RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 ZC3H12AQ5D1E8 599 aaKnown RBP24.34■■□□□ 1.49
RAB40C-212ENST00000569575 ADGRF1Q5T601 910 aa24.34■■□□□ 1.49
RAB40C-212ENST00000569575 POTEHQ6S545 545 aa24.34■■□□□ 1.49
RAB40C-212ENST00000569575 CPXM2Q8N436 756 aa24.34■■□□□ 1.49
RAB40C-212ENST00000569575 TKTL2Q9H0I9 626 aa24.34■■□□□ 1.49
RAB40C-212ENST00000569575 OSBPL2Q9H1P3 480 aa24.34■■□□□ 1.49
RAB40C-212ENST00000569575 PYCARDQ9ULZ3 195 aa24.34■■□□□ 1.49
RAB40C-212ENST00000569575 TFR2Q9UP52 801 aa24.34■■□□□ 1.49
RAB40C-212ENST00000569575 ZKSCAN5Q9Y2L8 839 aa24.34■■□□□ 1.49
RAB40C-212ENST00000569575 SBDSQ9Y3A5 250 aaKnown RBP eCLIP24.34■■□□□ 1.49
RAB40C-212ENST00000569575 C2CD4DB7Z1M9 353 aa24.33■■□□□ 1.49
RAB40C-212ENST00000569575 BUB1O43683 1085 aa24.33■■□□□ 1.49
RAB40C-212ENST00000569575 ACSL4O60488 711 aa24.33■■□□□ 1.49
RAB40C-212ENST00000569575 GREM1O60565 184 aa24.33■■□□□ 1.49
RAB40C-212ENST00000569575 TFE3P19532 575 aaPredicted RBP24.33■■□□□ 1.49
RAB40C-212ENST00000569575 CORO1AP31146 461 aaKnown RBP24.33■■□□□ 1.49
RAB40C-212ENST00000569575 KCNQ1P51787 676 aa24.33■■□□□ 1.49
RAB40C-212ENST00000569575 ZXDBP98169 803 aa24.33■■□□□ 1.49
RAB40C-212ENST00000569575 HTR4Q13639 388 aa24.33■■□□□ 1.49
RAB40C-212ENST00000569575 PDGFRLQ15198 375 aa24.33■■□□□ 1.49
RAB40C-212ENST00000569575 ERMARDQ5T6L9 678 aa24.33■■□□□ 1.49
RAB40C-212ENST00000569575 SCYL2Q6P3W7 929 aa24.33■■□□□ 1.49
RAB40C-212ENST00000569575 RHOT1Q8IXI2 618 aa24.33■■□□□ 1.49
RAB40C-212ENST00000569575 FAM217AQ8IXS0 508 aa24.33■■□□□ 1.49
RAB40C-212ENST00000569575 YAF2Q8IY57 180 aa24.33■■□□□ 1.49
RAB40C-212ENST00000569575 LRRC57Q8N9N7 239 aa24.33■■□□□ 1.49
RAB40C-212ENST00000569575 CCL26Q9Y258 94 aa24.33■■□□□ 1.49
RAB40C-212ENST00000569575 SYNJ2BP-COX16A0A087WUM0 186 aa24.32■■□□□ 1.48
RAB40C-212ENST00000569575 MIF4GDA9UHW6 222 aaKnown RBP24.32■■□□□ 1.48
RAB40C-212ENST00000569575 CHADO15335 359 aa24.32■■□□□ 1.48
RAB40C-212ENST00000569575 SPOPO43791 374 aa24.32■■□□□ 1.48
RAB40C-212ENST00000569575 KIF5CO60282 957 aa24.32■■□□□ 1.48
RAB40C-212ENST00000569575 IL9P15248 144 aa24.32■■□□□ 1.48
RAB40C-212ENST00000569575 MLLT6P55198 1093 aaPredicted RBP24.32■■□□□ 1.48
RAB40C-212ENST00000569575 EFHC2Q5JST6 749 aa24.32■■□□□ 1.48
RAB40C-212ENST00000569575 SH3PXD2AQ5TCZ1 1133 aa24.32■■□□□ 1.48
RAB40C-212ENST00000569575 TANGO2Q6ICL3 276 aa24.32■■□□□ 1.48
RAB40C-212ENST00000569575 FAM131BQ86XD5 332 aa24.32■■□□□ 1.48
RAB40C-212ENST00000569575 ARFGAP1Q8N6T3 406 aa24.32■■□□□ 1.48
RAB40C-212ENST00000569575 OSCP1Q8WVF1 389 aa24.32■■□□□ 1.48
RAB40C-212ENST00000569575 BTBD6Q96KE9 485 aa24.32■■□□□ 1.48
RAB40C-212ENST00000569575 RPGRIP1Q96KN7 1286 aa24.32■■□□□ 1.48
RAB40C-212ENST00000569575 ASB2Q96Q27 587 aa24.32■■□□□ 1.48
RAB40C-212ENST00000569575 ADAM33Q9BZ11 813 aa24.32■■□□□ 1.48
RAB40C-212ENST00000569575 COX16Q9P0S2 106 aa24.32■■□□□ 1.48
RAB40C-212ENST00000569575 CALCOCO1Q9P1Z2 691 aa24.32■■□□□ 1.48
RAB40C-212ENST00000569575 CCDC66A2RUB6 948 aa24.31■■□□□ 1.48
RAB40C-212ENST00000569575 PSTPIP1O43586 416 aa24.31■■□□□ 1.48
RAB40C-212ENST00000569575 COMTP21964 271 aa24.31■■□□□ 1.48
RAB40C-212ENST00000569575 VIPR2P41587 438 aa24.31■■□□□ 1.48
RAB40C-212ENST00000569575 VSIG1Q86XK7 387 aa24.31■■□□□ 1.48
RAB40C-212ENST00000569575 DENND1CQ8IV53 801 aa24.31■■□□□ 1.48
RAB40C-212ENST00000569575 TRMT61BQ9BVS5 477 aaKnown RBP24.31■■□□□ 1.48
RAB40C-212ENST00000569575 SMG9Q9H0W8 520 aaKnown RBP24.31■■□□□ 1.48
RAB40C-212ENST00000569575 TRPV5Q9NQA5 729 aa24.31■■□□□ 1.48
RAB40C-212ENST00000569575 PRDM6Q9NQX0 595 aa24.31■■□□□ 1.48
RAB40C-212ENST00000569575 DDX56Q9NY93 547 aaKnown RBP24.31■■□□□ 1.48
RAB40C-212ENST00000569575 DONSONQ9NYP3 566 aa24.31■■□□□ 1.48
RAB40C-212ENST00000569575 TRIM10Q9UDY6 481 aa24.31■■□□□ 1.48
RAB40C-212ENST00000569575 AMFRQ9UKV5 643 aa24.31■■□□□ 1.48
RAB40C-212ENST00000569575 AGO1Q9UL18 857 aaKnown RBP24.31■■□□□ 1.48
RAB40C-212ENST00000569575 FZD10Q9ULW2 581 aa24.31■■□□□ 1.48
RAB40C-212ENST00000569575 GRID2IPA4D2P6 1211 aa24.3■■□□□ 1.48
RAB40C-212ENST00000569575 PAGE1O75459 146 aa24.3■■□□□ 1.48
RAB40C-212ENST00000569575 MOCS3O95396 460 aa24.3■■□□□ 1.48
RAB40C-212ENST00000569575 KLKB1P03952 638 aa24.3■■□□□ 1.48
RAB40C-212ENST00000569575 HMBSP08397 361 aa24.3■■□□□ 1.48
RAB40C-212ENST00000569575 MPP7Q5T2T1 576 aa24.3■■□□□ 1.48
RAB40C-212ENST00000569575 TTC39BQ5VTQ0 682 aaPredicted RBP24.3■■□□□ 1.48
RAB40C-212ENST00000569575 PARM1Q6UWI2 310 aa24.3■■□□□ 1.48
RAB40C-212ENST00000569575 VITQ6UXI7 678 aa24.3■■□□□ 1.48
RAB40C-212ENST00000569575 PEX26Q7Z412 305 aa24.3■■□□□ 1.48
RAB40C-212ENST00000569575 MAP7D3Q8IWC1 876 aa24.3■■□□□ 1.48
RAB40C-212ENST00000569575 ZNF557Q8N988 423 aaPredicted RBP24.3■■□□□ 1.48
RAB40C-212ENST00000569575 FGF14Q92915 247 aa24.3■■□□□ 1.48
RAB40C-212ENST00000569575 C19orf67A6NJJ6 358 aa24.29■■□□□ 1.48
RAB40C-212ENST00000569575 TMEM110-MUSTN1A8MSY1 372 aa24.29■■□□□ 1.48
RAB40C-212ENST00000569575 PALMO75781 387 aa24.29■■□□□ 1.48
RAB40C-212ENST00000569575 TUBB4AP04350 444 aa24.29■■□□□ 1.48
RAB40C-212ENST00000569575 IRF1P10914 325 aa24.29■■□□□ 1.48
RAB40C-212ENST00000569575 L1CAMP32004 1257 aa24.29■■□□□ 1.48
RAB40C-212ENST00000569575 IFNAR2P48551 515 aa24.29■■□□□ 1.48
RAB40C-212ENST00000569575 HCAR3P49019 387 aa24.29■■□□□ 1.48
RAB40C-212ENST00000569575 SLC25A11Q02978 314 aaKnown RBP24.29■■□□□ 1.48
RAB40C-212ENST00000569575 NR1H3Q13133 447 aa24.29■■□□□ 1.48
RAB40C-212ENST00000569575 PDK2Q15119 407 aa24.29■■□□□ 1.48
RAB40C-212ENST00000569575 LRRC31Q6UY01 552 aa24.29■■□□□ 1.48
RAB40C-212ENST00000569575 IRF7Q92985 503 aa24.29■■□□□ 1.48
RAB40C-212ENST00000569575 ATP2A3Q93084 1043 aa24.29■■□□□ 1.48
RAB40C-212ENST00000569575 FAM83CQ9BQN1 747 aa24.29■■□□□ 1.48
RAB40C-212ENST00000569575 PRDM16Q9HAZ2 1276 aa24.29■■□□□ 1.48
RAB40C-212ENST00000569575 KCNK12Q9HB15 430 aa24.29■■□□□ 1.48
RAB40C-212ENST00000569575 DUS2Q9NX74 493 aaKnown RBP24.29■■□□□ 1.48
RAB40C-212ENST00000569575 TRMT1Q9NXH9 659 aaKnown RBP24.29■■□□□ 1.48
RAB40C-212ENST00000569575 RCOR3Q9P2K3 495 aaPredicted RBP24.29■■□□□ 1.48
RAB40C-212ENST00000569575 NUMBLQ9Y6R0 609 aa24.29■■□□□ 1.48
RAB40C-212ENST00000569575 A0A0U1RQJ8 604 aa24.28■■□□□ 1.48
RAB40C-212ENST00000569575 TYW5A2RUC4 315 aaKnown RBP24.28■■□□□ 1.48
RAB40C-212ENST00000569575 ZNF487B1APH4 448 aa24.28■■□□□ 1.48
RAB40C-212ENST00000569575 NFATC1O95644 943 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms