RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 HS6ST2Q96MM7 605 aa6.89□□□□□ -1.31
SMG1-217ENST00000569764 SFXN1Q9H9B4 322 aa6.89□□□□□ -1.31
SMG1-217ENST00000569764 CERS4Q9HA82 394 aa6.89□□□□□ -1.31
SMG1-217ENST00000569764 FARSBQ9NSD9 589 aaKnown RBP6.89□□□□□ -1.31
SMG1-217ENST00000569764 SETD4Q9NVD3 440 aa6.89□□□□□ -1.31
SMG1-217ENST00000569764 VPS28Q9UK41 221 aa6.89□□□□□ -1.31
SMG1-217ENST00000569764 SRPK3Q9UPE1 567 aa6.89□□□□□ -1.31
SMG1-217ENST00000569764 TIMM22Q9Y584 194 aa6.89□□□□□ -1.31
SMG1-217ENST00000569764 PCDHA2Q9Y5H9 948 aa6.89□□□□□ -1.31
SMG1-217ENST00000569764 VCANP13611 3396 aa6.88□□□□□ -1.31
SMG1-217ENST00000569764 PCP4L1A6NKN8 68 aa6.88□□□□□ -1.31
SMG1-217ENST00000569764 INSRRP14616 1297 aa6.88□□□□□ -1.31
SMG1-217ENST00000569764 HNMTP50135 292 aa6.88□□□□□ -1.31
SMG1-217ENST00000569764 ARHGDIBP52566 201 aa6.88□□□□□ -1.31
SMG1-217ENST00000569764 SLC26A5P58743 744 aa6.88□□□□□ -1.31
SMG1-217ENST00000569764 C19orf57Q0VDD7 668 aa6.88□□□□□ -1.31
SMG1-217ENST00000569764 MBTPS1Q14703 1052 aa6.88□□□□□ -1.31
SMG1-217ENST00000569764 C1orf185Q5T7R7 199 aa6.88□□□□□ -1.31
SMG1-217ENST00000569764 SMYD1Q8NB12 490 aa6.88□□□□□ -1.31
SMG1-217ENST00000569764 GOLM1Q8NBJ4 401 aa6.88□□□□□ -1.31
SMG1-217ENST00000569764 TSEN2Q8NCE0 465 aaKnown RBP6.88□□□□□ -1.31
SMG1-217ENST00000569764 NINJ1Q92982 152 aa6.88□□□□□ -1.31
SMG1-217ENST00000569764 PPP1R13BQ96KQ4 1090 aa6.88□□□□□ -1.31
SMG1-217ENST00000569764 ALS2CR12Q96Q35 445 aa6.88□□□□□ -1.31
SMG1-217ENST00000569764 TCF12Q99081 682 aa6.88□□□□□ -1.31
SMG1-217ENST00000569764 ACPTQ9BZG2 426 aa6.88□□□□□ -1.31
SMG1-217ENST00000569764 C8orf4Q9NR00 106 aa6.88□□□□□ -1.31
SMG1-217ENST00000569764 INTS13Q9NVM9 706 aa6.88□□□□□ -1.31
SMG1-217ENST00000569764 TTC7AQ9ULT0 858 aaPredicted RBP6.88□□□□□ -1.31
SMG1-217ENST00000569764 USP18Q9UMW8 372 aa6.88□□□□□ -1.31
SMG1-217ENST00000569764 A0A1W2PPL8 197 aa6.88□□□□□ -1.31
SMG1-217ENST00000569764 VWA3AA6NCI4 1184 aa6.88□□□□□ -1.31
SMG1-217ENST00000569764 EBAG9O00559 213 aa6.88□□□□□ -1.31
SMG1-217ENST00000569764 CUTAO60888 179 aa6.88□□□□□ -1.31
SMG1-217ENST00000569764 PSMA4P25789 261 aaKnown RBP6.88□□□□□ -1.31
SMG1-217ENST00000569764 PRKAR1BP31321 381 aa6.88□□□□□ -1.31
SMG1-217ENST00000569764 TXKP42681 527 aa6.88□□□□□ -1.31
SMG1-217ENST00000569764 DPYSQ14117 519 aa6.88□□□□□ -1.31
SMG1-217ENST00000569764 CCDC14Q49A88 953 aa6.88□□□□□ -1.31
SMG1-217ENST00000569764 SGO1Q5FBB7 561 aa6.88□□□□□ -1.31
SMG1-217ENST00000569764 THAP5Q7Z6K1 395 aa6.88□□□□□ -1.31
SMG1-217ENST00000569764 CCDC63Q8NA47 563 aa6.88□□□□□ -1.31
SMG1-217ENST00000569764 IQCDQ96DY2 449 aa6.88□□□□□ -1.31
SMG1-217ENST00000569764 ARL5BQ96KC2 179 aa6.88□□□□□ -1.31
SMG1-217ENST00000569764 TRIM56Q9BRZ2 755 aaKnown RBP6.88□□□□□ -1.31
SMG1-217ENST00000569764 SORBS1Q9BX66 1292 aaKnown RBP6.88□□□□□ -1.31
SMG1-217ENST00000569764 PARD6BQ9BYG5 372 aa6.88□□□□□ -1.31
SMG1-217ENST00000569764 MAGEF1Q9HAY2 307 aa6.88□□□□□ -1.31
SMG1-217ENST00000569764 PDE11AQ9HCR9 933 aa6.88□□□□□ -1.31
SMG1-217ENST00000569764 FETUBQ9UGM5 382 aa6.88□□□□□ -1.31
SMG1-217ENST00000569764 ZNF214Q9UL59 606 aaPredicted RBP6.88□□□□□ -1.31
SMG1-217ENST00000569764 MED16Q9Y2X0 877 aa6.88□□□□□ -1.31
SMG1-217ENST00000569764 GIT1Q9Y2X7 761 aa6.88□□□□□ -1.31
SMG1-217ENST00000569764 PCDHGB2Q9Y5G2 931 aa6.88□□□□□ -1.31
SMG1-217ENST00000569764 A0A1W2PRG0 241 aa6.88□□□□□ -1.31
SMG1-217ENST00000569764 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.88□□□□□ -1.31
SMG1-217ENST00000569764 MAGEC1O60732 1142 aa6.88□□□□□ -1.31
SMG1-217ENST00000569764 OR5F1O95221 314 aa6.88□□□□□ -1.31
SMG1-217ENST00000569764 SNHG28P0DPA3 235 aa6.88□□□□□ -1.31
SMG1-217ENST00000569764 WEE1P30291 646 aa6.88□□□□□ -1.31
SMG1-217ENST00000569764 ALDH3A1P30838 453 aa6.88□□□□□ -1.31
SMG1-217ENST00000569764 TECP42680 631 aa6.88□□□□□ -1.31
SMG1-217ENST00000569764 ST8SIA6P61647 398 aa6.88□□□□□ -1.31
SMG1-217ENST00000569764 GALNT1Q10472 559 aaPredicted RBP6.88□□□□□ -1.31
SMG1-217ENST00000569764 PTK2BQ14289 1009 aa6.88□□□□□ -1.31
SMG1-217ENST00000569764 DRICH1Q6PGQ1 229 aaPredicted RBP6.88□□□□□ -1.31
SMG1-217ENST00000569764 EFHBQ8N7U6 833 aa6.88□□□□□ -1.31
SMG1-217ENST00000569764 THAP3Q8WTV1 239 aaPredicted RBP6.88□□□□□ -1.31
SMG1-217ENST00000569764 SGK3Q96BR1 496 aa6.88□□□□□ -1.31
SMG1-217ENST00000569764 CDK5RAP1Q96SZ6 601 aaKnown RBP6.88□□□□□ -1.31
SMG1-217ENST00000569764 BCL7BQ9BQE9 202 aa6.88□□□□□ -1.31
SMG1-217ENST00000569764 MED10Q9BTT4 135 aa6.88□□□□□ -1.31
SMG1-217ENST00000569764 TUFT1Q9NNX1 390 aa6.88□□□□□ -1.31
SMG1-217ENST00000569764 BARHL2Q9NY43 387 aa6.88□□□□□ -1.31
SMG1-217ENST00000569764 KCND2Q9NZV8 630 aa6.88□□□□□ -1.31
SMG1-217ENST00000569764 LRFN1Q9P244 771 aa6.88□□□□□ -1.31
SMG1-217ENST00000569764 FAM153AQ9UHL3 310 aa6.88□□□□□ -1.31
SMG1-217ENST00000569764 CYTH4Q9UIA0 394 aa6.88□□□□□ -1.31
SMG1-217ENST00000569764 ERVK-19Q9WJR5 959 aa6.88□□□□□ -1.31
SMG1-217ENST00000569764 BZW2Q9Y6E2 419 aaKnown RBP6.88□□□□□ -1.31
SMG1-217ENST00000569764 LRRC14BA6NHZ5 514 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 KRIT1O00522 736 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 MCF2LO15068 1137 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 MAGEB3O15480 346 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 YKT6O15498 198 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 RNGTTO60942 597 aaKnown RBP6.87□□□□□ -1.31
SMG1-217ENST00000569764 CNOT4O95628 575 aaKnown RBP6.87□□□□□ -1.31
SMG1-217ENST00000569764 THP07101 528 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 VAV1P15498 845 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 AVPR1AP37288 418 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 RABIFP47224 123 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 ATP2C1P98194 919 aaPredicted RBP6.87□□□□□ -1.31
SMG1-217ENST00000569764 PCBP2Q15366 365 aaKnown RBP eCLIP6.87□□□□□ -1.31
SMG1-217ENST00000569764 STX1AQ16623 288 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 TTC38Q5R3I4 469 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 ARHGAP36Q6ZRI8 547 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 GPR155Q7Z3F1 870 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 PALM2Q8IXS6 379 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 ATG16L2Q8NAA4 619 aa6.87□□□□□ -1.31
SMG1-217ENST00000569764 C3orf58Q8NDZ4 430 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms