RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 AGO2Q9UKV8 859 aaKnown RBP3□□□□□ -1.93
CHD9-218ENST00000566029 FAM237BA0A1B0GVD1 139 aa3□□□□□ -1.93
CHD9-218ENST00000566029 SNAP91O60641 907 aa3□□□□□ -1.93
CHD9-218ENST00000566029 TFPTP0C1Z6 253 aa3□□□□□ -1.93
CHD9-218ENST00000566029 MLLT10P55197 1068 aa3□□□□□ -1.93
CHD9-218ENST00000566029 DCAF17Q5H9S7 520 aaPredicted RBP3□□□□□ -1.93
CHD9-218ENST00000566029 MFSD6Q6ZSS7 791 aa3□□□□□ -1.93
CHD9-218ENST00000566029 CATSPER3Q86XQ3 398 aa3□□□□□ -1.93
CHD9-218ENST00000566029 GALNT13Q8IUC8 556 aa3□□□□□ -1.93
CHD9-218ENST00000566029 CLVS1Q8IUQ0 354 aaPredicted RBP3□□□□□ -1.93
CHD9-218ENST00000566029 KCTD4Q8WVF5 259 aa3□□□□□ -1.93
CHD9-218ENST00000566029 TFB1MQ8WVM0 346 aaKnown RBP3□□□□□ -1.93
CHD9-218ENST00000566029 SERAC1Q96JX3 654 aa3□□□□□ -1.93
CHD9-218ENST00000566029 DHX33Q9H6R0 707 aaKnown RBP3□□□□□ -1.93
CHD9-218ENST00000566029 ARMC1Q9NVT9 282 aa3□□□□□ -1.93
CHD9-218ENST00000566029 CRNNQ9UBG3 495 aaPredicted RBP3□□□□□ -1.93
CHD9-218ENST00000566029 DNAJC12Q9UKB3 198 aa3□□□□□ -1.93
CHD9-218ENST00000566029 KRBA1A5PL33 1030 aa3□□□□□ -1.93
CHD9-218ENST00000566029 SIN3BO75182 1162 aa3□□□□□ -1.93
CHD9-218ENST00000566029 RNASEH2AO75792 299 aaKnown RBP3□□□□□ -1.93
CHD9-218ENST00000566029 ATF2P15336 505 aa3□□□□□ -1.93
CHD9-218ENST00000566029 PUM3Q15397 648 aaKnown RBP3□□□□□ -1.93
CHD9-218ENST00000566029 NFIL3Q16649 462 aa3□□□□□ -1.93
CHD9-218ENST00000566029 MGAT5BQ3V5L5 792 aa3□□□□□ -1.93
CHD9-218ENST00000566029 TPTE2Q6XPS3 522 aa3□□□□□ -1.93
CHD9-218ENST00000566029 ATL1Q8WXF7 558 aa3□□□□□ -1.93
CHD9-218ENST00000566029 GTPBP3Q969Y2 492 aaKnown RBP3□□□□□ -1.93
CHD9-218ENST00000566029 MTMR9Q96QG7 549 aa3□□□□□ -1.93
CHD9-218ENST00000566029 C1orf21Q9H246 121 aa3□□□□□ -1.93
CHD9-218ENST00000566029 SAYSD1Q9NPB0 183 aa3□□□□□ -1.93
CHD9-218ENST00000566029 ACP6Q9NPH0 428 aa3□□□□□ -1.93
CHD9-218ENST00000566029 TBK1Q9UHD2 729 aa3□□□□□ -1.93
CHD9-218ENST00000566029 SORCS3Q9UPU3 1222 aa3□□□□□ -1.93
CHD9-218ENST00000566029 EXOC1LA0A1B0GW35 172 aa3□□□□□ -1.93
CHD9-218ENST00000566029 SDR42E2A6NKP2 422 aa3□□□□□ -1.93
CHD9-218ENST00000566029 A8MV72 311 aaPredicted RBP3□□□□□ -1.93
CHD9-218ENST00000566029 TRIM77I1YAP6 450 aa3□□□□□ -1.93
CHD9-218ENST00000566029 SOCS7O14512 581 aa3□□□□□ -1.93
CHD9-218ENST00000566029 PSIP1O75475 530 aaKnown RBP3□□□□□ -1.93
CHD9-218ENST00000566029 TOMM70O94826 608 aa3□□□□□ -1.93
CHD9-218ENST00000566029 GNRH1P01148 92 aa3□□□□□ -1.93
CHD9-218ENST00000566029 CD247P20963 164 aa3□□□□□ -1.93
CHD9-218ENST00000566029 AQP5P55064 265 aa3□□□□□ -1.93
CHD9-218ENST00000566029 PTP4A2Q12974 167 aa3□□□□□ -1.93
CHD9-218ENST00000566029 C6orf10Q5SRN2 563 aa3□□□□□ -1.93
CHD9-218ENST00000566029 MINDY2Q8NBR6 621 aa3□□□□□ -1.93
CHD9-218ENST00000566029 PDPRQ8NCN5 879 aa3□□□□□ -1.93
CHD9-218ENST00000566029 LRRC59Q96AG4 307 aaKnown RBP3□□□□□ -1.93
CHD9-218ENST00000566029 ACDQ96AP0 544 aa3□□□□□ -1.93
CHD9-218ENST00000566029 SDCCAG3Q96C92 435 aa3□□□□□ -1.93
CHD9-218ENST00000566029 SNX18Q96RF0 628 aa3□□□□□ -1.93
CHD9-218ENST00000566029 SLC13A1Q9BZW2 595 aa3□□□□□ -1.93
CHD9-218ENST00000566029 RIMS3Q9UJD0 308 aa3□□□□□ -1.93
CHD9-218ENST00000566029 IPPQ9Y573 584 aa3□□□□□ -1.93
CHD9-218ENST00000566029 CORINQ9Y5Q5 1042 aa3□□□□□ -1.93
CHD9-218ENST00000566029 ZC3H11AO75152 810 aaKnown RBP eCLIP2.99□□□□□ -1.93
CHD9-218ENST00000566029 TRIM3O75382 744 aaPredicted RBP2.99□□□□□ -1.93
CHD9-218ENST00000566029 SCGNO76038 276 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 TMPRSS15P98073 1019 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 HSPA14Q0VDF9 509 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 TBRG1Q3YBR2 411 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 AGAP7PQ5VUJ5 663 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 KANSL1Q7Z3B3 1105 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 OR7G1Q8NGA0 311 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 MED30Q96HR3 178 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 PRDM11Q9NQV5 511 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 KCTD5Q9NXV2 234 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 ZNF229Q9UJW7 825 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 DNAJC16Q9Y2G8 782 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 AP4B1Q9Y6B7 739 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 PRR5-ARHGAP8B1AHC4 643 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 SCO2O43819 266 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 MCF2P10911 925 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 COMTP21964 271 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 PRKACBP22694 351 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 GSSP48637 474 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 C21orf59P57076 290 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 ARHGAP8P85298 464 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 MORF4L2Q15014 288 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 ACAP1Q15027 740 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 ZNF829Q3KNS6 432 aaPredicted RBP2.99□□□□□ -1.93
CHD9-218ENST00000566029 RALGPS1Q5JS13 557 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 SEL1L2Q5TEA6 688 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 SDE2Q6IQ49 451 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 CYP4F22Q6NT55 531 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 KDELC2Q7Z4H8 507 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 LUZP2Q86TE4 346 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 CIR1Q86X95 450 aaPredicted RBP2.99□□□□□ -1.93
CHD9-218ENST00000566029 ZBTB8AQ96BR9 441 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 TCF12Q99081 682 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 NCOR1P1Q9H4R4 102 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 SLC35C2Q9NQQ7 365 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 ASTN1O14525 1302 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 FRMPD2Q68DX3 1309 aaPredicted RBP2.99□□□□□ -1.93
CHD9-218ENST00000566029 RNF103-CHMP3A0A140T963 221 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 FADS2P1A8MWK0 482 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 NPIPA7E9PJI5 369 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 TRAF5O00463 557 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 CDK2AP1O14519 115 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 HAT1O14929 419 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms