RNA–Protein interactions for RNA: ENST00000568310.1

DNAAF4-CCPG1-202, Transcript of DNAAF4-CCPG1 readthrough (NMD candidate), humanhuman

TSL 2

Gene DNAAF4-CCPG1, Length 1,293 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF4-CCPG1-202ENST00000568310 TTF1Q15361 905 aaPredicted RBP8.3□□□□□ -1.08
DNAAF4-CCPG1-202ENST00000568310 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.3□□□□□ -1.08
DNAAF4-CCPG1-202ENST00000568310 DPF1Q92782 380 aa8.3□□□□□ -1.08
DNAAF4-CCPG1-202ENST00000568310 FRAT1Q92837 279 aaPredicted RBP8.3□□□□□ -1.08
DNAAF4-CCPG1-202ENST00000568310 RHOBTB2Q9BYZ6 727 aa8.3□□□□□ -1.08
DNAAF4-CCPG1-202ENST00000568310 PNMA8BQ9ULN7 279 aaPredicted RBP8.3□□□□□ -1.08
DNAAF4-CCPG1-202ENST00000568310 LAMB1P07942 1786 aa8.3□□□□□ -1.08
DNAAF4-CCPG1-202ENST00000568310 MYH13Q9UKX3 1938 aa8.29□□□□□ -1.08
DNAAF4-CCPG1-202ENST00000568310 A0A1B0GUL7 405 aa8.29□□□□□ -1.08
DNAAF4-CCPG1-202ENST00000568310 INO80B-WBP1J3KQ70 363 aa8.29□□□□□ -1.08
DNAAF4-CCPG1-202ENST00000568310 AP1G1O43747 822 aa8.29□□□□□ -1.08
DNAAF4-CCPG1-202ENST00000568310 GRPP07492 148 aa8.29□□□□□ -1.08
DNAAF4-CCPG1-202ENST00000568310 HNRNPCP07910 306 aaKnown RBP eCLIP8.29□□□□□ -1.08
DNAAF4-CCPG1-202ENST00000568310 TRIM27P14373 513 aa8.29□□□□□ -1.08
DNAAF4-CCPG1-202ENST00000568310 JUPP14923 745 aa8.29□□□□□ -1.08
DNAAF4-CCPG1-202ENST00000568310 PXNP49023 591 aaPredicted RBP8.29□□□□□ -1.08
DNAAF4-CCPG1-202ENST00000568310 MCL1Q07820 350 aa8.29□□□□□ -1.08
DNAAF4-CCPG1-202ENST00000568310 PPIL2Q13356 520 aa8.29□□□□□ -1.08
DNAAF4-CCPG1-202ENST00000568310 DIS3LQ8TF46 1054 aaKnown RBP8.29□□□□□ -1.08
DNAAF4-CCPG1-202ENST00000568310 STAG1Q8WVM7 1258 aa8.29□□□□□ -1.08
DNAAF4-CCPG1-202ENST00000568310 ARHGAP45Q92619 1136 aa8.29□□□□□ -1.08
DNAAF4-CCPG1-202ENST00000568310 NEUROD6Q96NK8 337 aa8.29□□□□□ -1.08
DNAAF4-CCPG1-202ENST00000568310 PTDSS2Q9BVG9 487 aa8.29□□□□□ -1.08
DNAAF4-CCPG1-202ENST00000568310 INO80BQ9C086 356 aaPredicted RBP8.29□□□□□ -1.08
DNAAF4-CCPG1-202ENST00000568310 DDX56Q9NY93 547 aaKnown RBP8.29□□□□□ -1.08
DNAAF4-CCPG1-202ENST00000568310 RPAP1Q9BWH6 1393 aaPredicted RBP8.29□□□□□ -1.08
DNAAF4-CCPG1-202ENST00000568310 SALL1Q9NSC2 1324 aa8.29□□□□□ -1.08
DNAAF4-CCPG1-202ENST00000568310 E2F8A0AVK6 867 aa8.28□□□□□ -1.08
DNAAF4-CCPG1-202ENST00000568310 IPO8O15397 1037 aaKnown RBP8.28□□□□□ -1.08
DNAAF4-CCPG1-202ENST00000568310 SLC16A3O15427 465 aaKnown RBP8.28□□□□□ -1.08
DNAAF4-CCPG1-202ENST00000568310 TLR5O60602 858 aa8.28□□□□□ -1.08
DNAAF4-CCPG1-202ENST00000568310 TLR2O60603 784 aa8.28□□□□□ -1.08
DNAAF4-CCPG1-202ENST00000568310 WDHD1O75717 1129 aaPredicted RBP8.28□□□□□ -1.08
DNAAF4-CCPG1-202ENST00000568310 PDGFRBP09619 1106 aa8.28□□□□□ -1.08
DNAAF4-CCPG1-202ENST00000568310 FAM163BP0C2L3 166 aa8.28□□□□□ -1.08
DNAAF4-CCPG1-202ENST00000568310 ABCG1P45844 678 aa8.28□□□□□ -1.08
DNAAF4-CCPG1-202ENST00000568310 LILRA4P59901 499 aa8.28□□□□□ -1.08
DNAAF4-CCPG1-202ENST00000568310 PPATQ06203 517 aa8.28□□□□□ -1.08
DNAAF4-CCPG1-202ENST00000568310 SUMO4Q6EEV6 95 aa8.28□□□□□ -1.08
DNAAF4-CCPG1-202ENST00000568310 MAVSQ7Z434 540 aa8.28□□□□□ -1.08
DNAAF4-CCPG1-202ENST00000568310 DZIP1Q86YF9 867 aaKnown RBP8.28□□□□□ -1.08
DNAAF4-CCPG1-202ENST00000568310 CELF5Q8N6W0 485 aaKnown RBP8.28□□□□□ -1.08
DNAAF4-CCPG1-202ENST00000568310 ANKS1AQ92625 1134 aa8.28□□□□□ -1.08
DNAAF4-CCPG1-202ENST00000568310 MOGAT1Q96PD6 335 aa8.28□□□□□ -1.08
DNAAF4-CCPG1-202ENST00000568310 ARHGAP39Q9C0H5 1083 aa8.28□□□□□ -1.08
DNAAF4-CCPG1-202ENST00000568310 CPA4Q9UI42 421 aa8.28□□□□□ -1.08
DNAAF4-CCPG1-202ENST00000568310 ZNF112Q9UJU3 913 aa8.28□□□□□ -1.08
DNAAF4-CCPG1-202ENST00000568310 SERTAD3Q9UJW9 196 aa8.28□□□□□ -1.08
DNAAF4-CCPG1-202ENST00000568310 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.28□□□□□ -1.08
DNAAF4-CCPG1-202ENST00000568310 AK9Q5TCS8 1911 aa8.27□□□□□ -1.09
DNAAF4-CCPG1-202ENST00000568310 A0A088AWK7 358 aa8.27□□□□□ -1.09
DNAAF4-CCPG1-202ENST00000568310 PNMA6EA0A0J9YXQ4 647 aa8.27□□□□□ -1.09
DNAAF4-CCPG1-202ENST00000568310 TARM1B6A8C7 271 aa8.27□□□□□ -1.09
DNAAF4-CCPG1-202ENST00000568310 EN2P19622 333 aaPredicted RBP8.27□□□□□ -1.09
DNAAF4-CCPG1-202ENST00000568310 PPIFP30405 207 aaKnown RBP8.27□□□□□ -1.09
DNAAF4-CCPG1-202ENST00000568310 BTDP43251 543 aa8.27□□□□□ -1.09
DNAAF4-CCPG1-202ENST00000568310 IGBP1P78318 339 aa8.27□□□□□ -1.09
DNAAF4-CCPG1-202ENST00000568310 PICALMQ13492 652 aa8.27□□□□□ -1.09
DNAAF4-CCPG1-202ENST00000568310 MTX1Q13505 466 aa8.27□□□□□ -1.09
DNAAF4-CCPG1-202ENST00000568310 MVPQ14764 893 aaKnown RBP8.27□□□□□ -1.09
DNAAF4-CCPG1-202ENST00000568310 ARHGEF6Q15052 776 aa8.27□□□□□ -1.09
DNAAF4-CCPG1-202ENST00000568310 GORABQ5T7V8 394 aa8.27□□□□□ -1.09
DNAAF4-CCPG1-202ENST00000568310 ARHGAP40Q5TG30 622 aa8.27□□□□□ -1.09
DNAAF4-CCPG1-202ENST00000568310 KIAA1614Q5VZ46 1190 aa8.27□□□□□ -1.09
DNAAF4-CCPG1-202ENST00000568310 ATF7IPQ6VMQ6 1270 aa8.27□□□□□ -1.09
DNAAF4-CCPG1-202ENST00000568310 DDX4Q9NQI0 724 aaKnown RBP8.27□□□□□ -1.09
DNAAF4-CCPG1-202ENST00000568310 ZNF180Q9UJW8 692 aa8.27□□□□□ -1.09
DNAAF4-CCPG1-202ENST00000568310 SSX2IPQ9Y2D8 614 aa8.27□□□□□ -1.09
DNAAF4-CCPG1-202ENST00000568310 GAKO14976 1311 aa8.27□□□□□ -1.09
DNAAF4-CCPG1-202ENST00000568310 DDTLA6NHG4 134 aaPredicted RBP8.26□□□□□ -1.09
DNAAF4-CCPG1-202ENST00000568310 PDHXO00330 501 aa8.26□□□□□ -1.09
DNAAF4-CCPG1-202ENST00000568310 ENTPD3O75355 529 aa8.26□□□□□ -1.09
DNAAF4-CCPG1-202ENST00000568310 VIPR2P41587 438 aa8.26□□□□□ -1.09
DNAAF4-CCPG1-202ENST00000568310 RAB1AP62820 205 aa8.26□□□□□ -1.09
DNAAF4-CCPG1-202ENST00000568310 MECOMQ03112 1051 aa8.26□□□□□ -1.09
DNAAF4-CCPG1-202ENST00000568310 G3BP1Q13283 466 aaKnown RBP eCLIP8.26□□□□□ -1.09
DNAAF4-CCPG1-202ENST00000568310 FGL2Q14314 439 aa8.26□□□□□ -1.09
DNAAF4-CCPG1-202ENST00000568310 SLC9C1Q4G0N8 1177 aa8.26□□□□□ -1.09
DNAAF4-CCPG1-202ENST00000568310 TREML2Q5T2D2 321 aa8.26□□□□□ -1.09
DNAAF4-CCPG1-202ENST00000568310 CEP85Q6P2H3 762 aa8.26□□□□□ -1.09
DNAAF4-CCPG1-202ENST00000568310 ANKRD16Q6P6B7 361 aa8.26□□□□□ -1.09
DNAAF4-CCPG1-202ENST00000568310 ANKRD23Q86SG2 305 aa8.26□□□□□ -1.09
DNAAF4-CCPG1-202ENST00000568310 FAM177A1Q8N128 213 aaPredicted RBP8.26□□□□□ -1.09
DNAAF4-CCPG1-202ENST00000568310 TMEM57Q8N5G2 664 aa8.26□□□□□ -1.09
DNAAF4-CCPG1-202ENST00000568310 SEMA6DQ8NFY4 1073 aa8.26□□□□□ -1.09
DNAAF4-CCPG1-202ENST00000568310 JPH3Q8WXH2 748 aaPredicted RBP8.26□□□□□ -1.09
DNAAF4-CCPG1-202ENST00000568310 AIFM3Q96NN9 605 aa8.26□□□□□ -1.09
DNAAF4-CCPG1-202ENST00000568310 IDI2Q9BXS1 227 aa8.26□□□□□ -1.09
DNAAF4-CCPG1-202ENST00000568310 ZCCHC17Q9NP64 241 aaKnown RBP8.26□□□□□ -1.09
DNAAF4-CCPG1-202ENST00000568310 HMG20BQ9P0W2 317 aa8.26□□□□□ -1.09
DNAAF4-CCPG1-202ENST00000568310 XPR1Q9UBH6 696 aa8.26□□□□□ -1.09
DNAAF4-CCPG1-202ENST00000568310 MED16Q9Y2X0 877 aa8.26□□□□□ -1.09
DNAAF4-CCPG1-202ENST00000568310 ZSWIM8A7E2V4 1837 aa8.26□□□□□ -1.09
DNAAF4-CCPG1-202ENST00000568310 MROH7-TTC4A0A0A0MT08 1334 aa8.26□□□□□ -1.09
DNAAF4-CCPG1-202ENST00000568310 MYH2Q9UKX2 1941 aa8.25□□□□□ -1.09
DNAAF4-CCPG1-202ENST00000568310 DNAJC9-AS1A6NH13 148 aa8.25□□□□□ -1.09
DNAAF4-CCPG1-202ENST00000568310 AKAP10O43572 662 aa8.25□□□□□ -1.09
DNAAF4-CCPG1-202ENST00000568310 ONECUT2O95948 504 aa8.25□□□□□ -1.09
DNAAF4-CCPG1-202ENST00000568310 IL6RP08887 468 aaPredicted RBP8.25□□□□□ -1.09
DNAAF4-CCPG1-202ENST00000568310 CTGFP29279 349 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms