RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 PEAR1Q5VY43 1037 aaPredicted RBP22.06■■□□□ 1.12
CHRNB1-206ENST00000574054 PMF1Q6P1K2 205 aa22.06■■□□□ 1.12
CHRNB1-206ENST00000574054 RRAGAQ7L523 313 aa22.06■■□□□ 1.12
CHRNB1-206ENST00000574054 SLC41A1Q8IVJ1 513 aa22.06■■□□□ 1.12
CHRNB1-206ENST00000574054 FAM217AQ8IXS0 508 aa22.06■■□□□ 1.12
CHRNB1-206ENST00000574054 RBBP8NLQ8NC74 664 aaPredicted RBP22.06■■□□□ 1.12
CHRNB1-206ENST00000574054 SLC2A11Q9BYW1 496 aa22.06■■□□□ 1.12
CHRNB1-206ENST00000574054 SLC6A14Q9UN76 642 aa22.06■■□□□ 1.12
CHRNB1-206ENST00000574054 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.06■■□□□ 1.12
CHRNB1-206ENST00000574054 ASCC3Q8N3C0 2202 aaKnown RBP22.06■■□□□ 1.12
CHRNB1-206ENST00000574054 USP24Q9UPU5 2620 aa22.05■■□□□ 1.12
CHRNB1-206ENST00000574054 RNF225M0QZC1 329 aaPredicted RBP22.05■■□□□ 1.12
CHRNB1-206ENST00000574054 STX17P56962 302 aa22.05■■□□□ 1.12
CHRNB1-206ENST00000574054 MORC3Q14149 939 aa22.05■■□□□ 1.12
CHRNB1-206ENST00000574054 ZNF234Q14588 700 aa22.05■■□□□ 1.12
CHRNB1-206ENST00000574054 EIF4HQ15056 248 aaKnown RBP22.05■■□□□ 1.12
CHRNB1-206ENST00000574054 E2F5Q15329 346 aa22.05■■□□□ 1.12
CHRNB1-206ENST00000574054 CNGA2Q16280 664 aa22.05■■□□□ 1.12
CHRNB1-206ENST00000574054 ST3GAL2Q16842 350 aa22.05■■□□□ 1.12
CHRNB1-206ENST00000574054 RABEPKQ7Z6M1 372 aa22.05■■□□□ 1.12
CHRNB1-206ENST00000574054 RGL4Q8IZJ4 473 aa22.05■■□□□ 1.12
CHRNB1-206ENST00000574054 DEFB124Q8NES8 71 aa22.05■■□□□ 1.12
CHRNB1-206ENST00000574054 ZSWIM1Q9BR11 485 aa22.05■■□□□ 1.12
CHRNB1-206ENST00000574054 P4HA2O15460 535 aa22.04■■□□□ 1.12
CHRNB1-206ENST00000574054 SERPINF2P08697 491 aa22.04■■□□□ 1.12
CHRNB1-206ENST00000574054 CSRP1P21291 193 aaKnown RBP22.04■■□□□ 1.12
CHRNB1-206ENST00000574054 PRKCHP24723 683 aa22.04■■□□□ 1.12
CHRNB1-206ENST00000574054 HOXD9P28356 352 aaPredicted RBP22.04■■□□□ 1.12
CHRNB1-206ENST00000574054 CD6P30203 668 aa22.04■■□□□ 1.12
CHRNB1-206ENST00000574054 SHC2P98077 582 aa22.04■■□□□ 1.12
CHRNB1-206ENST00000574054 STILQ15468 1287 aa22.04■■□□□ 1.12
CHRNB1-206ENST00000574054 ARHGEF19Q8IW93 802 aa22.04■■□□□ 1.12
CHRNB1-206ENST00000574054 SCML4Q8N228 414 aa22.04■■□□□ 1.12
CHRNB1-206ENST00000574054 LMO3Q8TAP4 145 aa22.04■■□□□ 1.12
CHRNB1-206ENST00000574054 SLC35F5Q8WV83 523 aa22.04■■□□□ 1.12
CHRNB1-206ENST00000574054 GOLGA1Q92805 767 aa22.04■■□□□ 1.12
CHRNB1-206ENST00000574054 MKRN2Q9H000 416 aaKnown RBP22.04■■□□□ 1.12
CHRNB1-206ENST00000574054 GADD45BO75293 160 aaPredicted RBP22.03■■□□□ 1.12
CHRNB1-206ENST00000574054 EPHX1P07099 455 aa22.03■■□□□ 1.12
CHRNB1-206ENST00000574054 CEACAM1P13688 526 aa22.03■■□□□ 1.12
CHRNB1-206ENST00000574054 ZNF132P52740 706 aa22.03■■□□□ 1.12
CHRNB1-206ENST00000574054 KCNH2Q12809 1159 aa22.03■■□□□ 1.12
CHRNB1-206ENST00000574054 PAK1Q13153 545 aa22.03■■□□□ 1.12
CHRNB1-206ENST00000574054 ENPP2Q13822 863 aa22.03■■□□□ 1.12
CHRNB1-206ENST00000574054 SYCP2LQ5T4T6 812 aa22.03■■□□□ 1.12
CHRNB1-206ENST00000574054 ADGRF1Q5T601 910 aa22.03■■□□□ 1.12
CHRNB1-206ENST00000574054 SERPINA13PQ6UXR4 307 aa22.03■■□□□ 1.12
CHRNB1-206ENST00000574054 CACUL1Q86Y37 369 aa22.03■■□□□ 1.12
CHRNB1-206ENST00000574054 CLEC4CQ8WTT0 213 aa22.03■■□□□ 1.12
CHRNB1-206ENST00000574054 IRGQQ8WZA9 623 aa22.03■■□□□ 1.12
CHRNB1-206ENST00000574054 FOXJ1Q92949 421 aa22.03■■□□□ 1.12
CHRNB1-206ENST00000574054 TMA16Q96EY4 203 aaKnown RBP22.03■■□□□ 1.12
CHRNB1-206ENST00000574054 CAPN10Q9HC96 672 aa22.03■■□□□ 1.12
CHRNB1-206ENST00000574054 CEP192Q8TEP8 1941 aa22.03■■□□□ 1.12
CHRNB1-206ENST00000574054 CACNA1EQ15878 2313 aa22.02■■□□□ 1.12
CHRNB1-206ENST00000574054 MEI4A8MW99 385 aa22.02■■□□□ 1.12
CHRNB1-206ENST00000574054 TIMM44O43615 452 aa22.02■■□□□ 1.12
CHRNB1-206ENST00000574054 GABBR2O75899 941 aa22.02■■□□□ 1.12
CHRNB1-206ENST00000574054 LATS1O95835 1130 aa22.02■■□□□ 1.12
CHRNB1-206ENST00000574054 GNA14O95837 355 aa22.02■■□□□ 1.12
CHRNB1-206ENST00000574054 LTFP02788 710 aa22.02■■□□□ 1.12
CHRNB1-206ENST00000574054 NCAM1P13591 858 aa22.02■■□□□ 1.12
CHRNB1-206ENST00000574054 KRT5P13647 590 aa22.02■■□□□ 1.12
CHRNB1-206ENST00000574054 ZNF445P59923 1031 aa22.02■■□□□ 1.12
CHRNB1-206ENST00000574054 GCNT1Q02742 428 aa22.02■■□□□ 1.12
CHRNB1-206ENST00000574054 FOXC1Q12948 553 aa22.02■■□□□ 1.12
CHRNB1-206ENST00000574054 FNDC3BQ53EP0 1204 aaKnown RBP22.02■■□□□ 1.12
CHRNB1-206ENST00000574054 TMEM215Q68D42 235 aa22.02■■□□□ 1.12
CHRNB1-206ENST00000574054 MSANTD2Q6P1R3 559 aa22.02■■□□□ 1.12
CHRNB1-206ENST00000574054 TMPRSS6Q8IU80 811 aa22.02■■□□□ 1.12
CHRNB1-206ENST00000574054 TRIM59Q8IWR1 403 aa22.02■■□□□ 1.12
CHRNB1-206ENST00000574054 HDDC3Q8N4P3 179 aa22.02■■□□□ 1.12
CHRNB1-206ENST00000574054 EHBP1Q8NDI1 1231 aa22.02■■□□□ 1.12
CHRNB1-206ENST00000574054 PRCCQ92733 491 aaPredicted RBP22.02■■□□□ 1.12
CHRNB1-206ENST00000574054 SIPA1Q96FS4 1042 aa22.02■■□□□ 1.12
CHRNB1-206ENST00000574054 TOE1Q96GM8 510 aaKnown RBP22.02■■□□□ 1.12
CHRNB1-206ENST00000574054 ZNF419Q96HQ0 510 aaPredicted RBP22.02■■□□□ 1.12
CHRNB1-206ENST00000574054 MIS12Q9H081 205 aa22.02■■□□□ 1.12
CHRNB1-206ENST00000574054 INTS2Q9H0H0 1204 aaKnown RBP22.02■■□□□ 1.12
CHRNB1-206ENST00000574054 SLC32A1Q9H598 525 aa22.02■■□□□ 1.12
CHRNB1-206ENST00000574054 ABCB8Q9NUT2 735 aa22.02■■□□□ 1.12
CHRNB1-206ENST00000574054 USP36Q9P275 1121 aaKnown RBP22.02■■□□□ 1.12
CHRNB1-206ENST00000574054 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.02■■□□□ 1.12
CHRNB1-206ENST00000574054 KRT37O76014 449 aa22.01■■□□□ 1.11
CHRNB1-206ENST00000574054 FBXO21O94952 628 aa22.01■■□□□ 1.11
CHRNB1-206ENST00000574054 AFPP02771 609 aaKnown RBP22.01■■□□□ 1.11
CHRNB1-206ENST00000574054 ACADMP11310 421 aa22.01■■□□□ 1.11
CHRNB1-206ENST00000574054 SGSHP51688 502 aa22.01■■□□□ 1.11
CHRNB1-206ENST00000574054 PLEKHG6Q3KR16 790 aa22.01■■□□□ 1.11
CHRNB1-206ENST00000574054 WDR45BQ5MNZ6 344 aa22.01■■□□□ 1.11
CHRNB1-206ENST00000574054 RFWD3Q6PCD5 774 aa22.01■■□□□ 1.11
CHRNB1-206ENST00000574054 FOXR2Q6PJQ5 311 aa22.01■■□□□ 1.11
CHRNB1-206ENST00000574054 OR2I1PQ8NGU4 316 aa22.01■■□□□ 1.11
CHRNB1-206ENST00000574054 WFIKKN2Q8TEU8 576 aa22.01■■□□□ 1.11
CHRNB1-206ENST00000574054 CYB5D2Q8WUJ1 264 aa22.01■■□□□ 1.11
CHRNB1-206ENST00000574054 HSFY1Q96LI6 401 aa22.01■■□□□ 1.11
CHRNB1-206ENST00000574054 GPR174Q9BXC1 333 aa22.01■■□□□ 1.11
CHRNB1-206ENST00000574054 SRRTQ9BXP5 876 aaKnown RBP22.01■■□□□ 1.11
CHRNB1-206ENST00000574054 STOML2Q9UJZ1 356 aa22.01■■□□□ 1.11
CHRNB1-206ENST00000574054 ARHGAP33O14559 1287 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms