RNA–Protein interactions for RNA: ENST00000573212.5

NPLOC4-211, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-211ENST00000573212 CILPO75339 1184 aa8.54□□□□□ -1.04
NPLOC4-211ENST00000573212 IGLV3-19P01714 112 aa8.54□□□□□ -1.04
NPLOC4-211ENST00000573212 C4BPAP04003 597 aaKnown RBP8.54□□□□□ -1.04
NPLOC4-211ENST00000573212 ATXN1LP0C7T5 689 aaKnown RBP8.54□□□□□ -1.04
NPLOC4-211ENST00000573212 DLATP10515 647 aaKnown RBP8.54□□□□□ -1.04
NPLOC4-211ENST00000573212 IRF1P10914 325 aa8.54□□□□□ -1.04
NPLOC4-211ENST00000573212 NCAM1P13591 858 aa8.54□□□□□ -1.04
NPLOC4-211ENST00000573212 OXTRP30559 389 aa8.54□□□□□ -1.04
NPLOC4-211ENST00000573212 ATP5C1P36542 298 aaKnown RBP8.54□□□□□ -1.04
NPLOC4-211ENST00000573212 PLA2G4AP47712 749 aa8.54□□□□□ -1.04
NPLOC4-211ENST00000573212 RPIAP49247 311 aa8.54□□□□□ -1.04
NPLOC4-211ENST00000573212 DGKGP49619 791 aa8.54□□□□□ -1.04
NPLOC4-211ENST00000573212 COPAP53621 1224 aa8.54□□□□□ -1.04
NPLOC4-211ENST00000573212 TNNC1P63316 161 aa8.54□□□□□ -1.04
NPLOC4-211ENST00000573212 SLC39A14Q15043 492 aa8.54□□□□□ -1.04
NPLOC4-211ENST00000573212 BMT2Q1RMZ1 405 aa8.54□□□□□ -1.04
NPLOC4-211ENST00000573212 HLA-BQ31612 363 aa8.54□□□□□ -1.04
NPLOC4-211ENST00000573212 FUT11Q495W5 492 aa8.54□□□□□ -1.04
NPLOC4-211ENST00000573212 PPP1R26Q5T8A7 1209 aaPredicted RBP8.54□□□□□ -1.04
NPLOC4-211ENST00000573212 CNNM4Q6P4Q7 775 aa8.54□□□□□ -1.04
NPLOC4-211ENST00000573212 KLHDC10Q6PID8 442 aa8.54□□□□□ -1.04
NPLOC4-211ENST00000573212 CCDC116Q8IYX3 515 aa8.54□□□□□ -1.04
NPLOC4-211ENST00000573212 XXYLT1Q8NBI6 393 aa8.54□□□□□ -1.04
NPLOC4-211ENST00000573212 RBBP8NLQ8NC74 664 aaPredicted RBP8.54□□□□□ -1.04
NPLOC4-211ENST00000573212 RHBDD1Q8TEB9 315 aa8.54□□□□□ -1.04
NPLOC4-211ENST00000573212 ERLEC1Q96DZ1 483 aa8.54□□□□□ -1.04
NPLOC4-211ENST00000573212 SMARCD1Q96GM5 515 aa8.54□□□□□ -1.04
NPLOC4-211ENST00000573212 GPR174Q9BXC1 333 aa8.54□□□□□ -1.04
NPLOC4-211ENST00000573212 BBS2Q9BXC9 721 aa8.54□□□□□ -1.04
NPLOC4-211ENST00000573212 GAREM1Q9H706 876 aa8.54□□□□□ -1.04
NPLOC4-211ENST00000573212 PRDM16Q9HAZ2 1276 aa8.54□□□□□ -1.04
NPLOC4-211ENST00000573212 NMUR1Q9HB89 426 aa8.54□□□□□ -1.04
NPLOC4-211ENST00000573212 METTL5Q9NRN9 209 aaKnown RBP8.54□□□□□ -1.04
NPLOC4-211ENST00000573212 AGPAT3Q9NRZ7 376 aa8.54□□□□□ -1.04
NPLOC4-211ENST00000573212 TM7SF3Q9NS93 570 aa8.54□□□□□ -1.04
NPLOC4-211ENST00000573212 KBTBD4Q9NVX7 518 aa8.54□□□□□ -1.04
NPLOC4-211ENST00000573212 NXF1Q9UBU9 619 aaKnown RBP8.54□□□□□ -1.04
NPLOC4-211ENST00000573212 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.54□□□□□ -1.04
NPLOC4-211ENST00000573212 HRH3Q9Y5N1 445 aa8.54□□□□□ -1.04
NPLOC4-211ENST00000573212 USP3Q9Y6I4 520 aa8.54□□□□□ -1.04
NPLOC4-211ENST00000573212 PI4KAP42356 2102 aa8.54□□□□□ -1.04
NPLOC4-211ENST00000573212 IGSF10Q6WRI0 2623 aa8.53□□□□□ -1.04
NPLOC4-211ENST00000573212 CELSR3Q9NYQ7 3312 aa8.53□□□□□ -1.04
NPLOC4-211ENST00000573212 PLXNB3Q9ULL4 1909 aa8.53□□□□□ -1.04
NPLOC4-211ENST00000573212 BCAT2O15382 392 aaPredicted RBP8.53□□□□□ -1.04
NPLOC4-211ENST00000573212 VNN1O95497 513 aa8.53□□□□□ -1.04
NPLOC4-211ENST00000573212 PENKP01210 267 aaPredicted RBP8.53□□□□□ -1.04
NPLOC4-211ENST00000573212 IL2RAP01589 272 aa8.53□□□□□ -1.04
NPLOC4-211ENST00000573212 KLKB1P03952 638 aa8.53□□□□□ -1.04
NPLOC4-211ENST00000573212 BRD2P25440 801 aaKnown RBP8.53□□□□□ -1.04
NPLOC4-211ENST00000573212 TXLNAP40222 546 aa8.53□□□□□ -1.04
NPLOC4-211ENST00000573212 STAT6P42226 847 aa8.53□□□□□ -1.04
NPLOC4-211ENST00000573212 MATKP42679 507 aa8.53□□□□□ -1.04
NPLOC4-211ENST00000573212 IL12RB1P42701 662 aa8.53□□□□□ -1.04
NPLOC4-211ENST00000573212 TPMTP51580 245 aa8.53□□□□□ -1.04
NPLOC4-211ENST00000573212 CYP4F3Q08477 520 aa8.53□□□□□ -1.04
NPLOC4-211ENST00000573212 TRPC3Q13507 836 aa8.53□□□□□ -1.04
NPLOC4-211ENST00000573212 CUL4AQ13619 759 aa8.53□□□□□ -1.04
NPLOC4-211ENST00000573212 SMAD1Q15797 465 aaKnown RBP8.53□□□□□ -1.04
NPLOC4-211ENST00000573212 DCAF12L1Q5VU92 463 aa8.53□□□□□ -1.04
NPLOC4-211ENST00000573212 FYB2Q5VWT5 728 aa8.53□□□□□ -1.04
NPLOC4-211ENST00000573212 ERICH6BQ5W0A0 696 aa8.53□□□□□ -1.04
NPLOC4-211ENST00000573212 FAM173BQ6P4H8 233 aa8.53□□□□□ -1.04
NPLOC4-211ENST00000573212 IL27RAQ6UWB1 636 aa8.53□□□□□ -1.04
NPLOC4-211ENST00000573212 KIAA1324Q6UXG2 1013 aaKnown RBP8.53□□□□□ -1.04
NPLOC4-211ENST00000573212 STXBP4Q6ZWJ1 553 aa8.53□□□□□ -1.04
NPLOC4-211ENST00000573212 MARCH9Q86YJ5 346 aa8.53□□□□□ -1.04
NPLOC4-211ENST00000573212 TMPRSS6Q8IU80 811 aa8.53□□□□□ -1.04
NPLOC4-211ENST00000573212 C12orf56Q8IXR9 622 aa8.53□□□□□ -1.04
NPLOC4-211ENST00000573212 ZCCHC9Q8N567 271 aaKnown RBP8.53□□□□□ -1.04
NPLOC4-211ENST00000573212 PARD3BQ8TEW8 1205 aa8.53□□□□□ -1.04
NPLOC4-211ENST00000573212 SETD7Q8WTS6 366 aaKnown RBP8.53□□□□□ -1.04
NPLOC4-211ENST00000573212 SYAP1Q96A49 352 aaPredicted RBP8.53□□□□□ -1.04
NPLOC4-211ENST00000573212 CCDC127Q96BQ5 260 aa8.53□□□□□ -1.04
NPLOC4-211ENST00000573212 PIWIL1Q96J94 861 aaKnown RBP8.53□□□□□ -1.04
NPLOC4-211ENST00000573212 LRIG1Q96JA1 1093 aa8.53□□□□□ -1.04
NPLOC4-211ENST00000573212 TNIP3Q96KP6 325 aa8.53□□□□□ -1.04
NPLOC4-211ENST00000573212 CDC6Q99741 560 aa8.53□□□□□ -1.04
NPLOC4-211ENST00000573212 NUP58Q9BVL2 599 aa8.53□□□□□ -1.04
NPLOC4-211ENST00000573212 TNMDQ9H2S6 317 aa8.53□□□□□ -1.04
NPLOC4-211ENST00000573212 FBXO44Q9H4M3 255 aa8.53□□□□□ -1.04
NPLOC4-211ENST00000573212 SMYD3Q9H7B4 428 aa8.53□□□□□ -1.04
NPLOC4-211ENST00000573212 OSGEPQ9NPF4 335 aa8.53□□□□□ -1.04
NPLOC4-211ENST00000573212 TLR8Q9NR97 1041 aaKnown RBP8.53□□□□□ -1.04
NPLOC4-211ENST00000573212 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.53□□□□□ -1.04
NPLOC4-211ENST00000573212 LSM7Q9UK45 103 aaKnown RBP8.53□□□□□ -1.04
NPLOC4-211ENST00000573212 SCML2Q9UQR0 700 aa8.53□□□□□ -1.04
NPLOC4-211ENST00000573212 ATP8B3O60423 1300 aa8.53□□□□□ -1.04
NPLOC4-211ENST00000573212 HELZP42694 1942 aaKnown RBP8.52□□□□□ -1.04
NPLOC4-211ENST00000573212 MYOFQ9NZM1 2061 aa8.52□□□□□ -1.05
NPLOC4-211ENST00000573212 E9PAM4 449 aa8.52□□□□□ -1.05
NPLOC4-211ENST00000573212 FLRT2O43155 660 aa8.52□□□□□ -1.05
NPLOC4-211ENST00000573212 SIAH2O43255 324 aa8.52□□□□□ -1.05
NPLOC4-211ENST00000573212 CER1O95813 267 aa8.52□□□□□ -1.05
NPLOC4-211ENST00000573212 RARGP13631 454 aa8.52□□□□□ -1.05
NPLOC4-211ENST00000573212 CCDC130P13994 396 aa8.52□□□□□ -1.05
NPLOC4-211ENST00000573212 CASP4P49662 377 aa8.52□□□□□ -1.05
NPLOC4-211ENST00000573212 AP3M2P53677 418 aa8.52□□□□□ -1.05
NPLOC4-211ENST00000573212 MFAP3P55082 362 aa8.52□□□□□ -1.05
NPLOC4-211ENST00000573212 MAP3K7CLP57077 242 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 136.9 ms