RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 LAYNQ6UX15 382 aa12.37□□□□□ -0.43
GTF3C1-209ENST00000568569 UNC13DQ70J99 1090 aa12.37□□□□□ -0.43
GTF3C1-209ENST00000568569 DENND1CQ8IV53 801 aa12.37□□□□□ -0.43
GTF3C1-209ENST00000568569 CPXM2Q8N436 756 aa12.37□□□□□ -0.43
GTF3C1-209ENST00000568569 IQUBQ8NA54 791 aa12.37□□□□□ -0.43
GTF3C1-209ENST00000568569 DDI1Q8WTU0 396 aa12.37□□□□□ -0.43
GTF3C1-209ENST00000568569 BIRC7Q96CA5 298 aa12.37□□□□□ -0.43
GTF3C1-209ENST00000568569 CYFIP2Q96F07 1278 aa12.37□□□□□ -0.43
GTF3C1-209ENST00000568569 C7orf25Q9BPX7 421 aa12.37□□□□□ -0.43
GTF3C1-209ENST00000568569 FBRSQ9HAH7 460 aa12.37□□□□□ -0.43
GTF3C1-209ENST00000568569 CLEC4EQ9ULY5 219 aa12.37□□□□□ -0.43
GTF3C1-209ENST00000568569 PCDHGA1Q9Y5H4 931 aa12.37□□□□□ -0.43
GTF3C1-209ENST00000568569 PTPRQQ9UMZ3 2332 aa12.36□□□□□ -0.43
GTF3C1-209ENST00000568569 KCNK3O14649 394 aa12.36□□□□□ -0.43
GTF3C1-209ENST00000568569 TSPAN3O60637 253 aa12.36□□□□□ -0.43
GTF3C1-209ENST00000568569 FSBPO95073 299 aa12.36□□□□□ -0.43
GTF3C1-209ENST00000568569 ASS1P00966 412 aaKnown RBP12.36□□□□□ -0.43
GTF3C1-209ENST00000568569 CDK4P11802 303 aa12.36□□□□□ -0.43
GTF3C1-209ENST00000568569 JUPP14923 745 aa12.36□□□□□ -0.43
GTF3C1-209ENST00000568569 ITPKBP27987 946 aa12.36□□□□□ -0.43
GTF3C1-209ENST00000568569 PIK3CAP42336 1068 aa12.36□□□□□ -0.43
GTF3C1-209ENST00000568569 CTSKP43235 329 aa12.36□□□□□ -0.43
GTF3C1-209ENST00000568569 BCAT1P54687 386 aa12.36□□□□□ -0.43
GTF3C1-209ENST00000568569 IL9RQ01113 521 aa12.36□□□□□ -0.43
GTF3C1-209ENST00000568569 EFEMP1Q12805 493 aa12.36□□□□□ -0.43
GTF3C1-209ENST00000568569 TTC31Q49AM3 519 aaPredicted RBP12.36□□□□□ -0.43
GTF3C1-209ENST00000568569 FNDC3BQ53EP0 1204 aaKnown RBP12.36□□□□□ -0.43
GTF3C1-209ENST00000568569 LRRC69Q6ZNQ3 347 aa12.36□□□□□ -0.43
GTF3C1-209ENST00000568569 LSM14AQ8ND56 463 aaKnown RBP12.36□□□□□ -0.43
GTF3C1-209ENST00000568569 TWNKQ96RR1 684 aa12.36□□□□□ -0.43
GTF3C1-209ENST00000568569 NT5C1AQ9BXI3 368 aa12.36□□□□□ -0.43
GTF3C1-209ENST00000568569 TMEM245Q9H330 911 aa12.36□□□□□ -0.43
GTF3C1-209ENST00000568569 PRORYQ9H606 182 aa12.36□□□□□ -0.43
GTF3C1-209ENST00000568569 MAGEF1Q9HAY2 307 aa12.36□□□□□ -0.43
GTF3C1-209ENST00000568569 SGK2Q9HBY8 427 aa12.36□□□□□ -0.43
GTF3C1-209ENST00000568569 MARCH2Q9P0N8 246 aa12.36□□□□□ -0.43
GTF3C1-209ENST00000568569 STRIP2Q9ULQ0 834 aa12.36□□□□□ -0.43
GTF3C1-209ENST00000568569 PLA2G4CQ9UP65 541 aa12.36□□□□□ -0.43
GTF3C1-209ENST00000568569 USP3Q9Y6I4 520 aa12.36□□□□□ -0.43
GTF3C1-209ENST00000568569 ZNF462Q96JM2 2506 aa12.36□□□□□ -0.43
GTF3C1-209ENST00000568569 A0A1B0GTQ1 180 aa12.35□□□□□ -0.43
GTF3C1-209ENST00000568569 RRP8O43159 456 aaKnown RBP12.35□□□□□ -0.43
GTF3C1-209ENST00000568569 KIF20AO95235 890 aa12.35□□□□□ -0.43
GTF3C1-209ENST00000568569 DNTTP04053 509 aa12.35□□□□□ -0.43
GTF3C1-209ENST00000568569 SYT1P21579 422 aa12.35□□□□□ -0.43
GTF3C1-209ENST00000568569 EIF2S3P41091 472 aaKnown RBP12.35□□□□□ -0.43
GTF3C1-209ENST00000568569 NASPP49321 788 aaPredicted RBP12.35□□□□□ -0.43
GTF3C1-209ENST00000568569 C21orf59P57076 290 aa12.35□□□□□ -0.43
GTF3C1-209ENST00000568569 DLG4P78352 724 aa12.35□□□□□ -0.43
GTF3C1-209ENST00000568569 PDE4CQ08493 712 aa12.35□□□□□ -0.43
GTF3C1-209ENST00000568569 CUL4AQ13619 759 aa12.35□□□□□ -0.43
GTF3C1-209ENST00000568569 STK38Q15208 465 aa12.35□□□□□ -0.43
GTF3C1-209ENST00000568569 KCNT1Q5JUK3 1230 aa12.35□□□□□ -0.43
GTF3C1-209ENST00000568569 SPOPLQ6IQ16 392 aa12.35□□□□□ -0.43
GTF3C1-209ENST00000568569 SV2AQ7L0J3 742 aa12.35□□□□□ -0.43
GTF3C1-209ENST00000568569 RSRC2Q7L4I2 434 aaKnown RBP12.35□□□□□ -0.43
GTF3C1-209ENST00000568569 FAM217AQ8IXS0 508 aa12.35□□□□□ -0.43
GTF3C1-209ENST00000568569 ARHGAP18Q8N392 663 aa12.35□□□□□ -0.43
GTF3C1-209ENST00000568569 WFIKKN2Q8TEU8 576 aa12.35□□□□□ -0.43
GTF3C1-209ENST00000568569 BAP1Q92560 729 aa12.35□□□□□ -0.43
GTF3C1-209ENST00000568569 FCRL3Q96P31 734 aaPredicted RBP12.35□□□□□ -0.43
GTF3C1-209ENST00000568569 DUSP16Q9BY84 665 aa12.35□□□□□ -0.43
GTF3C1-209ENST00000568569 ACE2Q9BYF1 805 aaPredicted RBP12.35□□□□□ -0.43
GTF3C1-209ENST00000568569 IMPG2Q9BZV3 1241 aa12.35□□□□□ -0.43
GTF3C1-209ENST00000568569 DNAI2Q9GZS0 605 aa12.35□□□□□ -0.43
GTF3C1-209ENST00000568569 UPF2Q9HAU5 1272 aaKnown RBP12.35□□□□□ -0.43
GTF3C1-209ENST00000568569 SLC39A2Q9NP94 309 aa12.35□□□□□ -0.43
GTF3C1-209ENST00000568569 CKAP5Q14008 2032 aa12.35□□□□□ -0.43
GTF3C1-209ENST00000568569 NUMA1Q14980 2115 aa12.34□□□□□ -0.43
GTF3C1-209ENST00000568569 SLC12A8A0AV02 714 aa12.34□□□□□ -0.43
GTF3C1-209ENST00000568569 ENC1O14682 589 aa12.34□□□□□ -0.43
GTF3C1-209ENST00000568569 VILLO15195 856 aa12.34□□□□□ -0.43
GTF3C1-209ENST00000568569 RFPL3O75679 317 aa12.34□□□□□ -0.43
GTF3C1-209ENST00000568569 C1SP09871 688 aa12.34□□□□□ -0.43
GTF3C1-209ENST00000568569 HOXD9P28356 352 aaPredicted RBP12.34□□□□□ -0.43
GTF3C1-209ENST00000568569 HLA-FP30511 346 aa12.34□□□□□ -0.43
GTF3C1-209ENST00000568569 ZNF445P59923 1031 aa12.34□□□□□ -0.43
GTF3C1-209ENST00000568569 RPS14P62263 151 aaKnown RBP12.34□□□□□ -0.43
GTF3C1-209ENST00000568569 RACK1P63244 317 aaKnown RBP12.34□□□□□ -0.43
GTF3C1-209ENST00000568569 SEMG2Q02383 582 aa12.34□□□□□ -0.43
GTF3C1-209ENST00000568569 MPPE1Q53F39 396 aa12.34□□□□□ -0.43
GTF3C1-209ENST00000568569 CHST9Q7L1S5 443 aa12.34□□□□□ -0.43
GTF3C1-209ENST00000568569 SLC9A9Q8IVB4 645 aa12.34□□□□□ -0.43
GTF3C1-209ENST00000568569 ZNF366Q8N895 744 aa12.34□□□□□ -0.43
GTF3C1-209ENST00000568569 LINC00301Q8NCQ3 95 aa12.34□□□□□ -0.43
GTF3C1-209ENST00000568569 TMC2Q8TDI7 906 aa12.34□□□□□ -0.43
GTF3C1-209ENST00000568569 CYB5D2Q8WUJ1 264 aa12.34□□□□□ -0.43
GTF3C1-209ENST00000568569 TMEM174Q8WUU8 243 aa12.34□□□□□ -0.43
GTF3C1-209ENST00000568569 GOLGA1Q92805 767 aa12.34□□□□□ -0.43
GTF3C1-209ENST00000568569 SKA1Q96BD8 255 aa12.34□□□□□ -0.43
GTF3C1-209ENST00000568569 PLD4Q96BZ4 506 aa12.34□□□□□ -0.43
GTF3C1-209ENST00000568569 ELF4Q99607 663 aaPredicted RBP12.34□□□□□ -0.43
GTF3C1-209ENST00000568569 ORAI3Q9BRQ5 295 aa12.34□□□□□ -0.43
GTF3C1-209ENST00000568569 BACH2Q9BYV9 841 aa12.34□□□□□ -0.43
GTF3C1-209ENST00000568569 BLZF1Q9H2G9 400 aa12.34□□□□□ -0.43
GTF3C1-209ENST00000568569 CYP3A43Q9HB55 503 aa12.34□□□□□ -0.43
GTF3C1-209ENST00000568569 AK5Q9Y6K8 562 aa12.34□□□□□ -0.43
GTF3C1-209ENST00000568569 CFAP46Q8IYW2 2715 aa12.34□□□□□ -0.43
GTF3C1-209ENST00000568569 MAST4O15021 2626 aa12.34□□□□□ -0.43
GTF3C1-209ENST00000568569 PVALEFA0A1B0GWK0 134 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms