RNA–Protein interactions for RNA: ENST00000565605.5

CNOT1-207, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-207ENST00000565605 CCDC6Q16204 474 aa10.05□□□□□ -0.8
CNOT1-207ENST00000565605 ANO4Q32M45 955 aa10.05□□□□□ -0.8
CNOT1-207ENST00000565605 TMEM196Q5HYL7 178 aa10.05□□□□□ -0.8
CNOT1-207ENST00000565605 N4BP2L1Q5TBK1 243 aaPredicted RBP10.05□□□□□ -0.8
CNOT1-207ENST00000565605 TAF3Q5VWG9 929 aa10.05□□□□□ -0.8
CNOT1-207ENST00000565605 FSTL4Q6MZW2 842 aa10.05□□□□□ -0.8
CNOT1-207ENST00000565605 APTXQ7Z2E3 356 aaKnown RBP10.05□□□□□ -0.8
CNOT1-207ENST00000565605 TMEM110Q86TL2 294 aa10.05□□□□□ -0.8
CNOT1-207ENST00000565605 LONP2Q86WA8 852 aa10.05□□□□□ -0.8
CNOT1-207ENST00000565605 ZNF677Q86XU0 584 aa10.05□□□□□ -0.8
CNOT1-207ENST00000565605 FMNL3Q8IVF7 1028 aa10.05□□□□□ -0.8
CNOT1-207ENST00000565605 SYNPOQ8N3V7 929 aa10.05□□□□□ -0.8
CNOT1-207ENST00000565605 SPEM1Q8N4L4 309 aa10.05□□□□□ -0.8
CNOT1-207ENST00000565605 WDTC1Q8N5D0 677 aa10.05□□□□□ -0.8
CNOT1-207ENST00000565605 FAM160A2Q8N612 972 aaPredicted RBP10.05□□□□□ -0.8
CNOT1-207ENST00000565605 PLD4Q96BZ4 506 aa10.05□□□□□ -0.8
CNOT1-207ENST00000565605 CHFRQ96EP1 664 aa10.05□□□□□ -0.8
CNOT1-207ENST00000565605 PPP1R13BQ96KQ4 1090 aa10.05□□□□□ -0.8
CNOT1-207ENST00000565605 RTN4Q9NQC3 1192 aaKnown RBP10.05□□□□□ -0.8
CNOT1-207ENST00000565605 SPHK2Q9NRA0 654 aa10.05□□□□□ -0.8
CNOT1-207ENST00000565605 SFMBT1Q9UHJ3 866 aa10.05□□□□□ -0.8
CNOT1-207ENST00000565605 HBS1LQ9Y450 684 aaKnown RBP10.05□□□□□ -0.8
CNOT1-207ENST00000565605 CACNA1GO43497 2377 aa10.05□□□□□ -0.8
CNOT1-207ENST00000565605 ANAPC1Q9H1A4 1944 aa10.05□□□□□ -0.8
CNOT1-207ENST00000565605 ZZEF1O43149 2961 aa10.05□□□□□ -0.8
CNOT1-207ENST00000565605 SPEGQ15772 3267 aa10.04□□□□□ -0.8
CNOT1-207ENST00000565605 LAMA1P25391 3075 aa10.04□□□□□ -0.8
CNOT1-207ENST00000565605 HELZP42694 1942 aaKnown RBP10.04□□□□□ -0.8
CNOT1-207ENST00000565605 HOXC11O43248 304 aaPredicted RBP10.04□□□□□ -0.8
CNOT1-207ENST00000565605 PAPSS1O43252 624 aaPredicted RBP10.04□□□□□ -0.8
CNOT1-207ENST00000565605 GREM1O60565 184 aa10.04□□□□□ -0.8
CNOT1-207ENST00000565605 PAPSS2O95340 614 aaPredicted RBP10.04□□□□□ -0.8
CNOT1-207ENST00000565605 EGFP01133 1207 aa10.04□□□□□ -0.8
CNOT1-207ENST00000565605 PMLP29590 882 aa10.04□□□□□ -0.8
CNOT1-207ENST00000565605 OPRD1P41143 372 aa10.04□□□□□ -0.8
CNOT1-207ENST00000565605 EIF2DP41214 584 aaKnown RBP10.04□□□□□ -0.8
CNOT1-207ENST00000565605 JAM2P57087 298 aa10.04□□□□□ -0.8
CNOT1-207ENST00000565605 YWHAZP63104 245 aaKnown RBP10.04□□□□□ -0.8
CNOT1-207ENST00000565605 CCINQ13939 588 aa10.04□□□□□ -0.8
CNOT1-207ENST00000565605 SF3A2Q15428 464 aaKnown RBP10.04□□□□□ -0.8
CNOT1-207ENST00000565605 TRIP4Q15650 581 aaPredicted RBP10.04□□□□□ -0.8
CNOT1-207ENST00000565605 NFKBIBQ15653 356 aa10.04□□□□□ -0.8
CNOT1-207ENST00000565605 FBXO43Q4G163 708 aa10.04□□□□□ -0.8
CNOT1-207ENST00000565605 PREPLQ4J6C6 727 aaPredicted RBP10.04□□□□□ -0.8
CNOT1-207ENST00000565605 EFHC1Q5JVL4 640 aa10.04□□□□□ -0.8
CNOT1-207ENST00000565605 PPP1R15BQ5SWA1 713 aa10.04□□□□□ -0.8
CNOT1-207ENST00000565605 OR6B2Q6IFH4 312 aa10.04□□□□□ -0.8
CNOT1-207ENST00000565605 MSANTD2Q6P1R3 559 aa10.04□□□□□ -0.8
CNOT1-207ENST00000565605 RHBDF2Q6PJF5 856 aa10.04□□□□□ -0.8
CNOT1-207ENST00000565605 TPGS1Q6ZTW0 290 aa10.04□□□□□ -0.8
CNOT1-207ENST00000565605 TOGARAM2Q6ZUX3 1019 aa10.04□□□□□ -0.8
CNOT1-207ENST00000565605 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.04□□□□□ -0.8
CNOT1-207ENST00000565605 NOP9Q86U38 636 aaKnown RBP10.04□□□□□ -0.8
CNOT1-207ENST00000565605 DENND1CQ8IV53 801 aa10.04□□□□□ -0.8
CNOT1-207ENST00000565605 MSANTD4Q8NCY6 345 aa10.04□□□□□ -0.8
CNOT1-207ENST00000565605 EPS8L1Q8TE68 723 aa10.04□□□□□ -0.8
CNOT1-207ENST00000565605 SERPINB11Q96P15 392 aa10.04□□□□□ -0.8
CNOT1-207ENST00000565605 CPXM1Q96SM3 734 aa10.04□□□□□ -0.8
CNOT1-207ENST00000565605 POPDC2Q9HBU9 364 aa10.04□□□□□ -0.8
CNOT1-207ENST00000565605 ASNSD1Q9NWL6 643 aa10.04□□□□□ -0.8
CNOT1-207ENST00000565605 AGO1Q9UL18 857 aaKnown RBP10.04□□□□□ -0.8
CNOT1-207ENST00000565605 ZNF638Q14966 1978 aaKnown RBP10.03□□□□□ -0.8
CNOT1-207ENST00000565605 A0A1B0GTH6 734 aa10.03□□□□□ -0.8
CNOT1-207ENST00000565605 A0A1W2PQC6 194 aa10.03□□□□□ -0.8
CNOT1-207ENST00000565605 NEDD8-MDP1E9PL57 170 aa10.03□□□□□ -0.8
CNOT1-207ENST00000565605 AXIN1O15169 862 aa10.03□□□□□ -0.8
CNOT1-207ENST00000565605 TEX33O43247 280 aa10.03□□□□□ -0.8
CNOT1-207ENST00000565605 MSI1O43347 362 aaKnown RBP10.03□□□□□ -0.8
CNOT1-207ENST00000565605 ATG13O75143 517 aa10.03□□□□□ -0.8
CNOT1-207ENST00000565605 LSM8O95777 96 aaKnown RBP10.03□□□□□ -0.8
CNOT1-207ENST00000565605 KLKB1P03952 638 aa10.03□□□□□ -0.8
CNOT1-207ENST00000565605 ERBB2P04626 1255 aa10.03□□□□□ -0.8
CNOT1-207ENST00000565605 CYBBP04839 570 aa10.03□□□□□ -0.8
CNOT1-207ENST00000565605 APODP05090 189 aa10.03□□□□□ -0.8
CNOT1-207ENST00000565605 GLI1P08151 1106 aa10.03□□□□□ -0.8
CNOT1-207ENST00000565605 MMEP08473 750 aa10.03□□□□□ -0.8
CNOT1-207ENST00000565605 CCDC172P0C7W6 258 aa10.03□□□□□ -0.8
CNOT1-207ENST00000565605 CDH5P33151 784 aaPredicted RBP10.03□□□□□ -0.8
CNOT1-207ENST00000565605 CNR2P34972 360 aa10.03□□□□□ -0.8
CNOT1-207ENST00000565605 CHKAP35790 457 aa10.03□□□□□ -0.8
CNOT1-207ENST00000565605 TBX4P57082 545 aa10.03□□□□□ -0.8
CNOT1-207ENST00000565605 FANCCQ00597 558 aa10.03□□□□□ -0.8
CNOT1-207ENST00000565605 CDR2Q01850 454 aa10.03□□□□□ -0.8
CNOT1-207ENST00000565605 GAB4Q2WGN9 574 aa10.03□□□□□ -0.8
CNOT1-207ENST00000565605 PTPN20Q4JDL3 420 aa10.03□□□□□ -0.8
CNOT1-207ENST00000565605 NAIF1Q69YI7 327 aaPredicted RBP10.03□□□□□ -0.8
CNOT1-207ENST00000565605 TRIM72Q6ZMU5 477 aa10.03□□□□□ -0.8
CNOT1-207ENST00000565605 BEND5Q7L4P6 421 aa10.03□□□□□ -0.8
CNOT1-207ENST00000565605 C12orf40Q86WS4 652 aa10.03□□□□□ -0.8
CNOT1-207ENST00000565605 TMEM25Q86YD3 366 aa10.03□□□□□ -0.8
CNOT1-207ENST00000565605 ZDHHC17Q8IUH5 632 aa10.03□□□□□ -0.8
CNOT1-207ENST00000565605 CCDC26Q8TAB7 109 aa10.03□□□□□ -0.8
CNOT1-207ENST00000565605 DQX1Q8TE96 717 aaKnown RBP10.03□□□□□ -0.8
CNOT1-207ENST00000565605 DDX1Q92499 740 aaKnown RBP10.03□□□□□ -0.8
CNOT1-207ENST00000565605 NAP1L5Q96NT1 182 aaPredicted RBP10.03□□□□□ -0.8
CNOT1-207ENST00000565605 XPO6Q96QU8 1125 aaKnown RBP10.03□□□□□ -0.8
CNOT1-207ENST00000565605 PNKPQ96T60 521 aa10.03□□□□□ -0.8
CNOT1-207ENST00000565605 BBS2Q9BXC9 721 aa10.03□□□□□ -0.8
CNOT1-207ENST00000565605 CEP295Q9C0D2 2601 aa10.03□□□□□ -0.8
CNOT1-207ENST00000565605 TSPY26PQ9H489 355 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms