RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 STRNO43815 780 aa9.04□□□□□ -0.96
LINC00558-201ENST00000569422 DCTN3O75935 186 aa9.04□□□□□ -0.96
LINC00558-201ENST00000569422 KRT37O76014 449 aa9.04□□□□□ -0.96
LINC00558-201ENST00000569422 ANP32DO95626 131 aa9.04□□□□□ -0.96
LINC00558-201ENST00000569422 DARSP14868 501 aaKnown RBP9.04□□□□□ -0.96
LINC00558-201ENST00000569422 TGM2P21980 687 aa9.04□□□□□ -0.96
LINC00558-201ENST00000569422 BCAT1P54687 386 aa9.04□□□□□ -0.96
LINC00558-201ENST00000569422 GSCP56915 257 aaPredicted RBP9.04□□□□□ -0.96
LINC00558-201ENST00000569422 STILQ15468 1287 aa9.04□□□□□ -0.96
LINC00558-201ENST00000569422 WSCD1Q658N2 575 aa9.04□□□□□ -0.96
LINC00558-201ENST00000569422 HFE2Q6ZVN8 426 aa9.04□□□□□ -0.96
LINC00558-201ENST00000569422 TTC7BQ86TV6 843 aa9.04□□□□□ -0.96
LINC00558-201ENST00000569422 TLK2Q86UE8 772 aa9.04□□□□□ -0.96
LINC00558-201ENST00000569422 NDUFAF2Q8N183 169 aa9.04□□□□□ -0.96
LINC00558-201ENST00000569422 ANKRD52Q8NB46 1076 aa9.04□□□□□ -0.96
LINC00558-201ENST00000569422 UTP4Q969X6 686 aaKnown RBP9.04□□□□□ -0.96
LINC00558-201ENST00000569422 PTPN18Q99952 460 aa9.04□□□□□ -0.96
LINC00558-201ENST00000569422 LRRC4Q9HBW1 653 aa9.04□□□□□ -0.96
LINC00558-201ENST00000569422 MKS1Q9NXB0 559 aa9.04□□□□□ -0.96
LINC00558-201ENST00000569422 UBQLN1Q9UMX0 589 aaKnown RBP9.04□□□□□ -0.96
LINC00558-201ENST00000569422 DIAPH2O60879 1101 aa9.04□□□□□ -0.96
LINC00558-201ENST00000569422 SLC8A1P32418 973 aa9.04□□□□□ -0.96
LINC00558-201ENST00000569422 ABCG1P45844 678 aa9.04□□□□□ -0.96
LINC00558-201ENST00000569422 COL19A1Q14993 1142 aa9.04□□□□□ -0.96
LINC00558-201ENST00000569422 SNX17Q15036 470 aa9.04□□□□□ -0.96
LINC00558-201ENST00000569422 TTC39BQ5VTQ0 682 aaPredicted RBP9.04□□□□□ -0.96
LINC00558-201ENST00000569422 SYPL2Q5VXT5 272 aa9.04□□□□□ -0.96
LINC00558-201ENST00000569422 OLFML2BQ68BL8 750 aa9.04□□□□□ -0.96
LINC00558-201ENST00000569422 SLC9A4Q6AI14 798 aa9.04□□□□□ -0.96
LINC00558-201ENST00000569422 CCDC91Q7Z6B0 441 aa9.04□□□□□ -0.96
LINC00558-201ENST00000569422 OSTM1Q86WC4 334 aa9.04□□□□□ -0.96
LINC00558-201ENST00000569422 NT5DC4Q86YG4 428 aa9.04□□□□□ -0.96
LINC00558-201ENST00000569422 CDKL3Q8IVW4 592 aaPredicted RBP9.04□□□□□ -0.96
LINC00558-201ENST00000569422 COLGALT1Q8NBJ5 622 aa9.04□□□□□ -0.96
LINC00558-201ENST00000569422 APOPT1Q96IL0 206 aa9.04□□□□□ -0.96
LINC00558-201ENST00000569422 TMEM120AQ9BXJ8 343 aa9.04□□□□□ -0.96
LINC00558-201ENST00000569422 BOLA2-SMG1P6H3BVE0 249 aa9.04□□□□□ -0.96
LINC00558-201ENST00000569422 I3L4J1 428 aa9.04□□□□□ -0.96
LINC00558-201ENST00000569422 MFSD11O43934 449 aa9.04□□□□□ -0.96
LINC00558-201ENST00000569422 APOEP02649 317 aa9.04□□□□□ -0.96
LINC00558-201ENST00000569422 SNRPAP09012 282 aaKnown RBP9.04□□□□□ -0.96
LINC00558-201ENST00000569422 MYL2P10916 166 aa9.04□□□□□ -0.96
LINC00558-201ENST00000569422 VAV1P15498 845 aa9.04□□□□□ -0.96
LINC00558-201ENST00000569422 SERPINB4P48594 390 aa9.04□□□□□ -0.96
LINC00558-201ENST00000569422 CLK1P49759 484 aaKnown RBP9.04□□□□□ -0.96
LINC00558-201ENST00000569422 TAF6P49848 677 aa9.04□□□□□ -0.96
LINC00558-201ENST00000569422 SESN3P58005 492 aa9.04□□□□□ -0.96
LINC00558-201ENST00000569422 MFSD10Q14728 455 aa9.04□□□□□ -0.96
LINC00558-201ENST00000569422 GPR162Q16538 588 aa9.04□□□□□ -0.96
LINC00558-201ENST00000569422 SLC45A4Q5BKX6 768 aa9.04□□□□□ -0.96
LINC00558-201ENST00000569422 ANKRD20A3Q5VUR7 823 aa9.04□□□□□ -0.96
LINC00558-201ENST00000569422 PPP1R14CQ8TAE6 165 aa9.04□□□□□ -0.96
LINC00558-201ENST00000569422 C17orf50Q8WW18 174 aa9.04□□□□□ -0.96
LINC00558-201ENST00000569422 LPPQ93052 612 aa9.04□□□□□ -0.96
LINC00558-201ENST00000569422 KCNK16Q96T55 309 aa9.04□□□□□ -0.96
LINC00558-201ENST00000569422 ZNF670Q9BS34 389 aa9.04□□□□□ -0.96
LINC00558-201ENST00000569422 DHRS4Q9BTZ2 278 aa9.04□□□□□ -0.96
LINC00558-201ENST00000569422 TBC1D10AQ9BXI6 508 aa9.04□□□□□ -0.96
LINC00558-201ENST00000569422 TSPYL2Q9H2G4 693 aaPredicted RBP9.04□□□□□ -0.96
LINC00558-201ENST00000569422 PLSCR2Q9NRY7 297 aa9.04□□□□□ -0.96
LINC00558-201ENST00000569422 MTMR10Q9NXD2 777 aa9.04□□□□□ -0.96
LINC00558-201ENST00000569422 FLRT1Q9NZU1 646 aa9.04□□□□□ -0.96
LINC00558-201ENST00000569422 SFMBT1Q9UHJ3 866 aa9.04□□□□□ -0.96
LINC00558-201ENST00000569422 SLC45A1Q9Y2W3 748 aa9.04□□□□□ -0.96
LINC00558-201ENST00000569422 SCN1AP35498 2009 aa9.03□□□□□ -0.96
LINC00558-201ENST00000569422 BCLAF3A2AJT9 711 aaKnown RBP9.03□□□□□ -0.96
LINC00558-201ENST00000569422 RRN3P2A6NIE6 340 aa9.03□□□□□ -0.96
LINC00558-201ENST00000569422 TM9SF1O15321 606 aa9.03□□□□□ -0.96
LINC00558-201ENST00000569422 T-ENOLP0DO92 83 aa9.03□□□□□ -0.96
LINC00558-201ENST00000569422 RCN2Q14257 317 aa9.03□□□□□ -0.96
LINC00558-201ENST00000569422 CHI3L2Q15782 390 aa9.03□□□□□ -0.96
LINC00558-201ENST00000569422 ANKRD20A2Q5SQ80 823 aa9.03□□□□□ -0.96
LINC00558-201ENST00000569422 ANKRD20A1Q5TYW2 823 aa9.03□□□□□ -0.96
LINC00558-201ENST00000569422 NCBP2-AS2Q69YL0 99 aa9.03□□□□□ -0.96
LINC00558-201ENST00000569422 ASRGL1Q7L266 308 aa9.03□□□□□ -0.96
LINC00558-201ENST00000569422 ALYREFQ86V81 257 aaKnown RBP9.03□□□□□ -0.96
LINC00558-201ENST00000569422 ARID3BQ8IVW6 561 aaPredicted RBP9.03□□□□□ -0.96
LINC00558-201ENST00000569422 SIX6OS1Q8N1H7 587 aa9.03□□□□□ -0.96
LINC00558-201ENST00000569422 B3GALNT2Q8NCR0 500 aa9.03□□□□□ -0.96
LINC00558-201ENST00000569422 SLC7A14Q8TBB6 771 aa9.03□□□□□ -0.96
LINC00558-201ENST00000569422 HASPINQ8TF76 798 aa9.03□□□□□ -0.96
LINC00558-201ENST00000569422 NSMCE1Q8WV22 266 aa9.03□□□□□ -0.96
LINC00558-201ENST00000569422 TFB1MQ8WVM0 346 aaKnown RBP9.03□□□□□ -0.96
LINC00558-201ENST00000569422 HTR3CQ8WXA8 447 aa9.03□□□□□ -0.96
LINC00558-201ENST00000569422 EDEM1Q92611 657 aa9.03□□□□□ -0.96
LINC00558-201ENST00000569422 USP6NLQ92738 828 aa9.03□□□□□ -0.96
LINC00558-201ENST00000569422 N4BP2L2Q92802 583 aaPredicted RBP9.03□□□□□ -0.96
LINC00558-201ENST00000569422 APOL2Q9BQE5 337 aa9.03□□□□□ -0.96
LINC00558-201ENST00000569422 PLEKHA5Q9HAU0 1116 aa9.03□□□□□ -0.96
LINC00558-201ENST00000569422 PLAC1Q9HBJ0 212 aa9.03□□□□□ -0.96
LINC00558-201ENST00000569422 IPPQ9Y573 584 aa9.03□□□□□ -0.96
LINC00558-201ENST00000569422 SNX10Q9Y5X0 201 aa9.03□□□□□ -0.96
LINC00558-201ENST00000569422 COL1A2P08123 1366 aa9.03□□□□□ -0.96
LINC00558-201ENST00000569422 PTPRFP10586 1907 aa9.03□□□□□ -0.96
LINC00558-201ENST00000569422 MGAMO43451 1857 aa9.03□□□□□ -0.96
LINC00558-201ENST00000569422 MDM4O15151 490 aa9.03□□□□□ -0.96
LINC00558-201ENST00000569422 MGAT1P26572 445 aa9.03□□□□□ -0.96
LINC00558-201ENST00000569422 SLC8A3P57103 927 aa9.03□□□□□ -0.96
LINC00558-201ENST00000569422 SNX16P57768 344 aa9.03□□□□□ -0.96
LINC00558-201ENST00000569422 LILRA4P59901 499 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms