RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 CROTQ9UKG9 612 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 PLA2G2DQ9UNK4 145 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 RABL2BQ9UNT1 228 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 USP22Q9UPT9 525 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 RCE1Q9Y256 329 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 KNSTRNQ9Y448 316 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 PCDHB7Q9Y5E2 793 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 PASKQ96RG2 1323 aa3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 BAZ1AQ9NRL2 1556 aaPredicted RBP3.58□□□□□ -1.84
HERPUD1-211ENST00000566550 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 FAM237BA0A1B0GVD1 139 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 ARHGAP10A1A4S6 786 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 URADA6NGE7 173 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 LIPT2A6NK58 231 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 SAC3D1A6NKF1 404 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 TRIM64CA6NLI5 447 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 SLC38A8A6NNN8 435 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 H0YAE9 185 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 SNAP23O00161 211 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 TGFB1I1O43294 461 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 TNFSF14O43557 240 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 TULP3O75386 442 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 TOX4O94842 621 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 HEXIM1O94992 359 aaKnown RBP3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 FTCDO95954 541 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 HMGCRP04035 888 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 C6P13671 934 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 GRK5P34947 590 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 THBS4P35443 961 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 MSX2P35548 267 aaPredicted RBP3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 BSGP35613 385 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 VIPR2P41587 438 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 ZNF41P51814 821 aaPredicted RBP3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 MRPL12P52815 198 aaKnown RBP3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 WNT3P56703 355 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 GOLGA8DPQ0D2H9 430 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 PTP4A2Q12974 167 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 IQCB1Q15051 598 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 ADIPOQQ15848 244 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 VMACQ2NL98 169 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 PRICKLE4Q2TBC4 344 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 PTCHD3Q3KNS1 767 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 ZIK1Q3SY52 487 aaPredicted RBP3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 PLEKHN1Q494U1 663 aaPredicted RBP3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 UBAP2Q5T6F2 1119 aaKnown RBP3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 ERMARDQ5T6L9 678 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 ATRNL1Q5VV63 1379 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 RAB12Q6IQ22 244 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 CAVIN1Q6NZI2 390 aaKnown RBP3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 KLHL35Q6PF15 583 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 PET117Q6UWS5 81 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 RPTNQ6XPR3 784 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 SLC30A10Q6XR72 485 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 FAM83HQ6ZRV2 1179 aaPredicted RBP3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 KRT27Q7Z3Y8 459 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 CLEC14AQ86T13 490 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 TRABD2AQ86V40 505 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 GAS2L3Q86XJ1 694 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 PDSS2Q86YH6 399 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 TMEFF1Q8IYR6 380 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 ULK2Q8IYT8 1036 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 SPARTQ8N0X7 666 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 FSTL5Q8N475 847 aaPredicted RBP3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 LINC01356Q8N9X3 169 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 POMGNT2Q8NAT1 580 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 PLA2G15Q8NCC3 412 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 PDPRQ8NCN5 879 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 LSM14AQ8ND56 463 aaKnown RBP3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 SLC35B2Q8TB61 432 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 TBC1D15Q8TC07 691 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 UTP15Q8TED0 518 aaKnown RBP3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 ABHD5Q8WTS1 349 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 TMEM171Q8WVE6 324 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 MRPS27Q92552 414 aaKnown RBP3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 KRT35Q92764 455 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 SCAMP4Q969E2 229 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 PPP2R3CQ969Q6 453 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 SAAL1Q96ER3 474 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 PGAP3Q96FM1 320 aaPredicted RBP3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 TSPAN17Q96FV3 270 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 REXO5Q96IC2 774 aaKnown RBP3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 ZBTB45Q96K62 511 aaPredicted RBP3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 CMTM3Q96MX0 182 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 MOGAT1Q96PD6 335 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 LENG8Q96PV6 779 aaPredicted RBP3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 HIST1H2AAQ96QV6 131 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 CITED2Q99967 270 aaPredicted RBP3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 THUMPD3Q9BV44 507 aaKnown RBP3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 SIK2Q9H0K1 926 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 ZCWPW1Q9H0M4 648 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 TAOK3Q9H2K8 898 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 MMADHCQ9H3L0 296 aaPredicted RBP3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 FAM83DQ9H4H8 585 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 SH2D4AQ9H788 454 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 SEMA4BQ9NPR2 832 aaPredicted RBP3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 FBXO34Q9NWN3 711 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 MORF4L1Q9UBU8 362 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 TBK1Q9UHD2 729 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 MOSPD1Q9UJG1 213 aa3.57□□□□□ -1.84
HERPUD1-211ENST00000566550 RAB21Q9UL25 225 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms