RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 DNTTP04053 509 aa13.99□□□□□ -0.17
COPS3-214ENST00000577246 HMBSP08397 361 aa13.99□□□□□ -0.17
COPS3-214ENST00000577246 C1SP09871 688 aa13.99□□□□□ -0.17
COPS3-214ENST00000577246 SYT1P21579 422 aa13.99□□□□□ -0.17
COPS3-214ENST00000577246 ACSL1P33121 698 aa13.99□□□□□ -0.17
COPS3-214ENST00000577246 EFEMP1Q12805 493 aa13.99□□□□□ -0.17
COPS3-214ENST00000577246 SFSWAPQ12872 951 aaKnown RBP13.99□□□□□ -0.17
COPS3-214ENST00000577246 CUL4AQ13619 759 aa13.99□□□□□ -0.17
COPS3-214ENST00000577246 FNDC3BQ53EP0 1204 aaKnown RBP13.99□□□□□ -0.17
COPS3-214ENST00000577246 MPPE1Q53F39 396 aa13.99□□□□□ -0.17
COPS3-214ENST00000577246 DHRS13Q6UX07 377 aa13.99□□□□□ -0.17
COPS3-214ENST00000577246 DENND1CQ8IV53 801 aa13.99□□□□□ -0.17
COPS3-214ENST00000577246 SLC9A9Q8IVB4 645 aa13.99□□□□□ -0.17
COPS3-214ENST00000577246 PIP4K2CQ8TBX8 421 aa13.99□□□□□ -0.17
COPS3-214ENST00000577246 PLEKHO2Q8TD55 490 aa13.99□□□□□ -0.17
COPS3-214ENST00000577246 TMEM174Q8WUU8 243 aa13.99□□□□□ -0.17
COPS3-214ENST00000577246 SLC39A7Q92504 469 aa13.99□□□□□ -0.17
COPS3-214ENST00000577246 PLD4Q96BZ4 506 aa13.99□□□□□ -0.17
COPS3-214ENST00000577246 ACE2Q9BYF1 805 aaPredicted RBP13.99□□□□□ -0.17
COPS3-214ENST00000577246 SLC39A2Q9NP94 309 aa13.99□□□□□ -0.17
COPS3-214ENST00000577246 MARCH2Q9P0N8 246 aa13.99□□□□□ -0.17
COPS3-214ENST00000577246 USP3Q9Y6I4 520 aa13.99□□□□□ -0.17
COPS3-214ENST00000577246 CELSR3Q9NYQ7 3312 aa13.99□□□□□ -0.17
COPS3-214ENST00000577246 PLXNB3Q9ULL4 1909 aa13.99□□□□□ -0.17
COPS3-214ENST00000577246 GCN1Q92616 2671 aaKnown RBP13.98□□□□□ -0.17
COPS3-214ENST00000577246 APC2O95996 2303 aa13.98□□□□□ -0.17
COPS3-214ENST00000577246 ACACAQ13085 2346 aa13.98□□□□□ -0.17
COPS3-214ENST00000577246 CAPN9O14815 690 aa13.98□□□□□ -0.17
COPS3-214ENST00000577246 ATXN7O15265 892 aaPredicted RBP13.98□□□□□ -0.17
COPS3-214ENST00000577246 SPTLC2O15270 562 aa13.98□□□□□ -0.17
COPS3-214ENST00000577246 YKT6O15498 198 aa13.98□□□□□ -0.17
COPS3-214ENST00000577246 TSPAN3O60637 253 aa13.98□□□□□ -0.17
COPS3-214ENST00000577246 FSBPO95073 299 aa13.98□□□□□ -0.17
COPS3-214ENST00000577246 C7P10643 843 aa13.98□□□□□ -0.17
COPS3-214ENST00000577246 JUPP14923 745 aa13.98□□□□□ -0.17
COPS3-214ENST00000577246 CTSKP43235 329 aa13.98□□□□□ -0.17
COPS3-214ENST00000577246 HARS2P49590 506 aaKnown RBP13.98□□□□□ -0.17
COPS3-214ENST00000577246 SLC8A3P57103 927 aa13.98□□□□□ -0.17
COPS3-214ENST00000577246 SCD5Q86SK9 330 aa13.98□□□□□ -0.17
COPS3-214ENST00000577246 MARCH9Q86YJ5 346 aa13.98□□□□□ -0.17
COPS3-214ENST00000577246 RBBP8NLQ8NC74 664 aaPredicted RBP13.98□□□□□ -0.17
COPS3-214ENST00000577246 LINC00301Q8NCQ3 95 aa13.98□□□□□ -0.17
COPS3-214ENST00000577246 CCDC150Q8NCX0 1101 aa13.98□□□□□ -0.17
COPS3-214ENST00000577246 TMC2Q8TDI7 906 aa13.98□□□□□ -0.17
COPS3-214ENST00000577246 SORCS1Q8WY21 1168 aa13.98□□□□□ -0.17
COPS3-214ENST00000577246 BAP1Q92560 729 aa13.98□□□□□ -0.17
COPS3-214ENST00000577246 BIRC7Q96CA5 298 aa13.98□□□□□ -0.17
COPS3-214ENST00000577246 DUSP16Q9BY84 665 aa13.98□□□□□ -0.17
COPS3-214ENST00000577246 BACH2Q9BYV9 841 aa13.98□□□□□ -0.17
COPS3-214ENST00000577246 SCML1Q9UN30 329 aa13.98□□□□□ -0.17
COPS3-214ENST00000577246 NCKAP1Q9Y2A7 1128 aa13.98□□□□□ -0.17
COPS3-214ENST00000577246 FRMD4BQ9Y2L6 1034 aa13.98□□□□□ -0.17
COPS3-214ENST00000577246 SLC12A8A0AV02 714 aa13.97□□□□□ -0.17
COPS3-214ENST00000577246 CAPN8A6NHC0 703 aa13.97□□□□□ -0.17
COPS3-214ENST00000577246 H0Y8X5 98 aa13.97□□□□□ -0.17
COPS3-214ENST00000577246 PLK4O00444 970 aa13.97□□□□□ -0.17
COPS3-214ENST00000577246 ATP5BP06576 529 aaKnown RBP13.97□□□□□ -0.17
COPS3-214ENST00000577246 RACK1P63244 317 aaKnown RBP13.97□□□□□ -0.17
COPS3-214ENST00000577246 SV2AQ7L0J3 742 aa13.97□□□□□ -0.17
COPS3-214ENST00000577246 FAM217AQ8IXS0 508 aa13.97□□□□□ -0.17
COPS3-214ENST00000577246 AHI1Q8N157 1196 aa13.97□□□□□ -0.17
COPS3-214ENST00000577246 TTC39CQ8N584 583 aa13.97□□□□□ -0.17
COPS3-214ENST00000577246 ZNF557Q8N988 423 aaPredicted RBP13.97□□□□□ -0.17
COPS3-214ENST00000577246 ELMO3Q96BJ8 720 aa13.97□□□□□ -0.17
COPS3-214ENST00000577246 P2RY11Q96G91 374 aa13.97□□□□□ -0.17
COPS3-214ENST00000577246 ZNF396Q96N95 335 aaPredicted RBP13.97□□□□□ -0.17
COPS3-214ENST00000577246 TMEM245Q9H330 911 aa13.97□□□□□ -0.17
COPS3-214ENST00000577246 OLA1Q9NTK5 396 aaKnown RBP13.97□□□□□ -0.17
COPS3-214ENST00000577246 A0A1B0GTQ1 180 aa13.96□□□□□ -0.17
COPS3-214ENST00000577246 ENC1O14682 589 aa13.96□□□□□ -0.17
COPS3-214ENST00000577246 VILLO15195 856 aa13.96□□□□□ -0.17
COPS3-214ENST00000577246 CUTAO60888 179 aa13.96□□□□□ -0.17
COPS3-214ENST00000577246 RFPL3O75679 317 aa13.96□□□□□ -0.17
COPS3-214ENST00000577246 HLA-DRAP01903 254 aa13.96□□□□□ -0.17
COPS3-214ENST00000577246 ABCB4P21439 1286 aa13.96□□□□□ -0.17
COPS3-214ENST00000577246 EIF2S3P41091 472 aaKnown RBP13.96□□□□□ -0.17
COPS3-214ENST00000577246 TMEM215Q68D42 235 aa13.96□□□□□ -0.17
COPS3-214ENST00000577246 ZNF776Q68DI1 518 aaPredicted RBP13.96□□□□□ -0.17
COPS3-214ENST00000577246 SPOPLQ6IQ16 392 aa13.96□□□□□ -0.17
COPS3-214ENST00000577246 CRELD1Q96HD1 420 aa13.96□□□□□ -0.17
COPS3-214ENST00000577246 TWNKQ96RR1 684 aa13.96□□□□□ -0.17
COPS3-214ENST00000577246 UBXN6Q9BZV1 441 aa13.96□□□□□ -0.17
COPS3-214ENST00000577246 NRSN2Q9GZP1 204 aa13.96□□□□□ -0.17
COPS3-214ENST00000577246 NIF3L1Q9GZT8 377 aa13.96□□□□□ -0.17
COPS3-214ENST00000577246 DMAC2Q9NW81 257 aa13.96□□□□□ -0.17
COPS3-214ENST00000577246 SUN2Q9UH99 717 aa13.96□□□□□ -0.17
COPS3-214ENST00000577246 TPX2Q9ULW0 747 aaKnown RBP13.96□□□□□ -0.17
COPS3-214ENST00000577246 AK5Q9Y6K8 562 aa13.96□□□□□ -0.17
COPS3-214ENST00000577246 PTPRBP23467 1997 aa13.96□□□□□ -0.18
COPS3-214ENST00000577246 KCNK3O14649 394 aa13.95□□□□□ -0.18
COPS3-214ENST00000577246 POLR2DO15514 142 aaKnown RBP13.95□□□□□ -0.18
COPS3-214ENST00000577246 RNASEH1O60930 286 aaKnown RBP13.95□□□□□ -0.18
COPS3-214ENST00000577246 ZIC2O95409 532 aaPredicted RBP13.95□□□□□ -0.18
COPS3-214ENST00000577246 LDOC1O95751 146 aaPredicted RBP13.95□□□□□ -0.18
COPS3-214ENST00000577246 LATS1O95835 1130 aa13.95□□□□□ -0.18
COPS3-214ENST00000577246 ITGAVP06756 1048 aa13.95□□□□□ -0.18
COPS3-214ENST00000577246 DLDP09622 509 aaKnown RBP13.95□□□□□ -0.18
COPS3-214ENST00000577246 SLFN14P0C7P3 912 aa13.95□□□□□ -0.18
COPS3-214ENST00000577246 CD58P19256 250 aa13.95□□□□□ -0.18
COPS3-214ENST00000577246 HOXD9P28356 352 aaPredicted RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms