RNA–Protein interactions for RNA: ENST00000575214.1

HCFC1R1-208, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 1,365 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-208ENST00000575214 SLC39A13Q96H72 371 aa21.53■■□□□ 1.04
HCFC1R1-208ENST00000575214 SEPT11Q9NVA2 429 aaKnown RBP21.53■■□□□ 1.04
HCFC1R1-208ENST00000575214 COX16Q9P0S2 106 aa21.53■■□□□ 1.04
HCFC1R1-208ENST00000575214 IGLV3-25P01717 112 aa21.52■■□□□ 1.04
HCFC1R1-208ENST00000575214 FERP16591 822 aa21.52■■□□□ 1.04
HCFC1R1-208ENST00000575214 GBP1P32455 592 aa21.52■■□□□ 1.04
HCFC1R1-208ENST00000575214 MRE11P49959 708 aa21.52■■□□□ 1.04
HCFC1R1-208ENST00000575214 UBASH3AP57075 661 aa21.52■■□□□ 1.04
HCFC1R1-208ENST00000575214 DMWDQ09019 674 aa21.52■■□□□ 1.04
HCFC1R1-208ENST00000575214 DMC1Q14565 340 aa21.52■■□□□ 1.04
HCFC1R1-208ENST00000575214 ZC3H12AQ5D1E8 599 aaKnown RBP21.52■■□□□ 1.04
HCFC1R1-208ENST00000575214 EMC10Q5UCC4 262 aa21.52■■□□□ 1.04
HCFC1R1-208ENST00000575214 ALYREFQ86V81 257 aaKnown RBP21.52■■□□□ 1.04
HCFC1R1-208ENST00000575214 CCDC33Q8N5R6 958 aa21.52■■□□□ 1.04
HCFC1R1-208ENST00000575214 ALLCQ8N6M5 410 aa21.52■■□□□ 1.04
HCFC1R1-208ENST00000575214 ZBTB44Q8NCP5 570 aa21.52■■□□□ 1.04
HCFC1R1-208ENST00000575214 NKD2Q969F2 451 aaPredicted RBP21.52■■□□□ 1.04
HCFC1R1-208ENST00000575214 AZIN2Q96A70 460 aa21.52■■□□□ 1.04
HCFC1R1-208ENST00000575214 TMA16Q96EY4 203 aaKnown RBP21.52■■□□□ 1.04
HCFC1R1-208ENST00000575214 HHIPQ96QV1 700 aa21.52■■□□□ 1.04
HCFC1R1-208ENST00000575214 DDX50Q9BQ39 737 aaKnown RBP21.52■■□□□ 1.04
HCFC1R1-208ENST00000575214 TSPY26PQ9H489 355 aa21.52■■□□□ 1.04
HCFC1R1-208ENST00000575214 DDIT4Q9NX09 232 aa21.52■■□□□ 1.04
HCFC1R1-208ENST00000575214 MYO6Q9UM54 1294 aa21.52■■□□□ 1.04
HCFC1R1-208ENST00000575214 ATG2BQ96BY7 2078 aa21.51■■□□□ 1.03
HCFC1R1-208ENST00000575214 KIAA1549LQ6ZVL6 1849 aa21.51■■□□□ 1.03
HCFC1R1-208ENST00000575214 GOLGA6L7A0A1B0GV03 622 aa21.51■■□□□ 1.03
HCFC1R1-208ENST00000575214 GOLGA8SH3BPF8 625 aa21.51■■□□□ 1.03
HCFC1R1-208ENST00000575214 KLF8O95600 359 aaPredicted RBP21.51■■□□□ 1.03
HCFC1R1-208ENST00000575214 CISD3P0C7P0 127 aa21.51■■□□□ 1.03
HCFC1R1-208ENST00000575214 HOXC13P31276 330 aa21.51■■□□□ 1.03
HCFC1R1-208ENST00000575214 NOS2P35228 1153 aa21.51■■□□□ 1.03
HCFC1R1-208ENST00000575214 SCNN1AP37088 669 aa21.51■■□□□ 1.03
HCFC1R1-208ENST00000575214 KIR2DL1P43626 348 aaPredicted RBP21.51■■□□□ 1.03
HCFC1R1-208ENST00000575214 FNTBP49356 437 aa21.51■■□□□ 1.03
HCFC1R1-208ENST00000575214 FAM133BQ5BKY9 247 aaKnown RBP21.51■■□□□ 1.03
HCFC1R1-208ENST00000575214 RFWD3Q6PCD5 774 aa21.51■■□□□ 1.03
HCFC1R1-208ENST00000575214 BAP1Q92560 729 aa21.51■■□□□ 1.03
HCFC1R1-208ENST00000575214 RNF34Q969K3 372 aa21.51■■□□□ 1.03
HCFC1R1-208ENST00000575214 ZDHHC4Q9NPG8 344 aa21.51■■□□□ 1.03
HCFC1R1-208ENST00000575214 FBXO10Q9UK96 956 aa21.51■■□□□ 1.03
HCFC1R1-208ENST00000575214 MMP17Q9ULZ9 603 aa21.51■■□□□ 1.03
HCFC1R1-208ENST00000575214 LRRC53A6NM62 1247 aa21.5■■□□□ 1.03
HCFC1R1-208ENST00000575214 HOXD9P28356 352 aaPredicted RBP21.5■■□□□ 1.03
HCFC1R1-208ENST00000575214 SLC6A4P31645 630 aa21.5■■□□□ 1.03
HCFC1R1-208ENST00000575214 MATKP42679 507 aa21.5■■□□□ 1.03
HCFC1R1-208ENST00000575214 PXNP49023 591 aaPredicted RBP21.5■■□□□ 1.03
HCFC1R1-208ENST00000575214 HSF5Q4G112 596 aaPredicted RBP21.5■■□□□ 1.03
HCFC1R1-208ENST00000575214 NADSYN1Q6IA69 706 aa21.5■■□□□ 1.03
HCFC1R1-208ENST00000575214 MMS22LQ6ZRQ5 1243 aa21.5■■□□□ 1.03
HCFC1R1-208ENST00000575214 ZNF513Q8N8E2 541 aaPredicted RBP21.5■■□□□ 1.03
HCFC1R1-208ENST00000575214 IL17RCQ8NAC3 791 aa21.5■■□□□ 1.03
HCFC1R1-208ENST00000575214 TXNDC5Q8NBS9 432 aaKnown RBP21.5■■□□□ 1.03
HCFC1R1-208ENST00000575214 SLC30A5Q8TAD4 765 aa21.5■■□□□ 1.03
HCFC1R1-208ENST00000575214 PCDHB18PQ96TA0 734 aa21.5■■□□□ 1.03
HCFC1R1-208ENST00000575214 AGPAT1Q99943 283 aa21.5■■□□□ 1.03
HCFC1R1-208ENST00000575214 SEMA4AQ9H3S1 761 aa21.5■■□□□ 1.03
HCFC1R1-208ENST00000575214 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.5■■□□□ 1.03
HCFC1R1-208ENST00000575214 STAP1Q9ULZ2 295 aa21.5■■□□□ 1.03
HCFC1R1-208ENST00000575214 ZFHX2Q9C0A1 2572 aaPredicted RBP21.5■■□□□ 1.03
HCFC1R1-208ENST00000575214 PRRT4C9JH25 899 aa21.49■■□□□ 1.03
HCFC1R1-208ENST00000575214 GFRA2O00451 464 aa21.49■■□□□ 1.03
HCFC1R1-208ENST00000575214 SLC2A3P11169 496 aa21.49■■□□□ 1.03
HCFC1R1-208ENST00000575214 MMP8P22894 467 aa21.49■■□□□ 1.03
HCFC1R1-208ENST00000575214 HOXA6P31267 233 aa21.49■■□□□ 1.03
HCFC1R1-208ENST00000575214 NSFP46459 744 aaKnown RBP21.49■■□□□ 1.03
HCFC1R1-208ENST00000575214 SGSHP51688 502 aa21.49■■□□□ 1.03
HCFC1R1-208ENST00000575214 NME3Q13232 169 aa21.49■■□□□ 1.03
HCFC1R1-208ENST00000575214 PIK3R6Q5UE93 754 aa21.49■■□□□ 1.03
HCFC1R1-208ENST00000575214 LRSAM1Q6UWE0 723 aa21.49■■□□□ 1.03
HCFC1R1-208ENST00000575214 TRMT11Q7Z4G4 463 aaKnown RBP21.49■■□□□ 1.03
HCFC1R1-208ENST00000575214 LONP2Q86WA8 852 aa21.49■■□□□ 1.03
HCFC1R1-208ENST00000575214 CAMKK1Q8N5S9 505 aa21.49■■□□□ 1.03
HCFC1R1-208ENST00000575214 ATP6V0D2Q8N8Y2 350 aa21.49■■□□□ 1.03
HCFC1R1-208ENST00000575214 BTN2A3PQ96KV6 586 aa21.49■■□□□ 1.03
HCFC1R1-208ENST00000575214 C11orf70Q9BRQ4 267 aa21.49■■□□□ 1.03
HCFC1R1-208ENST00000575214 NUCKS1Q9H1E3 243 aaKnown RBP21.49■■□□□ 1.03
HCFC1R1-208ENST00000575214 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.49■■□□□ 1.03
HCFC1R1-208ENST00000575214 RRN3Q9NYV6 651 aa21.49■■□□□ 1.03
HCFC1R1-208ENST00000575214 SLC12A6Q9UHW9 1150 aa21.49■■□□□ 1.03
HCFC1R1-208ENST00000575214 XPO7Q9UIA9 1087 aaKnown RBP21.49■■□□□ 1.03
HCFC1R1-208ENST00000575214 CLEC4EQ9ULY5 219 aa21.49■■□□□ 1.03
HCFC1R1-208ENST00000575214 SLC27A6Q9Y2P4 619 aa21.49■■□□□ 1.03
HCFC1R1-208ENST00000575214 TYW5A2RUC4 315 aaKnown RBP21.48■■□□□ 1.03
HCFC1R1-208ENST00000575214 M0QYT0 321 aa21.48■■□□□ 1.03
HCFC1R1-208ENST00000575214 GFRA3O60609 400 aa21.48■■□□□ 1.03
HCFC1R1-208ENST00000575214 TBL1XO60907 577 aa21.48■■□□□ 1.03
HCFC1R1-208ENST00000575214 LILRB5O75023 590 aa21.48■■□□□ 1.03
HCFC1R1-208ENST00000575214 CHRM1P11229 460 aaPredicted RBP21.48■■□□□ 1.03
HCFC1R1-208ENST00000575214 UNGP13051 313 aaPredicted RBP21.48■■□□□ 1.03
HCFC1R1-208ENST00000575214 ABCB4P21439 1286 aa21.48■■□□□ 1.03
HCFC1R1-208ENST00000575214 CCR1P32246 355 aa21.48■■□□□ 1.03
HCFC1R1-208ENST00000575214 SULT1E1P49888 294 aa21.48■■□□□ 1.03
HCFC1R1-208ENST00000575214 EIF4EBP2Q13542 120 aaPredicted RBP21.48■■□□□ 1.03
HCFC1R1-208ENST00000575214 ASIC2Q16515 512 aa21.48■■□□□ 1.03
HCFC1R1-208ENST00000575214 CLEC16AQ2KHT3 1053 aa21.48■■□□□ 1.03
HCFC1R1-208ENST00000575214 EOGTQ5NDL2 527 aa21.48■■□□□ 1.03
HCFC1R1-208ENST00000575214 ANKS1BQ7Z6G8 1248 aa21.48■■□□□ 1.03
HCFC1R1-208ENST00000575214 CHSY1Q86X52 802 aa21.48■■□□□ 1.03
HCFC1R1-208ENST00000575214 TSTD1Q8NFU3 115 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms