RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 SLC18A1P54219 525 aa14.51□□□□□ -0.09
VPS33B-208ENST00000574755 FAM26DQ5JW98 314 aa14.51□□□□□ -0.09
VPS33B-208ENST00000574755 ANKRD20A2Q5SQ80 823 aa14.51□□□□□ -0.09
VPS33B-208ENST00000574755 ANKRD20A1Q5TYW2 823 aa14.51□□□□□ -0.09
VPS33B-208ENST00000574755 ANKRD20A3Q5VUR7 823 aa14.51□□□□□ -0.09
VPS33B-208ENST00000574755 OVOS1Q6IE37 1185 aa14.51□□□□□ -0.09
VPS33B-208ENST00000574755 FAM171BQ6P995 826 aa14.51□□□□□ -0.09
VPS33B-208ENST00000574755 DENND5BQ6ZUT9 1274 aa14.51□□□□□ -0.09
VPS33B-208ENST00000574755 RFX8Q6ZV50 586 aa14.51□□□□□ -0.09
VPS33B-208ENST00000574755 ECHDC2Q86YB7 292 aa14.51□□□□□ -0.09
VPS33B-208ENST00000574755 CCNYQ8ND76 341 aa14.51□□□□□ -0.09
VPS33B-208ENST00000574755 MCUQ8NE86 351 aa14.51□□□□□ -0.09
VPS33B-208ENST00000574755 RSPH1Q8WYR4 309 aa14.51□□□□□ -0.09
VPS33B-208ENST00000574755 MYO18AQ92614 2054 aaKnown RBP14.51□□□□□ -0.09
VPS33B-208ENST00000574755 UROC1Q96N76 676 aa14.51□□□□□ -0.09
VPS33B-208ENST00000574755 FERMT1Q9BQL6 677 aa14.51□□□□□ -0.09
VPS33B-208ENST00000574755 RASSF4Q9H2L5 321 aa14.51□□□□□ -0.09
VPS33B-208ENST00000574755 WDR6Q9NNW5 1121 aaKnown RBP14.51□□□□□ -0.09
VPS33B-208ENST00000574755 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.51□□□□□ -0.09
VPS33B-208ENST00000574755 M0QZQ0 153 aa14.51□□□□□ -0.09
VPS33B-208ENST00000574755 SNX3O60493 162 aa14.51□□□□□ -0.09
VPS33B-208ENST00000574755 ASMTLO95671 621 aa14.51□□□□□ -0.09
VPS33B-208ENST00000574755 ITGB1P05556 798 aa14.51□□□□□ -0.09
VPS33B-208ENST00000574755 INHBAP08476 426 aa14.51□□□□□ -0.09
VPS33B-208ENST00000574755 TPSB2P20231 275 aa14.51□□□□□ -0.09
VPS33B-208ENST00000574755 CBLBQ13191 982 aa14.51□□□□□ -0.09
VPS33B-208ENST00000574755 SPARCL1Q14515 664 aa14.51□□□□□ -0.09
VPS33B-208ENST00000574755 ITIH4Q14624 930 aa14.51□□□□□ -0.09
VPS33B-208ENST00000574755 TPSAB1Q15661 275 aa14.51□□□□□ -0.09
VPS33B-208ENST00000574755 CD300LGQ6UXG3 332 aa14.51□□□□□ -0.09
VPS33B-208ENST00000574755 SMC1BQ8NDV3 1235 aa14.51□□□□□ -0.09
VPS33B-208ENST00000574755 PPM1EQ8WY54 764 aa14.51□□□□□ -0.09
VPS33B-208ENST00000574755 NTAN1Q96AB6 310 aa14.51□□□□□ -0.09
VPS33B-208ENST00000574755 GLT1D1Q96MS3 346 aa14.51□□□□□ -0.09
VPS33B-208ENST00000574755 SF3B1O75533 1304 aaKnown RBP eCLIP14.5□□□□□ -0.098e-6■■■■■ 107
VPS33B-208ENST00000574755 A0A0A0MRY4 1105 aa14.5□□□□□ -0.09
VPS33B-208ENST00000574755 FAM72CH0Y354 149 aa14.5□□□□□ -0.09
VPS33B-208ENST00000574755 TYROBPO43914 113 aa14.5□□□□□ -0.09
VPS33B-208ENST00000574755 STK10O94804 968 aaKnown RBP14.5□□□□□ -0.09
VPS33B-208ENST00000574755 CPP00450 1065 aa14.5□□□□□ -0.09
VPS33B-208ENST00000574755 SEMA5AQ13591 1074 aa14.5□□□□□ -0.09
VPS33B-208ENST00000574755 DPYSQ14117 519 aa14.5□□□□□ -0.09
VPS33B-208ENST00000574755 PDK1Q15118 436 aa14.5□□□□□ -0.09
VPS33B-208ENST00000574755 ARL13BQ3SXY8 428 aa14.5□□□□□ -0.09
VPS33B-208ENST00000574755 FAM72AQ5TYM5 149 aa14.5□□□□□ -0.09
VPS33B-208ENST00000574755 FAM72DQ6L9T8 149 aa14.5□□□□□ -0.09
VPS33B-208ENST00000574755 FAM72BQ86X60 149 aa14.5□□□□□ -0.09
VPS33B-208ENST00000574755 MICALL1Q8N3F8 863 aa14.5□□□□□ -0.09
VPS33B-208ENST00000574755 OR10T2Q8NGX3 314 aa14.5□□□□□ -0.09
VPS33B-208ENST00000574755 DENND1AQ8TEH3 1009 aa14.5□□□□□ -0.09
VPS33B-208ENST00000574755 LRRC39Q96DD0 335 aa14.5□□□□□ -0.09
VPS33B-208ENST00000574755 PGAP3Q96FM1 320 aaPredicted RBP14.5□□□□□ -0.09
VPS33B-208ENST00000574755 P2RY11Q96G91 374 aa14.5□□□□□ -0.09
VPS33B-208ENST00000574755 SPATA13Q96N96 652 aa14.5□□□□□ -0.09
VPS33B-208ENST00000574755 TMEM209Q96SK2 561 aa14.5□□□□□ -0.09
VPS33B-208ENST00000574755 DMAP1Q9NPF5 467 aaPredicted RBP14.5□□□□□ -0.09
VPS33B-208ENST00000574755 ANLNQ9NQW6 1124 aa14.5□□□□□ -0.09
VPS33B-208ENST00000574755 TMLHEQ9NVH6 421 aa14.5□□□□□ -0.09
VPS33B-208ENST00000574755 RRN3Q9NYV6 651 aa14.5□□□□□ -0.09
VPS33B-208ENST00000574755 SRRDQ9UH36 339 aa14.5□□□□□ -0.09
VPS33B-208ENST00000574755 FBXW11Q9UKB1 542 aa14.5□□□□□ -0.09
VPS33B-208ENST00000574755 IQANK1A0A1B0GTG1 560 aa14.49□□□□□ -0.09
VPS33B-208ENST00000574755 F5H423 210 aaPredicted RBP14.49□□□□□ -0.09
VPS33B-208ENST00000574755 F8W810 466 aa14.49□□□□□ -0.09
VPS33B-208ENST00000574755 RNF103O00237 685 aa14.49□□□□□ -0.09
VPS33B-208ENST00000574755 PPP1R12AO14974 1030 aaPredicted RBP14.49□□□□□ -0.09
VPS33B-208ENST00000574755 CKBP12277 381 aa14.49□□□□□ -0.09
VPS33B-208ENST00000574755 TPI1P60174 286 aa14.49□□□□□ -0.09
VPS33B-208ENST00000574755 SCAPQ12770 1279 aa14.49□□□□□ -0.09
VPS33B-208ENST00000574755 PAFAH1B3Q15102 231 aaKnown RBP14.49□□□□□ -0.09
VPS33B-208ENST00000574755 PRKD1Q15139 912 aaPredicted RBP14.49□□□□□ -0.09
VPS33B-208ENST00000574755 ZNF534Q76KX8 674 aa14.49□□□□□ -0.09
VPS33B-208ENST00000574755 BHLHA9Q7RTU4 235 aa14.49□□□□□ -0.09
VPS33B-208ENST00000574755 ZNF598Q86UK7 904 aaKnown RBP14.49□□□□□ -0.09
VPS33B-208ENST00000574755 THEM5Q8N1Q8 247 aa14.49□□□□□ -0.09
VPS33B-208ENST00000574755 COLGALT1Q8NBJ5 622 aa14.49□□□□□ -0.09
VPS33B-208ENST00000574755 MZB1Q8WU39 189 aa14.49□□□□□ -0.09
VPS33B-208ENST00000574755 SLC44A1Q8WWI5 657 aa14.49□□□□□ -0.09
VPS33B-208ENST00000574755 COLEC11Q9BWP8 271 aa14.49□□□□□ -0.09
VPS33B-208ENST00000574755 SSU72Q9NP77 194 aaKnown RBP14.49□□□□□ -0.09
VPS33B-208ENST00000574755 SEPT10Q9P0V9 454 aa14.49□□□□□ -0.09
VPS33B-208ENST00000574755 MAD1L1Q9Y6D9 718 aa14.49□□□□□ -0.09
VPS33B-208ENST00000574755 SQORQ9Y6N5 450 aa14.49□□□□□ -0.09
VPS33B-208ENST00000574755 I6L893 689 aaPredicted RBP14.49□□□□□ -0.09
VPS33B-208ENST00000574755 GOLGA8RI6L899 631 aa14.49□□□□□ -0.09
VPS33B-208ENST00000574755 F9P00740 461 aa14.49□□□□□ -0.09
VPS33B-208ENST00000574755 SARNPP82979 210 aaKnown RBP14.49□□□□□ -0.09
VPS33B-208ENST00000574755 TSPY1Q01534 308 aa14.49□□□□□ -0.09
VPS33B-208ENST00000574755 MAPRE1Q15691 268 aaKnown RBP14.49□□□□□ -0.09
VPS33B-208ENST00000574755 MAP3K21Q5TCX8 1036 aa14.49□□□□□ -0.09
VPS33B-208ENST00000574755 DCLRE1AQ6PJP8 1040 aa14.49□□□□□ -0.09
VPS33B-208ENST00000574755 PRPF39Q86UA1 669 aaKnown RBP14.49□□□□□ -0.09
VPS33B-208ENST00000574755 LRRTM3Q86VH5 581 aa14.49□□□□□ -0.09
VPS33B-208ENST00000574755 CTAGE3PQ8IX95 158 aa14.49□□□□□ -0.09
VPS33B-208ENST00000574755 CEP41Q9BYV8 373 aa14.49□□□□□ -0.09
VPS33B-208ENST00000574755 PRDM12Q9H4Q4 367 aa14.49□□□□□ -0.09
VPS33B-208ENST00000574755 WDCPQ9H6R7 721 aa14.49□□□□□ -0.09
VPS33B-208ENST00000574755 GPBP1L1Q9HC44 474 aaPredicted RBP14.49□□□□□ -0.09
VPS33B-208ENST00000574755 XAB2Q9HCS7 855 aaKnown RBP14.49□□□□□ -0.09
VPS33B-208ENST00000574755 PNPLA8Q9NP80 782 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms