OBP2AQ9NY56 170 aa10.62□□□□□ -0.71
SS18-210ENST00000578700 IP6K2Q9UHH9 426 aa10.62□□□□□ -0.71
SS18-210ENST00000578700 PACSIN2Q9UNF0 486 aaPredicted RBP10.62□□□□□ -0.71
SS18-210ENST00000578700 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.62□□□□□ -0.71
SS18-210ENST00000578700 PCDHGA5Q9Y5G8 931 aa10.62□□□□□ -0.71
SS18-210ENST00000578700 ITPR1Q14643 2758 aa10.61□□□□□ -0.71
SS18-210ENST00000578700 PPEF2O14830 753 aa10.61□□□□□ -0.71
SS18-210ENST00000578700 RHOBTB1O94844 696 aa10.61□□□□□ -0.71
SS18-210ENST00000578700 TOP3BO95985 862 aaKnown RBP10.61□□□□□ -0.71
SS18-210ENST00000578700 HOXB3P14651 431 aaPredicted RBP10.61□□□□□ -0.71
SS18-210ENST00000578700 ARSAP15289 507 aa10.61□□□□□ -0.71
SS18-210ENST00000578700 COMTP21964 271 aa10.61□□□□□ -0.71
SS18-210ENST00000578700 CDC25CP30307 473 aa10.61□□□□□ -0.71
SS18-210ENST00000578700 SSR1P43307 286 aaKnown RBP10.61□□□□□ -0.71
SS18-210ENST00000578700 GALK1P51570 392 aa10.61□□□□□ -0.71
SS18-210ENST00000578700 DGKEP52429 567 aa10.61□□□□□ -0.71
SS18-210ENST00000578700 RWDD2BP57060 319 aa10.61□□□□□ -0.71
SS18-210ENST00000578700 LILRA4P59901 499 aa10.61□□□□□ -0.71
SS18-210ENST00000578700 MAMLD1Q13495 774 aa10.61□□□□□ -0.71
SS18-210ENST00000578700 PPP2R5EQ16537 467 aa10.61□□□□□ -0.71
SS18-210ENST00000578700 PLK5Q496M5 336 aa10.61□□□□□ -0.71
SS18-210ENST00000578700 GLE1Q53GS7 698 aaKnown RBP10.61□□□□□ -0.71
SS18-210ENST00000578700 TMEM196Q5HYL7 178 aa10.61□□□□□ -0.71
SS18-210ENST00000578700 PLA2G2CQ5R387 149 aa10.61□□□□□ -0.71
SS18-210ENST00000578700 DAB2IPQ5VWQ8 1189 aa10.61□□□□□ -0.71
SS18-210ENST00000578700 SCARA3Q6AZY7 606 aa10.61□□□□□ -0.71
SS18-210ENST00000578700 PLEKHA7Q6IQ23 1121 aa10.61□□□□□ -0.71
SS18-210ENST00000578700 CC2D1AQ6P1N0 951 aaPredicted RBP10.61□□□□□ -0.71
SS18-210ENST00000578700 DENND1BQ6P3S1 775 aa10.61□□□□□ -0.71
SS18-210ENST00000578700 LCLAT1Q6UWP7 414 aa10.61□□□□□ -0.71
SS18-210ENST00000578700 UNQ6494/PRO21346Q6UXR6 183 aa10.61□□□□□ -0.71
SS18-210ENST00000578700 METTL23Q86XA0 190 aa10.61□□□□□ -0.71
SS18-210ENST00000578700 ADGRF2Q8IZF7 708 aa10.61□□□□□ -0.71
SS18-210ENST00000578700 TMEM86AQ8N2M4 240 aa10.61□□□□□ -0.71
SS18-210ENST00000578700 MAB21L3Q8N8X9 362 aa10.61□□□□□ -0.71
SS18-210ENST00000578700 C3orf20Q8ND61 904 aa10.61□□□□□ -0.71
SS18-210ENST00000578700 SPATA4Q8NEY3 305 aa10.61□□□□□ -0.71
SS18-210ENST00000578700 ACTRT1Q8TDG2 376 aa10.61□□□□□ -0.71
SS18-210ENST00000578700 WHAMMQ8TF30 809 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms