RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 KHSRPQ92945 711 aaKnown RBP eCLIP17.32■□□□□ 0.36
CMTM3-213ENST00000566756 PIWIL1Q96J94 861 aaKnown RBP17.32■□□□□ 0.36
CMTM3-213ENST00000566756 SIGLEC10Q96LC7 697 aa17.32■□□□□ 0.36
CMTM3-213ENST00000566756 WWP1Q9H0M0 922 aa17.32■□□□□ 0.36
CMTM3-213ENST00000566756 NGRNQ9NPE2 291 aaKnown RBP17.32■□□□□ 0.36
CMTM3-213ENST00000566756 HEY1Q9Y5J3 304 aa17.32■□□□□ 0.36
CMTM3-213ENST00000566756 MYADML2A6NDP7 307 aa17.31■□□□□ 0.36
CMTM3-213ENST00000566756 CXorf49A8MYA2 514 aaPredicted RBP17.31■□□□□ 0.36
CMTM3-213ENST00000566756 MAGEC1O60732 1142 aa17.31■□□□□ 0.36
CMTM3-213ENST00000566756 APRTP07741 180 aa17.31■□□□□ 0.36
CMTM3-213ENST00000566756 MLNP12872 115 aa17.31■□□□□ 0.36
CMTM3-213ENST00000566756 RAP1GDS1P52306 607 aa17.31■□□□□ 0.36
CMTM3-213ENST00000566756 MRPS5P82675 430 aaKnown RBP17.31■□□□□ 0.36
CMTM3-213ENST00000566756 CACNB2Q08289 660 aaPredicted RBP17.31■□□□□ 0.36
CMTM3-213ENST00000566756 CDO1Q16878 200 aa17.31■□□□□ 0.36
CMTM3-213ENST00000566756 TAF2Q6P1X5 1199 aa17.31■□□□□ 0.36
CMTM3-213ENST00000566756 UNC5AQ6ZN44 842 aa17.31■□□□□ 0.36
CMTM3-213ENST00000566756 CDHR3Q6ZTQ4 885 aa17.31■□□□□ 0.36
CMTM3-213ENST00000566756 LMNTD2Q8IXW0 634 aa17.31■□□□□ 0.36
CMTM3-213ENST00000566756 TTC8Q8TAM2 541 aa17.31■□□□□ 0.36
CMTM3-213ENST00000566756 KCNV2Q8TDN2 545 aa17.31■□□□□ 0.36
CMTM3-213ENST00000566756 CENPIQ92674 756 aaPredicted RBP17.31■□□□□ 0.36
CMTM3-213ENST00000566756 MCUR1Q96AQ8 359 aa17.31■□□□□ 0.36
CMTM3-213ENST00000566756 C11orf84Q9BUA3 381 aaPredicted RBP17.31■□□□□ 0.36
CMTM3-213ENST00000566756 TRIM6Q9C030 488 aaPredicted RBP17.31■□□□□ 0.36
CMTM3-213ENST00000566756 PLEKHA5Q9HAU0 1116 aa17.31■□□□□ 0.36
CMTM3-213ENST00000566756 CDHR5Q9HBB8 845 aa17.31■□□□□ 0.36
CMTM3-213ENST00000566756 FBXO6Q9NRD1 293 aaPredicted RBP17.31■□□□□ 0.36
CMTM3-213ENST00000566756 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.31■□□□□ 0.36
CMTM3-213ENST00000566756 TAS2R1Q9NYW7 299 aa17.31■□□□□ 0.36
CMTM3-213ENST00000566756 PCDHA11Q9Y5I1 949 aa17.31■□□□□ 0.36
CMTM3-213ENST00000566756 CAPN14A8MX76 684 aa17.31■□□□□ 0.36
CMTM3-213ENST00000566756 SNNO75324 88 aaPredicted RBP17.31■□□□□ 0.36
CMTM3-213ENST00000566756 VHLP40337 213 aa17.31■□□□□ 0.36
CMTM3-213ENST00000566756 SEMA5AQ13591 1074 aa17.31■□□□□ 0.36
CMTM3-213ENST00000566756 TEX44Q53QW1 395 aa17.31■□□□□ 0.36
CMTM3-213ENST00000566756 RAB6CQ53S08 254 aa17.31■□□□□ 0.36
CMTM3-213ENST00000566756 ARHGAP17Q68EM7 881 aa17.31■□□□□ 0.36
CMTM3-213ENST00000566756 PMF1Q6P1K2 205 aa17.31■□□□□ 0.36
CMTM3-213ENST00000566756 SCYL2Q6P3W7 929 aa17.31■□□□□ 0.36
CMTM3-213ENST00000566756 SLC27A1Q6PCB7 646 aa17.31■□□□□ 0.36
CMTM3-213ENST00000566756 ZNF534Q76KX8 674 aa17.31■□□□□ 0.36
CMTM3-213ENST00000566756 CATSPER4Q7RTX7 472 aa17.31■□□□□ 0.36
CMTM3-213ENST00000566756 UNC93AQ86WB7 457 aa17.31■□□□□ 0.36
CMTM3-213ENST00000566756 ACMSDQ8TDX5 336 aa17.31■□□□□ 0.36
CMTM3-213ENST00000566756 QKIQ96PU8 341 aaKnown RBP eCLIP17.31■□□□□ 0.36
CMTM3-213ENST00000566756 RAB6CQ9H0N0 254 aa17.31■□□□□ 0.36
CMTM3-213ENST00000566756 SORCS3Q9UPU3 1222 aa17.31■□□□□ 0.36
CMTM3-213ENST00000566756 A6NHS1 94 aa17.3■□□□□ 0.36
CMTM3-213ENST00000566756 F8W8V4 182 aa17.3■□□□□ 0.36
CMTM3-213ENST00000566756 CYP2F1P24903 491 aa17.3■□□□□ 0.36
CMTM3-213ENST00000566756 HOXD10P28358 340 aa17.3■□□□□ 0.36
CMTM3-213ENST00000566756 CRYBB1P53674 252 aaPredicted RBP17.3■□□□□ 0.36
CMTM3-213ENST00000566756 HDAC4P56524 1084 aa17.3■□□□□ 0.36
CMTM3-213ENST00000566756 SARNPP82979 210 aaKnown RBP17.3■□□□□ 0.36
CMTM3-213ENST00000566756 CAP1Q01518 475 aa17.3■□□□□ 0.36
CMTM3-213ENST00000566756 TMEM62Q0P6H9 643 aa17.3■□□□□ 0.36
CMTM3-213ENST00000566756 BST1Q10588 318 aa17.3■□□□□ 0.36
CMTM3-213ENST00000566756 NAB1Q13506 487 aa17.3■□□□□ 0.36
CMTM3-213ENST00000566756 KHDC1Q4VXA5 237 aaKnown RBP17.3■□□□□ 0.36
CMTM3-213ENST00000566756 PPP1R26Q5T8A7 1209 aaPredicted RBP17.3■□□□□ 0.36
CMTM3-213ENST00000566756 STEAP4Q687X5 459 aa17.3■□□□□ 0.36
CMTM3-213ENST00000566756 NOTUMQ6P988 496 aa17.3■□□□□ 0.36
CMTM3-213ENST00000566756 KYAT3Q6YP21 454 aaKnown RBP17.3■□□□□ 0.36
CMTM3-213ENST00000566756 TTC30AQ86WT1 665 aa17.3■□□□□ 0.36
CMTM3-213ENST00000566756 TMPRSS6Q8IU80 811 aa17.3■□□□□ 0.36
CMTM3-213ENST00000566756 HACE1Q8IYU2 909 aa17.3■□□□□ 0.36
CMTM3-213ENST00000566756 OSMRQ99650 979 aa17.3■□□□□ 0.36
CMTM3-213ENST00000566756 DNAI2Q9GZS0 605 aa17.3■□□□□ 0.36
CMTM3-213ENST00000566756 SMYD2Q9NRG4 433 aa17.3■□□□□ 0.36
CMTM3-213ENST00000566756 RNF186Q9NXI6 227 aa17.3■□□□□ 0.36
CMTM3-213ENST00000566756 HESX1Q9UBX0 185 aa17.3■□□□□ 0.36
CMTM3-213ENST00000566756 PDCD11Q14690 1871 aaKnown RBP17.3■□□□□ 0.36
CMTM3-213ENST00000566756 HACD1B0YJ81 288 aa17.29■□□□□ 0.36
CMTM3-213ENST00000566756 ADAMTS4O75173 837 aa17.29■□□□□ 0.36
CMTM3-213ENST00000566756 ALDH1A2O94788 518 aa17.29■□□□□ 0.36
CMTM3-213ENST00000566756 L1CAMP32004 1257 aa17.29■□□□□ 0.36
CMTM3-213ENST00000566756 RPL34P49207 117 aaKnown RBP17.29■□□□□ 0.36
CMTM3-213ENST00000566756 APLP1P51693 650 aa17.29■□□□□ 0.36
CMTM3-213ENST00000566756 MRPS35P82673 323 aaKnown RBP17.29■□□□□ 0.36
CMTM3-213ENST00000566756 TMPRSS15P98073 1019 aa17.29■□□□□ 0.36
CMTM3-213ENST00000566756 SNX17Q15036 470 aa17.29■□□□□ 0.36
CMTM3-213ENST00000566756 RFWD3Q6PCD5 774 aa17.29■□□□□ 0.36
CMTM3-213ENST00000566756 DSTYKQ6XUX3 929 aa17.29■□□□□ 0.36
CMTM3-213ENST00000566756 RINLQ6ZS11 566 aa17.29■□□□□ 0.36
CMTM3-213ENST00000566756 DPH6Q7L8W6 267 aa17.29■□□□□ 0.36
CMTM3-213ENST00000566756 SLC26A9Q7LBE3 791 aa17.29■□□□□ 0.36
CMTM3-213ENST00000566756 CRLF3Q8IUI8 442 aa17.29■□□□□ 0.36
CMTM3-213ENST00000566756 CCNJLQ8IV13 435 aa17.29■□□□□ 0.36
CMTM3-213ENST00000566756 NUDCD3Q8IVD9 361 aa17.29■□□□□ 0.36
CMTM3-213ENST00000566756 LRRC52Q8N7C0 313 aa17.29■□□□□ 0.36
CMTM3-213ENST00000566756 DNAJC9Q8WXX5 260 aa17.29■□□□□ 0.36
CMTM3-213ENST00000566756 STN1Q9H668 368 aaKnown RBP17.29■□□□□ 0.36
CMTM3-213ENST00000566756 MOCS1Q9NZB8 636 aa17.29■□□□□ 0.36
CMTM3-213ENST00000566756 FAM237BA0A1B0GVD1 139 aa17.29■□□□□ 0.36
CMTM3-213ENST00000566756 PAPSS1O43252 624 aaPredicted RBP17.29■□□□□ 0.36
CMTM3-213ENST00000566756 GRAP2O75791 330 aa17.29■□□□□ 0.36
CMTM3-213ENST00000566756 RPLP2P05387 115 aaKnown RBP17.29■□□□□ 0.36
CMTM3-213ENST00000566756 BPGMP07738 259 aa17.29■□□□□ 0.36
CMTM3-213ENST00000566756 CST5P28325 142 aaPredicted RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms