RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 TBC1D31Q96DN5 1066 aa18.33■□□□□ 0.52
CMTM3-214ENST00000567572 GAD1Q99259 594 aa18.33■□□□□ 0.52
CMTM3-214ENST00000567572 LPIN3Q9BQK8 851 aa18.33■□□□□ 0.52
CMTM3-214ENST00000567572 IQCGQ9H095 443 aaKnown RBP18.33■□□□□ 0.52
CMTM3-214ENST00000567572 NRDE2Q9H7Z3 1164 aa18.33■□□□□ 0.52
CMTM3-214ENST00000567572 NPHS2Q9NP85 383 aa18.33■□□□□ 0.52
CMTM3-214ENST00000567572 TRMT13Q9NUP7 481 aaKnown RBP18.33■□□□□ 0.52
CMTM3-214ENST00000567572 GEMIN8Q9NWZ8 242 aaKnown RBP18.33■□□□□ 0.52
CMTM3-214ENST00000567572 SLC17A7Q9P2U7 560 aa18.33■□□□□ 0.52
CMTM3-214ENST00000567572 STK38LQ9Y2H1 464 aa18.33■□□□□ 0.52
CMTM3-214ENST00000567572 C15orf41Q9Y2V0 281 aa18.33■□□□□ 0.52
CMTM3-214ENST00000567572 CNTFP26441 200 aa18.32■□□□□ 0.52
CMTM3-214ENST00000567572 RGS7P49802 495 aa18.32■□□□□ 0.52
CMTM3-214ENST00000567572 SERPINB9P50453 376 aa18.32■□□□□ 0.52
CMTM3-214ENST00000567572 BCAT1P54687 386 aa18.32■□□□□ 0.52
CMTM3-214ENST00000567572 HDAC4P56524 1084 aa18.32■□□□□ 0.52
CMTM3-214ENST00000567572 CDK16Q00536 496 aa18.32■□□□□ 0.52
CMTM3-214ENST00000567572 BST2Q10589 180 aaKnown RBP18.32■□□□□ 0.52
CMTM3-214ENST00000567572 DSC3Q14574 896 aa18.32■□□□□ 0.52
CMTM3-214ENST00000567572 LPIN1Q14693 890 aa18.32■□□□□ 0.52
CMTM3-214ENST00000567572 PRKD1Q15139 912 aaPredicted RBP18.32■□□□□ 0.52
CMTM3-214ENST00000567572 SCYL2Q6P3W7 929 aa18.32■□□□□ 0.52
CMTM3-214ENST00000567572 TLDC1Q6P9B6 456 aa18.32■□□□□ 0.52
CMTM3-214ENST00000567572 AGMOQ6ZNB7 445 aa18.32■□□□□ 0.52
CMTM3-214ENST00000567572 BZW1Q7L1Q6 419 aaKnown RBP18.32■□□□□ 0.52
CMTM3-214ENST00000567572 CLNKQ7Z7G1 428 aa18.32■□□□□ 0.52
CMTM3-214ENST00000567572 RAET1EQ8TD07 263 aa18.32■□□□□ 0.52
CMTM3-214ENST00000567572 LPPQ93052 612 aa18.32■□□□□ 0.52
CMTM3-214ENST00000567572 RSRC1Q96IZ7 334 aaKnown RBP18.32■□□□□ 0.52
CMTM3-214ENST00000567572 SERAC1Q96JX3 654 aa18.32■□□□□ 0.52
CMTM3-214ENST00000567572 QKIQ96PU8 341 aaKnown RBP eCLIP18.32■□□□□ 0.52
CMTM3-214ENST00000567572 TSPYL2Q9H2G4 693 aaPredicted RBP18.32■□□□□ 0.52
CMTM3-214ENST00000567572 GIT1Q9Y2X7 761 aa18.32■□□□□ 0.52
CMTM3-214ENST00000567572 ARL5CA6NH57 179 aa18.31■□□□□ 0.52
CMTM3-214ENST00000567572 HACD1B0YJ81 288 aa18.31■□□□□ 0.52
CMTM3-214ENST00000567572 COPEO14579 308 aa18.31■□□□□ 0.52
CMTM3-214ENST00000567572 MGEA5O60502 916 aa18.31■□□□□ 0.52
CMTM3-214ENST00000567572 ZNF623O75123 536 aa18.31■□□□□ 0.52
CMTM3-214ENST00000567572 GABBR2O75899 941 aa18.31■□□□□ 0.52
CMTM3-214ENST00000567572 KRT38O76015 456 aa18.31■□□□□ 0.52
CMTM3-214ENST00000567572 GNRH1P01148 92 aa18.31■□□□□ 0.52
CMTM3-214ENST00000567572 APOEP02649 317 aa18.31■□□□□ 0.52
CMTM3-214ENST00000567572 ATP5BP06576 529 aaKnown RBP18.31■□□□□ 0.52
CMTM3-214ENST00000567572 PDGFRBP09619 1106 aa18.31■□□□□ 0.52
CMTM3-214ENST00000567572 FAM163BP0C2L3 166 aa18.31■□□□□ 0.52
CMTM3-214ENST00000567572 CCDC130P13994 396 aa18.31■□□□□ 0.52
CMTM3-214ENST00000567572 CYP2F1P24903 491 aa18.31■□□□□ 0.52
CMTM3-214ENST00000567572 TARSP26639 723 aaKnown RBP18.31■□□□□ 0.52
CMTM3-214ENST00000567572 PTPN4P29074 926 aa18.31■□□□□ 0.52
CMTM3-214ENST00000567572 RAB27AP51159 221 aa18.31■□□□□ 0.52
CMTM3-214ENST00000567572 AFF1P51825 1210 aaKnown RBP18.31■□□□□ 0.52
CMTM3-214ENST00000567572 WASHC2DQ5SRD0 308 aa18.31■□□□□ 0.52
CMTM3-214ENST00000567572 CAND1Q86VP6 1230 aaKnown RBP18.31■□□□□ 0.52
CMTM3-214ENST00000567572 OSTM1Q86WC4 334 aa18.31■□□□□ 0.52
CMTM3-214ENST00000567572 ANKRD52Q8NB46 1076 aa18.31■□□□□ 0.52
CMTM3-214ENST00000567572 UTP4Q969X6 686 aaKnown RBP18.31■□□□□ 0.52
CMTM3-214ENST00000567572 SLC7A6OSQ96CW6 309 aaPredicted RBP18.31■□□□□ 0.52
CMTM3-214ENST00000567572 TRIM33Q9UPN9 1127 aa18.31■□□□□ 0.52
CMTM3-214ENST00000567572 HEY1Q9Y5J3 304 aa18.31■□□□□ 0.52
CMTM3-214ENST00000567572 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.31■□□□□ 0.52
CMTM3-214ENST00000567572 PIK3R2O00459 728 aa18.31■□□□□ 0.52
CMTM3-214ENST00000567572 THP07101 528 aa18.31■□□□□ 0.52
CMTM3-214ENST00000567572 T-ENOLP0DO92 83 aa18.31■□□□□ 0.52
CMTM3-214ENST00000567572 ELF1P32519 619 aa18.31■□□□□ 0.52
CMTM3-214ENST00000567572 SERPINB4P48594 390 aa18.31■□□□□ 0.52
CMTM3-214ENST00000567572 SARNPP82979 210 aaKnown RBP18.31■□□□□ 0.52
CMTM3-214ENST00000567572 STRADAQ7RTN6 431 aa18.31■□□□□ 0.52
CMTM3-214ENST00000567572 TAB3Q8N5C8 712 aaPredicted RBP18.31■□□□□ 0.52
CMTM3-214ENST00000567572 GSDMBQ8TAX9 411 aa18.31■□□□□ 0.52
CMTM3-214ENST00000567572 TNIP3Q96KP6 325 aa18.31■□□□□ 0.52
CMTM3-214ENST00000567572 HSFY1Q96LI6 401 aa18.31■□□□□ 0.52
CMTM3-214ENST00000567572 MIOSQ9NXC5 875 aa18.31■□□□□ 0.52
CMTM3-214ENST00000567572 MOXD2PA6NHM9 499 aa18.3■□□□□ 0.52
CMTM3-214ENST00000567572 GRAP2O75791 330 aa18.3■□□□□ 0.52
CMTM3-214ENST00000567572 ANP32DO95626 131 aa18.3■□□□□ 0.52
CMTM3-214ENST00000567572 APRTP07741 180 aa18.3■□□□□ 0.52
CMTM3-214ENST00000567572 MLNP12872 115 aa18.3■□□□□ 0.52
CMTM3-214ENST00000567572 IGFBP6P24592 240 aaPredicted RBP18.3■□□□□ 0.52
CMTM3-214ENST00000567572 L1CAMP32004 1257 aa18.3■□□□□ 0.52
CMTM3-214ENST00000567572 APLP1P51693 650 aa18.3■□□□□ 0.52
CMTM3-214ENST00000567572 SEMA5AQ13591 1074 aa18.3■□□□□ 0.52
CMTM3-214ENST00000567572 CTC1Q2NKJ3 1217 aa18.3■□□□□ 0.52
CMTM3-214ENST00000567572 TAF1BQ53T94 588 aaPredicted RBP18.3■□□□□ 0.52
CMTM3-214ENST00000567572 STAMBPL1Q96FJ0 436 aa18.3■□□□□ 0.52
CMTM3-214ENST00000567572 CFAP36Q96G28 342 aa18.3■□□□□ 0.52
CMTM3-214ENST00000567572 C7orf26Q96N11 449 aa18.3■□□□□ 0.52
CMTM3-214ENST00000567572 HAO1Q9UJM8 370 aa18.3■□□□□ 0.52
CMTM3-214ENST00000567572 NOD1Q9Y239 953 aa18.3■□□□□ 0.52
CMTM3-214ENST00000567572 FAM159BA6NKW6 160 aa18.29■□□□□ 0.52
CMTM3-214ENST00000567572 TRIM49D1C9J1S8 452 aa18.29■□□□□ 0.52
CMTM3-214ENST00000567572 GOLGA8RI6L899 631 aa18.29■□□□□ 0.52
CMTM3-214ENST00000567572 CYB561D2O14569 222 aa18.29■□□□□ 0.52
CMTM3-214ENST00000567572 GABRDO14764 452 aa18.29■□□□□ 0.52
CMTM3-214ENST00000567572 HAUS5O94927 633 aa18.29■□□□□ 0.52
CMTM3-214ENST00000567572 PYGBP11216 843 aa18.29■□□□□ 0.52
CMTM3-214ENST00000567572 ARFIP2P53365 341 aa18.29■□□□□ 0.52
CMTM3-214ENST00000567572 KRT72Q14CN4 511 aa18.29■□□□□ 0.52
CMTM3-214ENST00000567572 RAB6CQ53S08 254 aa18.29■□□□□ 0.52
CMTM3-214ENST00000567572 FAM111AQ96PZ2 611 aa18.29■□□□□ 0.52
CMTM3-214ENST00000567572 SRPK1Q96SB4 655 aaKnown RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms