RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 FYB2Q5VWT5 728 aa7.21□□□□□ -1.26
SF3B3-209ENST00000567635 BEND5Q7L4P6 421 aa7.21□□□□□ -1.26
SF3B3-209ENST00000567635 LPCAT2Q7L5N7 544 aa7.21□□□□□ -1.26
SF3B3-209ENST00000567635 TMEM110Q86TL2 294 aa7.21□□□□□ -1.26
SF3B3-209ENST00000567635 C12orf50Q8NA57 414 aaPredicted RBP7.21□□□□□ -1.26
SF3B3-209ENST00000567635 CLEC4CQ8WTT0 213 aa7.21□□□□□ -1.26
SF3B3-209ENST00000567635 UCMAQ8WVF2 138 aa7.21□□□□□ -1.26
SF3B3-209ENST00000567635 RLN3Q8WXF3 142 aa7.21□□□□□ -1.26
SF3B3-209ENST00000567635 AZIN2Q96A70 460 aa7.21□□□□□ -1.26
SF3B3-209ENST00000567635 P2RY11Q96G91 374 aa7.21□□□□□ -1.26
SF3B3-209ENST00000567635 GBP4Q96PP9 640 aa7.21□□□□□ -1.26
SF3B3-209ENST00000567635 ACOX2Q99424 681 aa7.21□□□□□ -1.26
SF3B3-209ENST00000567635 TUBGCP2Q9BSJ2 902 aa7.21□□□□□ -1.26
SF3B3-209ENST00000567635 RTKNQ9BST9 563 aa7.21□□□□□ -1.26
SF3B3-209ENST00000567635 TRIM62Q9BVG3 475 aa7.21□□□□□ -1.26
SF3B3-209ENST00000567635 IRX2Q9BZI1 471 aaPredicted RBP7.21□□□□□ -1.26
SF3B3-209ENST00000567635 NDST4Q9H3R1 872 aa7.21□□□□□ -1.26
SF3B3-209ENST00000567635 ST7Q9NRC1 585 aa7.21□□□□□ -1.26
SF3B3-209ENST00000567635 VPS45Q9NRW7 570 aa7.21□□□□□ -1.26
SF3B3-209ENST00000567635 ELOVL2Q9NXB9 296 aa7.21□□□□□ -1.26
SF3B3-209ENST00000567635 APEX2Q9UBZ4 518 aa7.21□□□□□ -1.26
SF3B3-209ENST00000567635 STOML2Q9UJZ1 356 aa7.21□□□□□ -1.26
SF3B3-209ENST00000567635 DMDP11532 3685 aa7.21□□□□□ -1.26
SF3B3-209ENST00000567635 DOCK9Q9BZ29 2069 aa7.2□□□□□ -1.26
SF3B3-209ENST00000567635 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.2□□□□□ -1.26
SF3B3-209ENST00000567635 A0A1W2PQF6 199 aa7.2□□□□□ -1.26
SF3B3-209ENST00000567635 BECN2A8MW95 431 aa7.2□□□□□ -1.26
SF3B3-209ENST00000567635 KCNJ18B7U540 433 aa7.2□□□□□ -1.26
SF3B3-209ENST00000567635 WASH3PC4AMC7 463 aa7.2□□□□□ -1.26
SF3B3-209ENST00000567635 PES1O00541 588 aaKnown RBP7.2□□□□□ -1.26
SF3B3-209ENST00000567635 CAPN9O14815 690 aa7.2□□□□□ -1.26
SF3B3-209ENST00000567635 IRAK2O43187 625 aa7.2□□□□□ -1.26
SF3B3-209ENST00000567635 GDF9O60383 454 aa7.2□□□□□ -1.26
SF3B3-209ENST00000567635 IGLV3-27P01718 113 aa7.2□□□□□ -1.26
SF3B3-209ENST00000567635 FYNP06241 537 aa7.2□□□□□ -1.26
SF3B3-209ENST00000567635 GABRG2P18507 467 aa7.2□□□□□ -1.26
SF3B3-209ENST00000567635 BCKDHBP21953 392 aa7.2□□□□□ -1.26
SF3B3-209ENST00000567635 KRT9P35527 623 aa7.2□□□□□ -1.26
SF3B3-209ENST00000567635 MPLP40238 635 aa7.2□□□□□ -1.26
SF3B3-209ENST00000567635 SLC11A2P49281 568 aa7.2□□□□□ -1.26
SF3B3-209ENST00000567635 TBX4P57082 545 aa7.2□□□□□ -1.26
SF3B3-209ENST00000567635 SNX16P57768 344 aa7.2□□□□□ -1.26
SF3B3-209ENST00000567635 BPIFB4P59827 614 aa7.2□□□□□ -1.26
SF3B3-209ENST00000567635 YWHAZP63104 245 aaKnown RBP7.2□□□□□ -1.26
SF3B3-209ENST00000567635 KCNJ12Q14500 433 aa7.2□□□□□ -1.26
SF3B3-209ENST00000567635 SF3A2Q15428 464 aaKnown RBP7.2□□□□□ -1.26
SF3B3-209ENST00000567635 GEN1Q17RS7 908 aa7.2□□□□□ -1.26
SF3B3-209ENST00000567635 MAP7D1Q3KQU3 841 aa7.2□□□□□ -1.26
SF3B3-209ENST00000567635 AASDHQ4L235 1098 aaPredicted RBP7.2□□□□□ -1.26
SF3B3-209ENST00000567635 HSP90AA4PQ58FG1 418 aa7.2□□□□□ -1.26
SF3B3-209ENST00000567635 MIIPQ5JXC2 388 aa7.2□□□□□ -1.26
SF3B3-209ENST00000567635 SPDYCQ5MJ68 293 aa7.2□□□□□ -1.26
SF3B3-209ENST00000567635 MPP7Q5T2T1 576 aa7.2□□□□□ -1.26
SF3B3-209ENST00000567635 SYPL2Q5VXT5 272 aa7.2□□□□□ -1.26
SF3B3-209ENST00000567635 NUGGCQ68CJ6 796 aa7.2□□□□□ -1.26
SF3B3-209ENST00000567635 PMS2CLQ68D20 193 aa7.2□□□□□ -1.26
SF3B3-209ENST00000567635 SLC36A4Q6YBV0 504 aa7.2□□□□□ -1.26
SF3B3-209ENST00000567635 NETO1Q8TDF5 533 aa7.2□□□□□ -1.26
SF3B3-209ENST00000567635 IPO4Q8TEX9 1081 aaKnown RBP7.2□□□□□ -1.26
SF3B3-209ENST00000567635 SHC3Q92529 594 aa7.2□□□□□ -1.26
SF3B3-209ENST00000567635 FAM149B1Q96BN6 582 aa7.2□□□□□ -1.26
SF3B3-209ENST00000567635 SPACA7Q96KW9 195 aa7.2□□□□□ -1.26
SF3B3-209ENST00000567635 GABRG3Q99928 467 aa7.2□□□□□ -1.26
SF3B3-209ENST00000567635 DDX50Q9BQ39 737 aaKnown RBP7.2□□□□□ -1.26
SF3B3-209ENST00000567635 LHX5Q9H2C1 402 aa7.2□□□□□ -1.26
SF3B3-209ENST00000567635 SIX2Q9NPC8 291 aa7.2□□□□□ -1.26
SF3B3-209ENST00000567635 ACP6Q9NPH0 428 aa7.2□□□□□ -1.26
SF3B3-209ENST00000567635 SAMSN1Q9NSI8 373 aaKnown RBP7.2□□□□□ -1.26
SF3B3-209ENST00000567635 CACNA2D2Q9NY47 1150 aa7.2□□□□□ -1.26
SF3B3-209ENST00000567635 THAP10Q9P2Z0 257 aaPredicted RBP7.2□□□□□ -1.26
SF3B3-209ENST00000567635 CYTH4Q9UIA0 394 aa7.2□□□□□ -1.26
SF3B3-209ENST00000567635 MBD1Q9UIS9 605 aaPredicted RBP7.2□□□□□ -1.26
SF3B3-209ENST00000567635 DNAJC12Q9UKB3 198 aa7.2□□□□□ -1.26
SF3B3-209ENST00000567635 CLEC4EQ9ULY5 219 aa7.2□□□□□ -1.26
SF3B3-209ENST00000567635 PCDHGC3Q9UN70 934 aa7.2□□□□□ -1.26
SF3B3-209ENST00000567635 PLA2G4CQ9UP65 541 aa7.2□□□□□ -1.26
SF3B3-209ENST00000567635 NAALADL1Q9UQQ1 740 aa7.2□□□□□ -1.26
SF3B3-209ENST00000567635 TLR6Q9Y2C9 796 aa7.2□□□□□ -1.26
SF3B3-209ENST00000567635 STON1Q9Y6Q2 735 aa7.2□□□□□ -1.26
SF3B3-209ENST00000567635 NCOR2Q9Y618 2525 aa7.19□□□□□ -1.26
SF3B3-209ENST00000567635 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.19□□□□□ -1.26
SF3B3-209ENST00000567635 GOLGA6L7A0A1B0GV03 622 aa7.19□□□□□ -1.26
SF3B3-209ENST00000567635 DCDC2BA2VCK2 349 aa7.19□□□□□ -1.26
SF3B3-209ENST00000567635 E5RJQ4 531 aa7.19□□□□□ -1.26
SF3B3-209ENST00000567635 GOLGA6L22H0YM25 854 aa7.19□□□□□ -1.26
SF3B3-209ENST00000567635 SLC30A4O14863 429 aa7.19□□□□□ -1.26
SF3B3-209ENST00000567635 PAPSS1O43252 624 aaPredicted RBP7.19□□□□□ -1.26
SF3B3-209ENST00000567635 ACSL4O60488 711 aa7.19□□□□□ -1.26
SF3B3-209ENST00000567635 TBL1XO60907 577 aa7.19□□□□□ -1.26
SF3B3-209ENST00000567635 ZNF217O75362 1048 aa7.19□□□□□ -1.26
SF3B3-209ENST00000567635 EEF1GP26641 437 aaKnown RBP7.19□□□□□ -1.26
SF3B3-209ENST00000567635 HOXD9P28356 352 aaPredicted RBP7.19□□□□□ -1.26
SF3B3-209ENST00000567635 CLCN1P35523 988 aa7.19□□□□□ -1.26
SF3B3-209ENST00000567635 DHPSP49366 369 aaPredicted RBP7.19□□□□□ -1.26
SF3B3-209ENST00000567635 LIMK1P53667 647 aa7.19□□□□□ -1.26
SF3B3-209ENST00000567635 ARID5AQ03989 594 aa7.19□□□□□ -1.26
SF3B3-209ENST00000567635 NNTQ13423 1086 aa7.19□□□□□ -1.26
SF3B3-209ENST00000567635 ENPP2Q13822 863 aa7.19□□□□□ -1.26
SF3B3-209ENST00000567635 DRAP1Q14919 205 aaPredicted RBP7.19□□□□□ -1.26
SF3B3-209ENST00000567635 EIF4HQ15056 248 aaKnown RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms