RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 FAM149B1Q96BN6 582 aa30.59■■■□□ 2.49
RAB40C-211ENST00000568586 TMA16Q96EY4 203 aaKnown RBP30.59■■■□□ 2.49
RAB40C-211ENST00000568586 FCRL2Q96LA5 508 aaPredicted RBP30.59■■■□□ 2.49
RAB40C-211ENST00000568586 POPDC2Q9HBU9 364 aa30.59■■■□□ 2.49
RAB40C-211ENST00000568586 IRAK2O43187 625 aa30.58■■■□□ 2.49
RAB40C-211ENST00000568586 IGLV3-25P01717 112 aa30.58■■■□□ 2.49
RAB40C-211ENST00000568586 GLI1P08151 1106 aa30.58■■■□□ 2.49
RAB40C-211ENST00000568586 SDHBP21912 280 aa30.58■■■□□ 2.49
RAB40C-211ENST00000568586 SLC11A2P49281 568 aa30.58■■■□□ 2.49
RAB40C-211ENST00000568586 EIF4EBP2Q13542 120 aaPredicted RBP30.58■■■□□ 2.49
RAB40C-211ENST00000568586 PUM1Q14671 1186 aaKnown RBP eCLIP30.58■■■□□ 2.49
RAB40C-211ENST00000568586 FAM133BQ5BKY9 247 aaKnown RBP30.58■■■□□ 2.49
RAB40C-211ENST00000568586 SYPL2Q5VXT5 272 aa30.58■■■□□ 2.49
RAB40C-211ENST00000568586 PMS2CLQ68D20 193 aa30.58■■■□□ 2.49
RAB40C-211ENST00000568586 ANKS1BQ7Z6G8 1248 aa30.58■■■□□ 2.49
RAB40C-211ENST00000568586 CPXM1Q96SM3 734 aa30.58■■■□□ 2.49
RAB40C-211ENST00000568586 ARRDC1-AS1Q9H2J1 176 aa30.58■■■□□ 2.49
RAB40C-211ENST00000568586 PLCB1Q9NQ66 1216 aa30.58■■■□□ 2.49
RAB40C-211ENST00000568586 ANO10Q9NW15 660 aa30.58■■■□□ 2.49
RAB40C-211ENST00000568586 ASNSD1Q9NWL6 643 aa30.58■■■□□ 2.49
RAB40C-211ENST00000568586 THAP10Q9P2Z0 257 aaPredicted RBP30.58■■■□□ 2.49
RAB40C-211ENST00000568586 TIMM44O43615 452 aa30.57■■■□□ 2.48
RAB40C-211ENST00000568586 ACSL4O60488 711 aa30.57■■■□□ 2.48
RAB40C-211ENST00000568586 ZNF806P0C7X5 589 aa30.57■■■□□ 2.48
RAB40C-211ENST00000568586 UCHL3P15374 230 aa30.57■■■□□ 2.48
RAB40C-211ENST00000568586 GABRG2P18507 467 aa30.57■■■□□ 2.48
RAB40C-211ENST00000568586 DRAP1Q14919 205 aaPredicted RBP30.57■■■□□ 2.48
RAB40C-211ENST00000568586 E2F5Q15329 346 aa30.57■■■□□ 2.48
RAB40C-211ENST00000568586 MAP7D1Q3KQU3 841 aa30.57■■■□□ 2.48
RAB40C-211ENST00000568586 PIK3R6Q5UE93 754 aa30.57■■■□□ 2.48
RAB40C-211ENST00000568586 PRR23CQ6ZRP0 262 aa30.57■■■□□ 2.48
RAB40C-211ENST00000568586 KIAA0907Q7Z7F0 614 aaPredicted RBP30.57■■■□□ 2.48
RAB40C-211ENST00000568586 ABCA7Q8IZY2 2146 aa30.57■■■□□ 2.48
RAB40C-211ENST00000568586 DDX51Q8N8A6 666 aaKnown RBP eCLIP30.57■■■□□ 2.481e-6■■■□□ 14.6
RAB40C-211ENST00000568586 HMGB4Q8WW32 186 aa30.57■■■□□ 2.48
RAB40C-211ENST00000568586 PPP1R13BQ96KQ4 1090 aa30.57■■■□□ 2.48
RAB40C-211ENST00000568586 ELOVL2Q9NXB9 296 aa30.57■■■□□ 2.48
RAB40C-211ENST00000568586 TJP2Q9UDY2 1190 aa30.57■■■□□ 2.48
RAB40C-211ENST00000568586 FHOD1Q9Y613 1164 aa30.57■■■□□ 2.48
RAB40C-211ENST00000568586 TSPAN3O60637 253 aa30.56■■■□□ 2.48
RAB40C-211ENST00000568586 PNMA6AP0CW24 399 aaPredicted RBP30.56■■■□□ 2.48
RAB40C-211ENST00000568586 WASP42768 502 aa30.56■■■□□ 2.48
RAB40C-211ENST00000568586 BYSLQ13895 437 aaKnown RBP30.56■■■□□ 2.48
RAB40C-211ENST00000568586 KRT31Q15323 416 aa30.56■■■□□ 2.48
RAB40C-211ENST00000568586 RSPO4Q2I0M5 234 aaPredicted RBP30.56■■■□□ 2.48
RAB40C-211ENST00000568586 SASS6Q6UVJ0 657 aa30.56■■■□□ 2.48
RAB40C-211ENST00000568586 ERMP1Q7Z2K6 904 aa30.56■■■□□ 2.48
RAB40C-211ENST00000568586 TAC4Q86UU9 113 aa30.56■■■□□ 2.48
RAB40C-211ENST00000568586 IPO4Q8TEX9 1081 aaKnown RBP30.56■■■□□ 2.48
RAB40C-211ENST00000568586 TAB2Q9NYJ8 693 aa30.56■■■□□ 2.48
RAB40C-211ENST00000568586 INVSQ9Y283 1065 aa30.56■■■□□ 2.48
RAB40C-211ENST00000568586 DYNC1LI1Q9Y6G9 523 aaKnown RBP30.56■■■□□ 2.48
RAB40C-211ENST00000568586 BCKDHBP21953 392 aa30.55■■■□□ 2.48
RAB40C-211ENST00000568586 CDH5P33151 784 aaPredicted RBP30.55■■■□□ 2.48
RAB40C-211ENST00000568586 KRT9P35527 623 aa30.55■■■□□ 2.48
RAB40C-211ENST00000568586 TMEM215Q68D42 235 aa30.55■■■□□ 2.48
RAB40C-211ENST00000568586 NADSYN1Q6IA69 706 aa30.55■■■□□ 2.48
RAB40C-211ENST00000568586 KIAA1211LQ6NV74 962 aa30.55■■■□□ 2.48
RAB40C-211ENST00000568586 UCMAQ8WVF2 138 aa30.55■■■□□ 2.48
RAB40C-211ENST00000568586 NOX5Q96PH1 765 aa30.55■■■□□ 2.48
RAB40C-211ENST00000568586 SLC2A13Q96QE2 648 aa30.55■■■□□ 2.48
RAB40C-211ENST00000568586 STK33Q9BYT3 514 aa30.55■■■□□ 2.48
RAB40C-211ENST00000568586 FANCLQ9NW38 375 aa30.55■■■□□ 2.48
RAB40C-211ENST00000568586 CACNA2D2Q9NY47 1150 aa30.55■■■□□ 2.48
RAB40C-211ENST00000568586 BCCIPQ9P287 314 aaKnown RBP eCLIP30.55■■■□□ 2.48
RAB40C-211ENST00000568586 STON1Q9Y6Q2 735 aa30.55■■■□□ 2.48
RAB40C-211ENST00000568586 RALGAPA1Q6GYQ0 2036 aa30.55■■■□□ 2.48
RAB40C-211ENST00000568586 PLXND1Q9Y4D7 1925 aa30.54■■■□□ 2.48
RAB40C-211ENST00000568586 CAPN9O14815 690 aa30.54■■■□□ 2.48
RAB40C-211ENST00000568586 HLA-FP30511 346 aa30.54■■■□□ 2.48
RAB40C-211ENST00000568586 SLC6A4P31645 630 aa30.54■■■□□ 2.48
RAB40C-211ENST00000568586 TAF5Q15542 800 aa30.54■■■□□ 2.48
RAB40C-211ENST00000568586 SPDYCQ5MJ68 293 aa30.54■■■□□ 2.48
RAB40C-211ENST00000568586 CCDC183Q5T5S1 534 aa30.54■■■□□ 2.48
RAB40C-211ENST00000568586 C11orf57Q6ZUT1 292 aaPredicted RBP30.54■■■□□ 2.48
RAB40C-211ENST00000568586 PASD1Q8IV76 773 aa30.54■■■□□ 2.48
RAB40C-211ENST00000568586 DDX50Q9BQ39 737 aaKnown RBP30.54■■■□□ 2.48
RAB40C-211ENST00000568586 BCLAF3A2AJT9 711 aaKnown RBP30.53■■■□□ 2.48
RAB40C-211ENST00000568586 PES1O00541 588 aaKnown RBP30.53■■■□□ 2.48
RAB40C-211ENST00000568586 CYP11B1P15538 503 aa30.53■■■□□ 2.48
RAB40C-211ENST00000568586 GBP1P32455 592 aa30.53■■■□□ 2.48
RAB40C-211ENST00000568586 SGSHP51688 502 aa30.53■■■□□ 2.48
RAB40C-211ENST00000568586 SNX16P57768 344 aa30.53■■■□□ 2.48
RAB40C-211ENST00000568586 STX1AQ16623 288 aa30.53■■■□□ 2.48
RAB40C-211ENST00000568586 EFHC1Q5JVL4 640 aa30.53■■■□□ 2.48
RAB40C-211ENST00000568586 C1orf131Q8NDD1 294 aaKnown RBP30.53■■■□□ 2.48
RAB40C-211ENST00000568586 WFIKKN2Q8TEU8 576 aa30.53■■■□□ 2.48
RAB40C-211ENST00000568586 SPACA7Q96KW9 195 aa30.53■■■□□ 2.48
RAB40C-211ENST00000568586 LSM14BQ9BX40 385 aaKnown RBP30.53■■■□□ 2.48
RAB40C-211ENST00000568586 MBD1Q9UIS9 605 aaPredicted RBP30.53■■■□□ 2.48
RAB40C-211ENST00000568586 LAMA1P25391 3075 aa30.53■■■□□ 2.48
RAB40C-211ENST00000568586 GOLGA6L7A0A1B0GV03 622 aa30.52■■■□□ 2.48
RAB40C-211ENST00000568586 LRRC10BA6NIK2 292 aa30.52■■■□□ 2.48
RAB40C-211ENST00000568586 WASH3PC4AMC7 463 aa30.52■■■□□ 2.48
RAB40C-211ENST00000568586 TRUB2O95900 331 aaKnown RBP30.52■■■□□ 2.48
RAB40C-211ENST00000568586 MPLP40238 635 aa30.52■■■□□ 2.48
RAB40C-211ENST00000568586 FOXK2Q01167 660 aa30.52■■■□□ 2.48
RAB40C-211ENST00000568586 RAPGEF1Q13905 1077 aa30.52■■■□□ 2.48
RAB40C-211ENST00000568586 RFWD3Q6PCD5 774 aa30.52■■■□□ 2.48
RAB40C-211ENST00000568586 OLFML1Q6UWY5 402 aa30.52■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 143.9 ms