RNA–Protein interactions for RNA: ENST00000577572.5

SS18-206, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 510 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-206ENST00000577572 MTCL1Q9Y4B5 1905 aaKnown RBP15.82■□□□□ 0.12
SS18-206ENST00000577572 SYNJ2BP-COX16A0A087WUM0 186 aa15.82■□□□□ 0.12
SS18-206ENST00000577572 TRAV19A0A0A6YYK7 116 aa15.82■□□□□ 0.12
SS18-206ENST00000577572 SLC12A8A0AV02 714 aa15.82■□□□□ 0.12
SS18-206ENST00000577572 SPDYE4A6NLX3 237 aa15.82■□□□□ 0.12
SS18-206ENST00000577572 RFPL2O75678 378 aa15.82■□□□□ 0.12
SS18-206ENST00000577572 RHOP08100 348 aa15.82■□□□□ 0.12
SS18-206ENST00000577572 HDCP19113 662 aa15.82■□□□□ 0.12
SS18-206ENST00000577572 TGM2P21980 687 aa15.82■□□□□ 0.12
SS18-206ENST00000577572 IL4RP24394 825 aa15.82■□□□□ 0.12
SS18-206ENST00000577572 CHRNA3P32297 505 aa15.82■□□□□ 0.12
SS18-206ENST00000577572 NR2C2P49116 596 aa15.82■□□□□ 0.12
SS18-206ENST00000577572 SLC11A2P49281 568 aa15.82■□□□□ 0.12
SS18-206ENST00000577572 CCNG2Q16589 344 aa15.82■□□□□ 0.12
SS18-206ENST00000577572 GLE1Q53GS7 698 aaKnown RBP15.82■□□□□ 0.12
SS18-206ENST00000577572 RAB6CQ53S08 254 aa15.82■□□□□ 0.12
SS18-206ENST00000577572 SLC9A4Q6AI14 798 aa15.82■□□□□ 0.12
SS18-206ENST00000577572 CCDC70Q6NSX1 233 aa15.82■□□□□ 0.12
SS18-206ENST00000577572 BZW1Q7L1Q6 419 aaKnown RBP15.82■□□□□ 0.12
SS18-206ENST00000577572 RBM23Q86U06 439 aaKnown RBP15.82■□□□□ 0.12
SS18-206ENST00000577572 MMGT1Q8N4V1 131 aa15.82■□□□□ 0.12
SS18-206ENST00000577572 C12orf50Q8NA57 414 aaPredicted RBP15.82■□□□□ 0.12
SS18-206ENST00000577572 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.82■□□□□ 0.12
SS18-206ENST00000577572 ZNF707Q96C28 371 aaPredicted RBP15.82■□□□□ 0.12
SS18-206ENST00000577572 DDX50Q9BQ39 737 aaKnown RBP15.82■□□□□ 0.12
SS18-206ENST00000577572 RAB6CQ9H0N0 254 aa15.82■□□□□ 0.12
SS18-206ENST00000577572 ATXN3LQ9H3M9 355 aa15.82■□□□□ 0.12
SS18-206ENST00000577572 SLITRK6Q9H5Y7 841 aa15.82■□□□□ 0.12
SS18-206ENST00000577572 TASP1Q9H6P5 420 aa15.82■□□□□ 0.12
SS18-206ENST00000577572 LRRC19Q9H756 370 aa15.82■□□□□ 0.12
SS18-206ENST00000577572 COX16Q9P0S2 106 aa15.82■□□□□ 0.12
SS18-206ENST00000577572 STIM2Q9P246 746 aa15.82■□□□□ 0.12
SS18-206ENST00000577572 DNMT3BQ9UBC3 853 aaKnown RBP15.82■□□□□ 0.12
SS18-206ENST00000577572 OR12D3Q9UGF7 316 aa15.82■□□□□ 0.12
SS18-206ENST00000577572 ZNF510Q9Y2H8 683 aa15.82■□□□□ 0.12
SS18-206ENST00000577572 RAD54BQ9Y620 910 aa15.82■□□□□ 0.12
SS18-206ENST00000577572 PDE4DIPQ5VU43 2346 aa15.82■□□□□ 0.12
SS18-206ENST00000577572 PI4K2BG5E9Z4 385 aa15.81■□□□□ 0.12
SS18-206ENST00000577572 FGF10O15520 208 aaPredicted RBP15.81■□□□□ 0.12
SS18-206ENST00000577572 PAGE1O75459 146 aa15.81■□□□□ 0.12
SS18-206ENST00000577572 TBX18O95935 607 aa15.81■□□□□ 0.12
SS18-206ENST00000577572 HOXC13P31276 330 aa15.81■□□□□ 0.12
SS18-206ENST00000577572 FNTAP49354 379 aa15.81■□□□□ 0.12
SS18-206ENST00000577572 ANKRD20A8PQ5CZ79 823 aa15.81■□□□□ 0.12
SS18-206ENST00000577572 MIB1Q86YT6 1006 aa15.81■□□□□ 0.12
SS18-206ENST00000577572 VN1R2Q8NFZ6 395 aa15.81■□□□□ 0.12
SS18-206ENST00000577572 CSPG4P5Q96PW8 444 aa15.81■□□□□ 0.12
SS18-206ENST00000577572 KCTD15Q96SI1 283 aaPredicted RBP15.81■□□□□ 0.12
SS18-206ENST00000577572 KLF16Q9BXK1 252 aaPredicted RBP15.81■□□□□ 0.12
SS18-206ENST00000577572 PPARGC1AQ9UBK2 798 aaKnown RBP15.81■□□□□ 0.12
SS18-206ENST00000577572 STOML2Q9UJZ1 356 aa15.81■□□□□ 0.12
SS18-206ENST00000577572 NUDT5Q9UKK9 219 aa15.81■□□□□ 0.12
SS18-206ENST00000577572 ARHGAP26Q9UNA1 814 aa15.81■□□□□ 0.12
SS18-206ENST00000577572 ZNF638Q14966 1978 aaKnown RBP15.8■□□□□ 0.12
SS18-206ENST00000577572 MYO16Q9Y6X6 1858 aa15.8■□□□□ 0.12
SS18-206ENST00000577572 APOC4-APOC2K7ER74 178 aa15.8■□□□□ 0.12
SS18-206ENST00000577572 EEF2KO00418 725 aaKnown RBP15.8■□□□□ 0.12
SS18-206ENST00000577572 APOL1O14791 398 aa15.8■□□□□ 0.12
SS18-206ENST00000577572 MSI1O43347 362 aaKnown RBP15.8■□□□□ 0.12
SS18-206ENST00000577572 APOC2P02655 101 aa15.8■□□□□ 0.12
SS18-206ENST00000577572 TUBBP07437 444 aa15.8■□□□□ 0.12
SS18-206ENST00000577572 CD48P09326 243 aa15.8■□□□□ 0.12
SS18-206ENST00000577572 MYL4P12829 197 aa15.8■□□□□ 0.12
SS18-206ENST00000577572 TCF3P15923 654 aa15.8■□□□□ 0.12
SS18-206ENST00000577572 LMNB2Q03252 620 aa15.8■□□□□ 0.12
SS18-206ENST00000577572 HYAL1Q12794 435 aa15.8■□□□□ 0.12
SS18-206ENST00000577572 CA9Q16790 459 aa15.8■□□□□ 0.12
SS18-206ENST00000577572 PPP6R3Q5H9R7 873 aaPredicted RBP15.8■□□□□ 0.12
SS18-206ENST00000577572 PRSS36Q5K4E3 855 aa15.8■□□□□ 0.12
SS18-206ENST00000577572 LRRC31Q6UY01 552 aa15.8■□□□□ 0.12
SS18-206ENST00000577572 MAATS1Q7Z4T9 603 aa15.8■□□□□ 0.12
SS18-206ENST00000577572 HS6ST3Q8IZP7 471 aa15.8■□□□□ 0.12
SS18-206ENST00000577572 SHKBP1Q8TBC3 707 aa15.8■□□□□ 0.12
SS18-206ENST00000577572 SMG7Q92540 1137 aaKnown RBP15.8■□□□□ 0.12
SS18-206ENST00000577572 RNF38Q9H0F5 515 aa15.8■□□□□ 0.12
SS18-206ENST00000577572 CATSPERBQ9H7T0 1116 aa15.8■□□□□ 0.12
SS18-206ENST00000577572 PIDD1Q9HB75 910 aa15.8■□□□□ 0.12
SS18-206ENST00000577572 KLHL11Q9NVR0 708 aa15.8■□□□□ 0.12
SS18-206ENST00000577572 CWC15Q9P013 229 aaKnown RBP15.8■□□□□ 0.12
SS18-206ENST00000577572 A0A1W2PRU2 124 aa15.79■□□□□ 0.12
SS18-206ENST00000577572 C2orf78A6NCI8 922 aa15.79■□□□□ 0.12
SS18-206ENST00000577572 I6L893 689 aaPredicted RBP15.79■□□□□ 0.12
SS18-206ENST00000577572 CST8O60676 142 aa15.79■□□□□ 0.12
SS18-206ENST00000577572 PHF2O75151 1096 aa15.79■□□□□ 0.12
SS18-206ENST00000577572 CSPG5O95196 566 aa15.79■□□□□ 0.12
SS18-206ENST00000577572 MBL2P11226 248 aaPredicted RBP15.79■□□□□ 0.12
SS18-206ENST00000577572 TPI1P60174 286 aa15.79■□□□□ 0.12
SS18-206ENST00000577572 ADAM15Q13444 863 aa15.79■□□□□ 0.12
SS18-206ENST00000577572 DPYSQ14117 519 aa15.79■□□□□ 0.12
SS18-206ENST00000577572 COL19A1Q14993 1142 aa15.79■□□□□ 0.12
SS18-206ENST00000577572 SIX1Q15475 284 aaPredicted RBP15.79■□□□□ 0.12
SS18-206ENST00000577572 C5orf22Q49AR2 442 aa15.79■□□□□ 0.12
SS18-206ENST00000577572 TCEAL5Q5H9L2 206 aa15.79■□□□□ 0.12
SS18-206ENST00000577572 MANEALQ5VSG8 457 aa15.79■□□□□ 0.12
SS18-206ENST00000577572 PRPF38BQ5VTL8 546 aaKnown RBP15.79■□□□□ 0.12
SS18-206ENST00000577572 GPR153Q6NV75 609 aa15.79■□□□□ 0.12
SS18-206ENST00000577572 AADACL2Q6P093 401 aa15.79■□□□□ 0.12
SS18-206ENST00000577572 RFX8Q6ZV50 586 aa15.79■□□□□ 0.12
SS18-206ENST00000577572 SYDE1Q6ZW31 735 aaPredicted RBP15.79■□□□□ 0.12
SS18-206ENST00000577572 GPR149Q86SP6 731 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms