RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 NAALADL1Q9UQQ1 740 aa13.23□□□□□ -0.29
NPLOC4-213ENST00000573519 STON1Q9Y6Q2 735 aa13.23□□□□□ -0.29
NPLOC4-213ENST00000573519 DNAH14Q0VDD8 3507 aa13.22□□□□□ -0.29
NPLOC4-213ENST00000573519 GOLGA6L7A0A1B0GV03 622 aa13.22□□□□□ -0.29
NPLOC4-213ENST00000573519 GTPBP10A4D1E9 387 aaKnown RBP13.22□□□□□ -0.29
NPLOC4-213ENST00000573519 BECN2A8MW95 431 aa13.22□□□□□ -0.29
NPLOC4-213ENST00000573519 KCNJ18B7U540 433 aa13.22□□□□□ -0.29
NPLOC4-213ENST00000573519 E5RJQ4 531 aa13.22□□□□□ -0.29
NPLOC4-213ENST00000573519 GFRA2O00451 464 aa13.22□□□□□ -0.29
NPLOC4-213ENST00000573519 LATS1O95835 1130 aa13.22□□□□□ -0.29
NPLOC4-213ENST00000573519 NDUFV2P19404 249 aa13.22□□□□□ -0.29
NPLOC4-213ENST00000573519 HOXD9P28356 352 aaPredicted RBP13.22□□□□□ -0.29
NPLOC4-213ENST00000573519 ZNF445P59923 1031 aa13.22□□□□□ -0.29
NPLOC4-213ENST00000573519 RPL6Q02878 288 aaKnown RBP13.22□□□□□ -0.29
NPLOC4-213ENST00000573519 KCNJ12Q14500 433 aa13.22□□□□□ -0.29
NPLOC4-213ENST00000573519 MAP7D1Q3KQU3 841 aa13.22□□□□□ -0.29
NPLOC4-213ENST00000573519 VWA3BQ502W6 1294 aa13.22□□□□□ -0.29
NPLOC4-213ENST00000573519 RFWD3Q6PCD5 774 aa13.22□□□□□ -0.29
NPLOC4-213ENST00000573519 KIAA1324Q6UXG2 1013 aaKnown RBP13.22□□□□□ -0.29
NPLOC4-213ENST00000573519 RBM43Q6ZSC3 357 aaKnown RBP13.22□□□□□ -0.29
NPLOC4-213ENST00000573519 DEFB119Q8N690 84 aa13.22□□□□□ -0.29
NPLOC4-213ENST00000573519 DQX1Q8TE96 717 aaKnown RBP13.22□□□□□ -0.29
NPLOC4-213ENST00000573519 SORCS1Q8WY21 1168 aa13.22□□□□□ -0.29
NPLOC4-213ENST00000573519 PIWIL1Q96J94 861 aaKnown RBP13.22□□□□□ -0.29
NPLOC4-213ENST00000573519 SERPINB11Q96P15 392 aa13.22□□□□□ -0.29
NPLOC4-213ENST00000573519 TUBGCP2Q9BSJ2 902 aa13.22□□□□□ -0.29
NPLOC4-213ENST00000573519 SLC4A5Q9BY07 1137 aa13.22□□□□□ -0.29
NPLOC4-213ENST00000573519 SLC2A11Q9BYW1 496 aa13.22□□□□□ -0.29
NPLOC4-213ENST00000573519 NDST4Q9H3R1 872 aa13.22□□□□□ -0.29
NPLOC4-213ENST00000573519 ELOVL2Q9NXB9 296 aa13.22□□□□□ -0.29
NPLOC4-213ENST00000573519 THAP10Q9P2Z0 257 aaPredicted RBP13.22□□□□□ -0.29
NPLOC4-213ENST00000573519 CYTH4Q9UIA0 394 aa13.22□□□□□ -0.29
NPLOC4-213ENST00000573519 DNAJC12Q9UKB3 198 aa13.22□□□□□ -0.29
NPLOC4-213ENST00000573519 AJAP1Q9UKB5 411 aaPredicted RBP13.22□□□□□ -0.29
NPLOC4-213ENST00000573519 CYP8B1Q9UNU6 501 aa13.22□□□□□ -0.29
NPLOC4-213ENST00000573519 ATXN2Q99700 1313 aaKnown RBP13.21□□□□□ -0.29
NPLOC4-213ENST00000573519 KHNYNO15037 678 aaKnown RBP13.21□□□□□ -0.29
NPLOC4-213ENST00000573519 PAPSS1O43252 624 aaPredicted RBP13.21□□□□□ -0.29
NPLOC4-213ENST00000573519 AP5Z1O43299 807 aa13.21□□□□□ -0.29
NPLOC4-213ENST00000573519 ACSL4O60488 711 aa13.21□□□□□ -0.29
NPLOC4-213ENST00000573519 SYNCRIPO60506 623 aaKnown RBP13.21□□□□□ -0.29
NPLOC4-213ENST00000573519 TBL1XO60907 577 aa13.21□□□□□ -0.29
NPLOC4-213ENST00000573519 MBD3O95983 291 aa13.21□□□□□ -0.29
NPLOC4-213ENST00000573519 MOCS2O96007 188 aaPredicted RBP13.21□□□□□ -0.29
NPLOC4-213ENST00000573519 IGLV3-27P01718 113 aa13.21□□□□□ -0.29
NPLOC4-213ENST00000573519 FYNP06241 537 aa13.21□□□□□ -0.29
NPLOC4-213ENST00000573519 PNMA6AP0CW24 399 aaPredicted RBP13.21□□□□□ -0.29
NPLOC4-213ENST00000573519 IL12RB1P42701 662 aa13.21□□□□□ -0.29
NPLOC4-213ENST00000573519 PTGER3P43115 390 aa13.21□□□□□ -0.29
NPLOC4-213ENST00000573519 SGSHP51688 502 aa13.21□□□□□ -0.29
NPLOC4-213ENST00000573519 PTK2Q05397 1052 aa13.21□□□□□ -0.29
NPLOC4-213ENST00000573519 PDCLQ13371 301 aa13.21□□□□□ -0.29
NPLOC4-213ENST00000573519 RAPGEF1Q13905 1077 aa13.21□□□□□ -0.29
NPLOC4-213ENST00000573519 ZNF234Q14588 700 aa13.21□□□□□ -0.29
NPLOC4-213ENST00000573519 EIF4HQ15056 248 aaKnown RBP13.21□□□□□ -0.29
NPLOC4-213ENST00000573519 MEA1Q16626 185 aa13.21□□□□□ -0.29
NPLOC4-213ENST00000573519 CCDC183Q5T5S1 534 aa13.21□□□□□ -0.29
NPLOC4-213ENST00000573519 RNF43Q68DV7 783 aa13.21□□□□□ -0.29
NPLOC4-213ENST00000573519 C11orf57Q6ZUT1 292 aaPredicted RBP13.21□□□□□ -0.29
NPLOC4-213ENST00000573519 TAC4Q86UU9 113 aa13.21□□□□□ -0.29
NPLOC4-213ENST00000573519 STK32AQ8WU08 396 aa13.21□□□□□ -0.29
NPLOC4-213ENST00000573519 SHC3Q92529 594 aa13.21□□□□□ -0.29
NPLOC4-213ENST00000573519 EDEM2Q9BV94 578 aa13.21□□□□□ -0.29
NPLOC4-213ENST00000573519 TRIM62Q9BVG3 475 aa13.21□□□□□ -0.29
NPLOC4-213ENST00000573519 POPDC2Q9HBU9 364 aa13.21□□□□□ -0.29
NPLOC4-213ENST00000573519 SIX2Q9NPC8 291 aa13.21□□□□□ -0.29
NPLOC4-213ENST00000573519 ABCB8Q9NUT2 735 aa13.21□□□□□ -0.29
NPLOC4-213ENST00000573519 STIM2Q9P246 746 aa13.21□□□□□ -0.29
NPLOC4-213ENST00000573519 STOML2Q9UJZ1 356 aa13.21□□□□□ -0.29
NPLOC4-213ENST00000573519 NFE2L3Q9Y4A8 694 aa13.21□□□□□ -0.29
NPLOC4-213ENST00000573519 SPTBN4Q9H254 2564 aa13.21□□□□□ -0.3
NPLOC4-213ENST00000573519 DCHS1Q96JQ0 3298 aa13.21□□□□□ -0.3
NPLOC4-213ENST00000573519 TYW5A2RUC4 315 aaKnown RBP13.2□□□□□ -0.3
NPLOC4-213ENST00000573519 PATE3B3GLJ2 98 aa13.2□□□□□ -0.3
NPLOC4-213ENST00000573519 NPC1O15118 1278 aa13.2□□□□□ -0.3
NPLOC4-213ENST00000573519 ZNF217O75362 1048 aa13.2□□□□□ -0.3
NPLOC4-213ENST00000573519 EPHX1P07099 455 aa13.2□□□□□ -0.3
NPLOC4-213ENST00000573519 HLA-FP30511 346 aa13.2□□□□□ -0.3
NPLOC4-213ENST00000573519 SLC6A4P31645 630 aa13.2□□□□□ -0.3
NPLOC4-213ENST00000573519 KRT9P35527 623 aa13.2□□□□□ -0.3
NPLOC4-213ENST00000573519 RPL34P49207 117 aaKnown RBP13.2□□□□□ -0.3
NPLOC4-213ENST00000573519 YWHAZP63104 245 aaKnown RBP13.2□□□□□ -0.3
NPLOC4-213ENST00000573519 RING1Q06587 406 aa13.2□□□□□ -0.3
NPLOC4-213ENST00000573519 E2F5Q15329 346 aa13.2□□□□□ -0.3
NPLOC4-213ENST00000573519 FUT11Q495W5 492 aa13.2□□□□□ -0.3
NPLOC4-213ENST00000573519 FNDC3BQ53EP0 1204 aaKnown RBP13.2□□□□□ -0.3
NPLOC4-213ENST00000573519 FAM133BQ5BKY9 247 aaKnown RBP13.2□□□□□ -0.3
NPLOC4-213ENST00000573519 MIIPQ5JXC2 388 aa13.2□□□□□ -0.3
NPLOC4-213ENST00000573519 STPG1Q5TH74 334 aa13.2□□□□□ -0.3
NPLOC4-213ENST00000573519 SYPL2Q5VXT5 272 aa13.2□□□□□ -0.3
NPLOC4-213ENST00000573519 LYSMD4Q5XG99 296 aa13.2□□□□□ -0.3
NPLOC4-213ENST00000573519 TMEM215Q68D42 235 aa13.2□□□□□ -0.3
NPLOC4-213ENST00000573519 SASS6Q6UVJ0 657 aa13.2□□□□□ -0.3
NPLOC4-213ENST00000573519 SERPINA13PQ6UXR4 307 aa13.2□□□□□ -0.3
NPLOC4-213ENST00000573519 SLC36A4Q6YBV0 504 aa13.2□□□□□ -0.3
NPLOC4-213ENST00000573519 CHST9Q7L1S5 443 aa13.2□□□□□ -0.3
NPLOC4-213ENST00000573519 TMEM110Q86TL2 294 aa13.2□□□□□ -0.3
NPLOC4-213ENST00000573519 CACUL1Q86Y37 369 aa13.2□□□□□ -0.3
NPLOC4-213ENST00000573519 PPP1R13BQ96KQ4 1090 aa13.2□□□□□ -0.3
NPLOC4-213ENST00000573519 FCRL2Q96LA5 508 aaPredicted RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms