RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 SLC6A3Q01959 620 aa10.65□□□□□ -0.7
GTF3C1-213ENST00000571886 RING1Q06587 406 aa10.65□□□□□ -0.7
GTF3C1-213ENST00000571886 PPP2R5DQ14738 602 aa10.65□□□□□ -0.7
GTF3C1-213ENST00000571886 CRY1Q16526 586 aa10.65□□□□□ -0.7
GTF3C1-213ENST00000571886 DCAF6Q58WW2 860 aa10.65□□□□□ -0.7
GTF3C1-213ENST00000571886 ZC3H12AQ5D1E8 599 aaKnown RBP10.65□□□□□ -0.7
GTF3C1-213ENST00000571886 ADGRF1Q5T601 910 aa10.65□□□□□ -0.7
GTF3C1-213ENST00000571886 PIK3R6Q5UE93 754 aa10.65□□□□□ -0.7
GTF3C1-213ENST00000571886 NAA35Q5VZE5 725 aa10.65□□□□□ -0.7
GTF3C1-213ENST00000571886 TMEM215Q68D42 235 aa10.65□□□□□ -0.7
GTF3C1-213ENST00000571886 SMYD5Q6GMV2 418 aa10.65□□□□□ -0.7
GTF3C1-213ENST00000571886 TRNP1Q6NT89 227 aa10.65□□□□□ -0.7
GTF3C1-213ENST00000571886 BEND5Q7L4P6 421 aa10.65□□□□□ -0.7
GTF3C1-213ENST00000571886 PHLDB2Q86SQ0 1253 aa10.65□□□□□ -0.7
GTF3C1-213ENST00000571886 LUZP1Q86V48 1076 aa10.65□□□□□ -0.7
GTF3C1-213ENST00000571886 TMEM35BQ8NCS4 154 aa10.65□□□□□ -0.7
GTF3C1-213ENST00000571886 NEK11Q8NG66 645 aa10.65□□□□□ -0.7
GTF3C1-213ENST00000571886 DDI1Q8WTU0 396 aa10.65□□□□□ -0.7
GTF3C1-213ENST00000571886 GOLGA1Q92805 767 aa10.65□□□□□ -0.7
GTF3C1-213ENST00000571886 PRICKLE1Q96MT3 831 aaPredicted RBP10.65□□□□□ -0.7
GTF3C1-213ENST00000571886 NAT10Q9H0A0 1025 aaKnown RBP10.65□□□□□ -0.7
GTF3C1-213ENST00000571886 EPC1Q9H2F5 836 aa10.65□□□□□ -0.7
GTF3C1-213ENST00000571886 SEMA4AQ9H3S1 761 aa10.65□□□□□ -0.7
GTF3C1-213ENST00000571886 TLR6Q9Y2C9 796 aa10.65□□□□□ -0.7
GTF3C1-213ENST00000571886 STARD13Q9Y3M8 1113 aa10.65□□□□□ -0.7
GTF3C1-213ENST00000571886 RALGAPA1Q6GYQ0 2036 aa10.64□□□□□ -0.71
GTF3C1-213ENST00000571886 GPR179Q6PRD1 2367 aa10.64□□□□□ -0.71
GTF3C1-213ENST00000571886 SYNJ2BP-COX16A0A087WUM0 186 aa10.64□□□□□ -0.71
GTF3C1-213ENST00000571886 CAPN9O14815 690 aa10.64□□□□□ -0.71
GTF3C1-213ENST00000571886 DCLK1O15075 740 aa10.64□□□□□ -0.71
GTF3C1-213ENST00000571886 AXIN1O15169 862 aa10.64□□□□□ -0.71
GTF3C1-213ENST00000571886 IRAK2O43187 625 aa10.64□□□□□ -0.71
GTF3C1-213ENST00000571886 SART1O43290 800 aaKnown RBP10.64□□□□□ -0.71
GTF3C1-213ENST00000571886 MOCS2O96007 188 aaPredicted RBP10.64□□□□□ -0.71
GTF3C1-213ENST00000571886 CYP1A1P04798 512 aaPredicted RBP10.64□□□□□ -0.71
GTF3C1-213ENST00000571886 STAT1P42224 750 aa10.64□□□□□ -0.71
GTF3C1-213ENST00000571886 GABRB2P47870 512 aa10.64□□□□□ -0.71
GTF3C1-213ENST00000571886 RNASE9P60153 205 aaKnown RBP10.64□□□□□ -0.71
GTF3C1-213ENST00000571886 ARID5AQ03989 594 aa10.64□□□□□ -0.71
GTF3C1-213ENST00000571886 MPPE1Q53F39 396 aa10.64□□□□□ -0.71
GTF3C1-213ENST00000571886 EFHC1Q5JVL4 640 aa10.64□□□□□ -0.71
GTF3C1-213ENST00000571886 OTUD1Q5VV17 481 aaPredicted RBP10.64□□□□□ -0.71
GTF3C1-213ENST00000571886 KIAA1211LQ6NV74 962 aa10.64□□□□□ -0.71
GTF3C1-213ENST00000571886 PRR23BQ6ZRT6 265 aa10.64□□□□□ -0.71
GTF3C1-213ENST00000571886 XYLT1Q86Y38 959 aa10.64□□□□□ -0.71
GTF3C1-213ENST00000571886 CAMKK1Q8N5S9 505 aa10.64□□□□□ -0.71
GTF3C1-213ENST00000571886 FRMD1Q8N878 549 aa10.64□□□□□ -0.71
GTF3C1-213ENST00000571886 ZNF513Q8N8E2 541 aaPredicted RBP10.64□□□□□ -0.71
GTF3C1-213ENST00000571886 ANKRD20A12PQ8NF67 263 aa10.64□□□□□ -0.71
GTF3C1-213ENST00000571886 MDGA1Q8NFP4 955 aa10.64□□□□□ -0.71
GTF3C1-213ENST00000571886 SLC30A5Q8TAD4 765 aa10.64□□□□□ -0.71
GTF3C1-213ENST00000571886 SORCS1Q8WY21 1168 aa10.64□□□□□ -0.71
GTF3C1-213ENST00000571886 AZIN2Q96A70 460 aa10.64□□□□□ -0.71
GTF3C1-213ENST00000571886 ACDQ96AP0 544 aa10.64□□□□□ -0.71
GTF3C1-213ENST00000571886 C18orf8Q96DM3 657 aa10.64□□□□□ -0.71
GTF3C1-213ENST00000571886 TMA16Q96EY4 203 aaKnown RBP10.64□□□□□ -0.71
GTF3C1-213ENST00000571886 SERPINB11Q96P15 392 aa10.64□□□□□ -0.71
GTF3C1-213ENST00000571886 TPSD1Q9BZJ3 242 aa10.64□□□□□ -0.71
GTF3C1-213ENST00000571886 NUCKS1Q9H1E3 243 aaKnown RBP10.64□□□□□ -0.71
GTF3C1-213ENST00000571886 PDCL3Q9H2J4 239 aa10.64□□□□□ -0.71
GTF3C1-213ENST00000571886 CD248Q9HCU0 757 aa10.64□□□□□ -0.71
GTF3C1-213ENST00000571886 ANLNQ9NQW6 1124 aa10.64□□□□□ -0.71
GTF3C1-213ENST00000571886 COX16Q9P0S2 106 aa10.64□□□□□ -0.71
GTF3C1-213ENST00000571886 SMG5Q9UPR3 1016 aaKnown RBP10.64□□□□□ -0.71
GTF3C1-213ENST00000571886 SLC27A6Q9Y2P4 619 aa10.64□□□□□ -0.71
GTF3C1-213ENST00000571886 RAD54BQ9Y620 910 aa10.64□□□□□ -0.71
GTF3C1-213ENST00000571886 PTPRZ1P23471 2315 aaPredicted RBP10.64□□□□□ -0.71
GTF3C1-213ENST00000571886 SPAG17Q6Q759 2223 aa10.64□□□□□ -0.71
GTF3C1-213ENST00000571886 A0A1W2PQF6 199 aa10.63□□□□□ -0.71
GTF3C1-213ENST00000571886 KCNU1A8MYU2 1149 aa10.63□□□□□ -0.71
GTF3C1-213ENST00000571886 I6L893 689 aaPredicted RBP10.63□□□□□ -0.71
GTF3C1-213ENST00000571886 TBL1XO60907 577 aa10.63□□□□□ -0.71
GTF3C1-213ENST00000571886 HSF2BPO75031 334 aa10.63□□□□□ -0.71
GTF3C1-213ENST00000571886 GJB6O95452 261 aa10.63□□□□□ -0.71
GTF3C1-213ENST00000571886 APBB3O95704 486 aa10.63□□□□□ -0.71
GTF3C1-213ENST00000571886 LATS1O95835 1130 aa10.63□□□□□ -0.71
GTF3C1-213ENST00000571886 CYBBP04839 570 aa10.63□□□□□ -0.71
GTF3C1-213ENST00000571886 GLI1P08151 1106 aa10.63□□□□□ -0.71
GTF3C1-213ENST00000571886 HLA-FP30511 346 aa10.63□□□□□ -0.71
GTF3C1-213ENST00000571886 DGKEP52429 567 aa10.63□□□□□ -0.71
GTF3C1-213ENST00000571886 ATXN1P54253 815 aaKnown RBP10.63□□□□□ -0.71
GTF3C1-213ENST00000571886 RPS24P62847 133 aaKnown RBP10.63□□□□□ -0.71
GTF3C1-213ENST00000571886 CDR2Q01850 454 aa10.63□□□□□ -0.71
GTF3C1-213ENST00000571886 PTP4A2Q12974 167 aa10.63□□□□□ -0.71
GTF3C1-213ENST00000571886 NNTQ13423 1086 aa10.63□□□□□ -0.71
GTF3C1-213ENST00000571886 SIM2Q14190 667 aaPredicted RBP10.63□□□□□ -0.71
GTF3C1-213ENST00000571886 ZSCAN23Q3MJ62 389 aa10.63□□□□□ -0.71
GTF3C1-213ENST00000571886 RAB6CQ53S08 254 aa10.63□□□□□ -0.71
GTF3C1-213ENST00000571886 RAP1GAP2Q684P5 730 aa10.63□□□□□ -0.71
GTF3C1-213ENST00000571886 NUGGCQ68CJ6 796 aa10.63□□□□□ -0.71
GTF3C1-213ENST00000571886 ANO7Q6IWH7 933 aa10.63□□□□□ -0.71
GTF3C1-213ENST00000571886 SLC26A9Q7LBE3 791 aa10.63□□□□□ -0.71
GTF3C1-213ENST00000571886 KBTBD6Q86V97 674 aa10.63□□□□□ -0.71
GTF3C1-213ENST00000571886 RASSF3Q86WH2 238 aa10.63□□□□□ -0.71
GTF3C1-213ENST00000571886 ERICH1Q86X53 443 aa10.63□□□□□ -0.71
GTF3C1-213ENST00000571886 UNC45BQ8IWX7 931 aa10.63□□□□□ -0.71
GTF3C1-213ENST00000571886 CFAP52Q8N1V2 620 aa10.63□□□□□ -0.71
GTF3C1-213ENST00000571886 ZNF397Q8NF99 534 aaPredicted RBP10.63□□□□□ -0.71
GTF3C1-213ENST00000571886 TSTD1Q8NFU3 115 aa10.63□□□□□ -0.71
GTF3C1-213ENST00000571886 OLIG1Q8TAK6 271 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms