RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 DESP17661 470 aa11.47□□□□□ -0.57
CHD3-216ENST00000573936 SDHBP21912 280 aa11.47□□□□□ -0.57
CHD3-216ENST00000573936 EIF2DP41214 584 aaKnown RBP11.47□□□□□ -0.57
CHD3-216ENST00000573936 ZNF75DP51815 510 aa11.47□□□□□ -0.57
CHD3-216ENST00000573936 GRSF1Q12849 480 aaKnown RBP eCLIP11.47□□□□□ -0.57
CHD3-216ENST00000573936 PTP4A2Q12974 167 aa11.47□□□□□ -0.57
CHD3-216ENST00000573936 LRRC32Q14392 662 aa11.47□□□□□ -0.57
CHD3-216ENST00000573936 SLC25A52Q3SY17 297 aa11.47□□□□□ -0.57
CHD3-216ENST00000573936 C2CD6Q53TS8 623 aa11.47□□□□□ -0.57
CHD3-216ENST00000573936 LY6G5CQ5SRR4 150 aa11.47□□□□□ -0.57
CHD3-216ENST00000573936 E4F1Q66K89 784 aaPredicted RBP11.47□□□□□ -0.57
CHD3-216ENST00000573936 HGSNATQ68CP4 663 aa11.47□□□□□ -0.57
CHD3-216ENST00000573936 RHBDF2Q6PJF5 856 aa11.47□□□□□ -0.57
CHD3-216ENST00000573936 SND1Q7KZF4 910 aaKnown RBP eCLIP11.47□□□□□ -0.57
CHD3-216ENST00000573936 MON1BQ7L1V2 547 aa11.47□□□□□ -0.57
CHD3-216ENST00000573936 DENND1CQ8IV53 801 aa11.47□□□□□ -0.57
CHD3-216ENST00000573936 MCOLN2Q8IZK6 566 aa11.47□□□□□ -0.57
CHD3-216ENST00000573936 CPXM2Q8N436 756 aa11.47□□□□□ -0.57
CHD3-216ENST00000573936 ATP6V0D2Q8N8Y2 350 aa11.47□□□□□ -0.57
CHD3-216ENST00000573936 C3orf20Q8ND61 904 aa11.47□□□□□ -0.57
CHD3-216ENST00000573936 PJA1Q8NG27 643 aa11.47□□□□□ -0.57
CHD3-216ENST00000573936 CCDC26Q8TAB7 109 aa11.47□□□□□ -0.57
CHD3-216ENST00000573936 CD101Q93033 1021 aa11.47□□□□□ -0.57
CHD3-216ENST00000573936 RNF34Q969K3 372 aa11.47□□□□□ -0.57
CHD3-216ENST00000573936 PGAP3Q96FM1 320 aaPredicted RBP11.47□□□□□ -0.57
CHD3-216ENST00000573936 SLC39A13Q96H72 371 aa11.47□□□□□ -0.57
CHD3-216ENST00000573936 PIWIL1Q96J94 861 aaKnown RBP11.47□□□□□ -0.57
CHD3-216ENST00000573936 XPO6Q96QU8 1125 aaKnown RBP11.47□□□□□ -0.57
CHD3-216ENST00000573936 DNAJC7Q99615 494 aa11.47□□□□□ -0.57
CHD3-216ENST00000573936 FAM204AQ9H8W3 233 aa11.47□□□□□ -0.57
CHD3-216ENST00000573936 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.47□□□□□ -0.57
CHD3-216ENST00000573936 STOML2Q9UJZ1 356 aa11.47□□□□□ -0.57
CHD3-216ENST00000573936 TMEM59LQ9UK28 342 aa11.47□□□□□ -0.57
CHD3-216ENST00000573936 PAXBP1Q9Y5B6 917 aa11.47□□□□□ -0.57
CHD3-216ENST00000573936 NCOR2Q9Y618 2525 aa11.46□□□□□ -0.57
CHD3-216ENST00000573936 SSU72P8A0A1W2PR75 194 aa11.46□□□□□ -0.57
CHD3-216ENST00000573936 ANKRD62A6NC57 917 aa11.46□□□□□ -0.57
CHD3-216ENST00000573936 OTOL1A6NHN0 477 aaPredicted RBP11.46□□□□□ -0.57
CHD3-216ENST00000573936 SIGLEC16A6NMB1 481 aa11.46□□□□□ -0.57
CHD3-216ENST00000573936 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.46□□□□□ -0.57
CHD3-216ENST00000573936 M0QYT0 321 aa11.46□□□□□ -0.57
CHD3-216ENST00000573936 SCAMP3O14828 347 aaKnown RBP11.46□□□□□ -0.57
CHD3-216ENST00000573936 HOXC11O43248 304 aaPredicted RBP11.46□□□□□ -0.57
CHD3-216ENST00000573936 ACSL4O60488 711 aa11.46□□□□□ -0.57
CHD3-216ENST00000573936 FTLP02792 175 aaPredicted RBP11.46□□□□□ -0.57
CHD3-216ENST00000573936 SP9P0CG40 484 aa11.46□□□□□ -0.57
CHD3-216ENST00000573936 MYBL1P10243 752 aa11.46□□□□□ -0.57
CHD3-216ENST00000573936 ABCB4P21439 1286 aa11.46□□□□□ -0.57
CHD3-216ENST00000573936 DRD1P21728 446 aa11.46□□□□□ -0.57
CHD3-216ENST00000573936 CD72P21854 359 aa11.46□□□□□ -0.57
CHD3-216ENST00000573936 CCR1P32246 355 aa11.46□□□□□ -0.57
CHD3-216ENST00000573936 SOX9P48436 509 aa11.46□□□□□ -0.57
CHD3-216ENST00000573936 SULT1E1P49888 294 aa11.46□□□□□ -0.57
CHD3-216ENST00000573936 DEUP1Q05D60 604 aa11.46□□□□□ -0.57
CHD3-216ENST00000573936 TBX2Q13207 712 aaPredicted RBP11.46□□□□□ -0.57
CHD3-216ENST00000573936 EIF4EBP2Q13542 120 aaPredicted RBP11.46□□□□□ -0.57
CHD3-216ENST00000573936 ANO4Q32M45 955 aa11.46□□□□□ -0.57
CHD3-216ENST00000573936 DGKKQ5KSL6 1271 aa11.46□□□□□ -0.57
CHD3-216ENST00000573936 ADGRF1Q5T601 910 aa11.46□□□□□ -0.57
CHD3-216ENST00000573936 ACBD5Q5T8D3 534 aaPredicted RBP11.46□□□□□ -0.57
CHD3-216ENST00000573936 DNAJC24Q6P3W2 148 aa11.46□□□□□ -0.57
CHD3-216ENST00000573936 TPGS1Q6ZTW0 290 aa11.46□□□□□ -0.57
CHD3-216ENST00000573936 NUDT18Q6ZVK8 323 aa11.46□□□□□ -0.57
CHD3-216ENST00000573936 FAM217AQ8IXS0 508 aa11.46□□□□□ -0.57
CHD3-216ENST00000573936 ADAM32Q8TC27 787 aa11.46□□□□□ -0.57
CHD3-216ENST00000573936 NT5C3BQ969T7 300 aa11.46□□□□□ -0.57
CHD3-216ENST00000573936 BTN2A3PQ96KV6 586 aa11.46□□□□□ -0.57
CHD3-216ENST00000573936 FCRL2Q96LA5 508 aaPredicted RBP11.46□□□□□ -0.57
CHD3-216ENST00000573936 NPY6RQ99463 290 aa11.46□□□□□ -0.57
CHD3-216ENST00000573936 P2RY13Q9BPV8 354 aa11.46□□□□□ -0.57
CHD3-216ENST00000573936 ISCUQ9H1K1 167 aa11.46□□□□□ -0.57
CHD3-216ENST00000573936 DEF6Q9H4E7 631 aa11.46□□□□□ -0.57
CHD3-216ENST00000573936 METTL5Q9NRN9 209 aaKnown RBP11.46□□□□□ -0.57
CHD3-216ENST00000573936 ABHD10Q9NUJ1 306 aa11.46□□□□□ -0.57
CHD3-216ENST00000573936 PARVAQ9NVD7 372 aa11.46□□□□□ -0.57
CHD3-216ENST00000573936 DDIT4Q9NX09 232 aa11.46□□□□□ -0.57
CHD3-216ENST00000573936 MARK1Q9P0L2 795 aa11.46□□□□□ -0.57
CHD3-216ENST00000573936 NCDNQ9UBB6 729 aa11.46□□□□□ -0.57
CHD3-216ENST00000573936 ADAMTS1Q9UHI8 967 aa11.46□□□□□ -0.57
CHD3-216ENST00000573936 NDRG2Q9UN36 371 aaKnown RBP11.46□□□□□ -0.57
CHD3-216ENST00000573936 KIF26AQ9ULI4 1882 aaPredicted RBP11.46□□□□□ -0.58
CHD3-216ENST00000573936 FAM170AA1A519 330 aa11.45□□□□□ -0.58
CHD3-216ENST00000573936 SHISA7A6NL88 538 aa11.45□□□□□ -0.58
CHD3-216ENST00000573936 TMCO5BA8MYB1 307 aa11.45□□□□□ -0.58
CHD3-216ENST00000573936 MFAP3LO75121 409 aa11.45□□□□□ -0.58
CHD3-216ENST00000573936 PDGFRAP16234 1089 aa11.45□□□□□ -0.58
CHD3-216ENST00000573936 TARSP26639 723 aaKnown RBP11.45□□□□□ -0.58
CHD3-216ENST00000573936 SDC4P31431 198 aa11.45□□□□□ -0.58
CHD3-216ENST00000573936 RPS9P46781 194 aaKnown RBP11.45□□□□□ -0.58
CHD3-216ENST00000573936 GALK1P51570 392 aa11.45□□□□□ -0.58
CHD3-216ENST00000573936 ADKP55263 362 aaKnown RBP11.45□□□□□ -0.58
CHD3-216ENST00000573936 NME3Q13232 169 aa11.45□□□□□ -0.58
CHD3-216ENST00000573936 MAPK8IP2Q13387 824 aaPredicted RBP11.45□□□□□ -0.58
CHD3-216ENST00000573936 PPP2R5DQ14738 602 aa11.45□□□□□ -0.58
CHD3-216ENST00000573936 PON2Q15165 354 aa11.45□□□□□ -0.58
CHD3-216ENST00000573936 FBXO43Q4G163 708 aa11.45□□□□□ -0.58
CHD3-216ENST00000573936 MPPE1Q53F39 396 aa11.45□□□□□ -0.58
CHD3-216ENST00000573936 TMEM196Q5HYL7 178 aa11.45□□□□□ -0.58
CHD3-216ENST00000573936 BRMS1LQ5PSV4 323 aa11.45□□□□□ -0.58
CHD3-216ENST00000573936 TXNDC11Q6PKC3 985 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms