RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 ELF4Q99607 663 aaPredicted RBP7.57□□□□□ -1.2
CDK5RAP3-209ENST00000578663 TMEM30AQ9NV96 361 aa7.57□□□□□ -1.2
CDK5RAP3-209ENST00000578663 RBAKQ9NYW8 714 aaPredicted RBP7.57□□□□□ -1.2
CDK5RAP3-209ENST00000578663 LSM7Q9UK45 103 aaKnown RBP7.57□□□□□ -1.2
CDK5RAP3-209ENST00000578663 CFAP45Q9UL16 551 aa7.57□□□□□ -1.2
CDK5RAP3-209ENST00000578663 SSUH2Q9Y2M2 353 aa7.57□□□□□ -1.2
CDK5RAP3-209ENST00000578663 R3HCC1Q9Y3T6 440 aaKnown RBP7.57□□□□□ -1.2
CDK5RAP3-209ENST00000578663 SRPRBQ9Y5M8 271 aaKnown RBP7.57□□□□□ -1.2
CDK5RAP3-209ENST00000578663 SLCO1B1Q9Y6L6 691 aa7.57□□□□□ -1.2
CDK5RAP3-209ENST00000578663 PCSK5Q92824 1860 aa7.57□□□□□ -1.2
CDK5RAP3-209ENST00000578663 ATP8B3O60423 1300 aa7.56□□□□□ -1.2
CDK5RAP3-209ENST00000578663 PTPRJQ12913 1337 aa7.56□□□□□ -1.2
CDK5RAP3-209ENST00000578663 TLR5O60602 858 aa7.56□□□□□ -1.2
CDK5RAP3-209ENST00000578663 TSPAN3O60637 253 aa7.56□□□□□ -1.2
CDK5RAP3-209ENST00000578663 SEMA4FO95754 770 aa7.56□□□□□ -1.2
CDK5RAP3-209ENST00000578663 PENKP01210 267 aaPredicted RBP7.56□□□□□ -1.2
CDK5RAP3-209ENST00000578663 KRT19P08727 400 aa7.56□□□□□ -1.2
CDK5RAP3-209ENST00000578663 GARTP22102 1010 aa7.56□□□□□ -1.2
CDK5RAP3-209ENST00000578663 GLDCP23378 1020 aa7.56□□□□□ -1.2
CDK5RAP3-209ENST00000578663 LONP1P36776 959 aaKnown RBP7.56□□□□□ -1.2
CDK5RAP3-209ENST00000578663 CACNA2D1P54289 1103 aa7.56□□□□□ -1.2
CDK5RAP3-209ENST00000578663 BCAT1P54687 386 aa7.56□□□□□ -1.2
CDK5RAP3-209ENST00000578663 MFAP3P55082 362 aa7.56□□□□□ -1.2
CDK5RAP3-209ENST00000578663 CDH8P55286 799 aa7.56□□□□□ -1.2
CDK5RAP3-209ENST00000578663 WNT7BP56706 349 aa7.56□□□□□ -1.2
CDK5RAP3-209ENST00000578663 ERVPABLB-1P60509 514 aa7.56□□□□□ -1.2
CDK5RAP3-209ENST00000578663 RACK1P63244 317 aaKnown RBP7.56□□□□□ -1.2
CDK5RAP3-209ENST00000578663 CAMK2GQ13555 558 aaPredicted RBP7.56□□□□□ -1.2
CDK5RAP3-209ENST00000578663 ZRSR1Q15695 479 aaKnown RBP7.56□□□□□ -1.2
CDK5RAP3-209ENST00000578663 MDH1BQ5I0G3 518 aa7.56□□□□□ -1.2
CDK5RAP3-209ENST00000578663 KLHDC10Q6PID8 442 aa7.56□□□□□ -1.2
CDK5RAP3-209ENST00000578663 SHC4Q6S5L8 630 aa7.56□□□□□ -1.2
CDK5RAP3-209ENST00000578663 ADAT2Q7Z6V5 191 aaKnown RBP7.56□□□□□ -1.2
CDK5RAP3-209ENST00000578663 ZC3H18Q86VM9 953 aaKnown RBP7.56□□□□□ -1.2
CDK5RAP3-209ENST00000578663 DHX40Q8IX18 779 aaKnown RBP7.56□□□□□ -1.2
CDK5RAP3-209ENST00000578663 LSMEM2Q8N112 164 aa7.56□□□□□ -1.2
CDK5RAP3-209ENST00000578663 OR2T3Q8NH03 318 aa7.56□□□□□ -1.2
CDK5RAP3-209ENST00000578663 SAP25Q8TEE9 199 aa7.56□□□□□ -1.2
CDK5RAP3-209ENST00000578663 WBP2Q969T9 261 aa7.56□□□□□ -1.2
CDK5RAP3-209ENST00000578663 SKA1Q96BD8 255 aa7.56□□□□□ -1.2
CDK5RAP3-209ENST00000578663 BIRC7Q96CA5 298 aa7.56□□□□□ -1.2
CDK5RAP3-209ENST00000578663 HPDLQ96IR7 371 aa7.56□□□□□ -1.2
CDK5RAP3-209ENST00000578663 ANKRD36BP1Q96IX9 119 aa7.56□□□□□ -1.2
CDK5RAP3-209ENST00000578663 AK8Q96MA6 479 aa7.56□□□□□ -1.2
CDK5RAP3-209ENST00000578663 FAM213AQ9BRX8 229 aa7.56□□□□□ -1.2
CDK5RAP3-209ENST00000578663 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.56□□□□□ -1.2
CDK5RAP3-209ENST00000578663 KLF16Q9BXK1 252 aaPredicted RBP7.56□□□□□ -1.2
CDK5RAP3-209ENST00000578663 ACE2Q9BYF1 805 aaPredicted RBP7.56□□□□□ -1.2
CDK5RAP3-209ENST00000578663 DPH1Q9BZG8 443 aa7.56□□□□□ -1.2
CDK5RAP3-209ENST00000578663 ZNF518BQ9C0D4 1074 aa7.56□□□□□ -1.2
CDK5RAP3-209ENST00000578663 MTMR12Q9C0I1 747 aa7.56□□□□□ -1.2
CDK5RAP3-209ENST00000578663 NACA2Q9H009 215 aa7.56□□□□□ -1.2
CDK5RAP3-209ENST00000578663 LHX5Q9H2C1 402 aa7.56□□□□□ -1.2
CDK5RAP3-209ENST00000578663 C6orf106Q9H6K1 298 aaPredicted RBP7.56□□□□□ -1.2
CDK5RAP3-209ENST00000578663 CCSER2Q9H7U1 834 aa7.56□□□□□ -1.2
CDK5RAP3-209ENST00000578663 CYLDQ9NQC7 956 aa7.56□□□□□ -1.2
CDK5RAP3-209ENST00000578663 SEL1LQ9UBV2 794 aa7.56□□□□□ -1.2
CDK5RAP3-209ENST00000578663 ADAMTS1Q9UHI8 967 aa7.56□□□□□ -1.2
CDK5RAP3-209ENST00000578663 PCDHA7Q9UN72 937 aa7.56□□□□□ -1.2
CDK5RAP3-209ENST00000578663 EXOC7Q9UPT5 735 aa7.56□□□□□ -1.2
CDK5RAP3-209ENST00000578663 CLCA2Q9UQC9 943 aa7.56□□□□□ -1.2
CDK5RAP3-209ENST00000578663 ZFC3H1O60293 1989 aaKnown RBP7.56□□□□□ -1.2
CDK5RAP3-209ENST00000578663 K7ENP7 123 aa7.55□□□□□ -1.2
CDK5RAP3-209ENST00000578663 KIAA0391O15091 583 aaKnown RBP7.55□□□□□ -1.2
CDK5RAP3-209ENST00000578663 CUTAO60888 179 aa7.55□□□□□ -1.2
CDK5RAP3-209ENST00000578663 ITGAVP06756 1048 aa7.55□□□□□ -1.2
CDK5RAP3-209ENST00000578663 PDGFRBP09619 1106 aa7.55□□□□□ -1.2
CDK5RAP3-209ENST00000578663 IRF1P10914 325 aa7.55□□□□□ -1.2
CDK5RAP3-209ENST00000578663 CKMT2P17540 419 aa7.55□□□□□ -1.2
CDK5RAP3-209ENST00000578663 PTPN1P18031 435 aaKnown RBP7.55□□□□□ -1.2
CDK5RAP3-209ENST00000578663 ABCB4P21439 1286 aa7.55□□□□□ -1.2
CDK5RAP3-209ENST00000578663 EPHA8P29322 1005 aaPredicted RBP7.55□□□□□ -1.2
CDK5RAP3-209ENST00000578663 ACSL1P33121 698 aa7.55□□□□□ -1.2
CDK5RAP3-209ENST00000578663 ME1P48163 572 aa7.55□□□□□ -1.2
CDK5RAP3-209ENST00000578663 SLC5A3P53794 718 aa7.55□□□□□ -1.2
CDK5RAP3-209ENST00000578663 C21orf59P57076 290 aa7.55□□□□□ -1.2
CDK5RAP3-209ENST00000578663 ASIC1P78348 528 aa7.55□□□□□ -1.2
CDK5RAP3-209ENST00000578663 PDE4CQ08493 712 aa7.55□□□□□ -1.2
CDK5RAP3-209ENST00000578663 IFRD2Q12894 506 aaPredicted RBP7.55□□□□□ -1.2
CDK5RAP3-209ENST00000578663 DNAJC3Q13217 504 aa7.55□□□□□ -1.2
CDK5RAP3-209ENST00000578663 ZNF234Q14588 700 aa7.55□□□□□ -1.2
CDK5RAP3-209ENST00000578663 SFMBT2Q5VUG0 894 aa7.55□□□□□ -1.2
CDK5RAP3-209ENST00000578663 INO80CQ6PI98 192 aaPredicted RBP7.55□□□□□ -1.2
CDK5RAP3-209ENST00000578663 IGF2-ASQ6U949 168 aa7.55□□□□□ -1.2
CDK5RAP3-209ENST00000578663 XKR5Q6UX68 686 aa7.55□□□□□ -1.2
CDK5RAP3-209ENST00000578663 Q6ZNB5 142 aa7.55□□□□□ -1.2
CDK5RAP3-209ENST00000578663 TPGS1Q6ZTW0 290 aa7.55□□□□□ -1.2
CDK5RAP3-209ENST00000578663 HS2ST1Q7LGA3 356 aa7.55□□□□□ -1.2
CDK5RAP3-209ENST00000578663 ZNF720Q7Z2F6 126 aa7.55□□□□□ -1.2
CDK5RAP3-209ENST00000578663 ANKS1BQ7Z6G8 1248 aa7.55□□□□□ -1.2
CDK5RAP3-209ENST00000578663 OXR1Q8N573 874 aa7.55□□□□□ -1.2
CDK5RAP3-209ENST00000578663 RBBP8NLQ8NC74 664 aaPredicted RBP7.55□□□□□ -1.2
CDK5RAP3-209ENST00000578663 B3GALNT2Q8NCR0 500 aa7.55□□□□□ -1.2
CDK5RAP3-209ENST00000578663 ERLEC1Q96DZ1 483 aa7.55□□□□□ -1.2
CDK5RAP3-209ENST00000578663 EPSTI1Q96J88 318 aa7.55□□□□□ -1.2
CDK5RAP3-209ENST00000578663 ORAI3Q9BRQ5 295 aa7.55□□□□□ -1.2
CDK5RAP3-209ENST00000578663 STRA6Q9BX79 667 aa7.55□□□□□ -1.2
CDK5RAP3-209ENST00000578663 TRIM9Q9C026 710 aa7.55□□□□□ -1.2
CDK5RAP3-209ENST00000578663 SCAND2PQ9GZW5 306 aaPredicted RBP7.55□□□□□ -1.2
CDK5RAP3-209ENST00000578663 BTBD1Q9H0C5 482 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms