RNA–Protein interactions for RNA: ENST00000565507.5

SCAPER-215, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 5

Gene SCAPER, Length 2,627 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-215	ENST00000565507	XAB2	Q9HCS7	855 aa	Known RBP	13.59	□□□□□ -0.23
SCAPER-215	ENST00000565507	DTL	Q9NZJ0	730 aa		13.59	□□□□□ -0.23
SCAPER-215	ENST00000565507	STX18	Q9P2W9	335 aa	Known RBP	13.59	□□□□□ -0.23
SCAPER-215	ENST00000565507	MARCO	Q9UEW3	520 aa	Predicted RBP	13.59	□□□□□ -0.23
SCAPER-215	ENST00000565507	PLA2G4C	Q9UP65	541 aa		13.59	□□□□□ -0.23
SCAPER-215	ENST00000565507	HBS1L	Q9Y450	684 aa	Known RBP	13.59	□□□□□ -0.23
SCAPER-215	ENST00000565507	PLXNA1	Q9UIW2	1896 aa		13.58	□□□□□ -0.24
SCAPER-215	ENST00000565507	CAPN9	O14815	690 aa		13.58	□□□□□ -0.24
SCAPER-215	ENST00000565507	SMPD1	P17405	629 aa		13.58	□□□□□ -0.24
SCAPER-215	ENST00000565507	PGM1	P36871	562 aa		13.58	□□□□□ -0.24
SCAPER-215	ENST00000565507	GRM5	P41594	1212 aa		13.58	□□□□□ -0.24
SCAPER-215	ENST00000565507	SERPINB9	P50453	376 aa		13.58	□□□□□ -0.24
SCAPER-215	ENST00000565507	SLC34A1	Q06495	639 aa		13.58	□□□□□ -0.24
SCAPER-215	ENST00000565507	STEAP4	Q687X5	459 aa		13.58	□□□□□ -0.24
SCAPER-215	ENST00000565507	MTHFD1L	Q6UB35	978 aa		13.58	□□□□□ -0.24
SCAPER-215	ENST00000565507	SLC26A9	Q7LBE3	791 aa		13.58	□□□□□ -0.24
SCAPER-215	ENST00000565507	SMC1B	Q8NDV3	1235 aa		13.58	□□□□□ -0.24
SCAPER-215	ENST00000565507	KCTD15	Q96SI1	283 aa	Predicted RBP	13.58	□□□□□ -0.24
SCAPER-215	ENST00000565507	CCDC106	Q9BWC9	280 aa		13.58	□□□□□ -0.24
SCAPER-215	ENST00000565507	WWP1	Q9H0M0	922 aa		13.58	□□□□□ -0.24
SCAPER-215	ENST00000565507	FLRT1	Q9NZU1	646 aa		13.58	□□□□□ -0.24
SCAPER-215	ENST00000565507	PPARGC1A	Q9UBK2	798 aa	Known RBP	13.58	□□□□□ -0.24
SCAPER-215	ENST00000565507	AP4E1	Q9UPM8	1137 aa		13.58	□□□□□ -0.24
SCAPER-215	ENST00000565507	MFHAS1	Q9Y4C4	1052 aa		13.58	□□□□□ -0.24
SCAPER-215	ENST00000565507	USP3	Q9Y6I4	520 aa		13.58	□□□□□ -0.24
SCAPER-215	ENST00000565507	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	13.58	□□□□□ -0.24
SCAPER-215	ENST00000565507	CIT	O14578	2027 aa		13.58	□□□□□ -0.24
SCAPER-215	ENST00000565507		H3BRJ5	948 aa		13.58	□□□□□ -0.24
SCAPER-215	ENST00000565507	HCRT	O43612	131 aa		13.58	□□□□□ -0.24
SCAPER-215	ENST00000565507	TOMM70	O94826	608 aa		13.58	□□□□□ -0.24
SCAPER-215	ENST00000565507	ENO1	P06733	434 aa	Known RBP	13.58	□□□□□ -0.24
SCAPER-215	ENST00000565507	LINGO3	P0C6S8	592 aa		13.58	□□□□□ -0.24
SCAPER-215	ENST00000565507	KIT	P10721	976 aa		13.58	□□□□□ -0.24
SCAPER-215	ENST00000565507	ZBTB6	Q15916	424 aa		13.58	□□□□□ -0.24
SCAPER-215	ENST00000565507	CCL14	Q16627	93 aa		13.58	□□□□□ -0.24
SCAPER-215	ENST00000565507	SOWAHA	Q2M3V2	549 aa		13.58	□□□□□ -0.24
SCAPER-215	ENST00000565507	TSNAXIP1	Q2TAA8	658 aa		13.58	□□□□□ -0.24
SCAPER-215	ENST00000565507	ARHGAP17	Q68EM7	881 aa		13.58	□□□□□ -0.24
SCAPER-215	ENST00000565507	NCBP2-AS2	Q69YL0	99 aa		13.58	□□□□□ -0.24
SCAPER-215	ENST00000565507	ZCCHC23	Q6ZST2	131 aa		13.58	□□□□□ -0.24
SCAPER-215	ENST00000565507	CCDC185	Q8N715	623 aa		13.58	□□□□□ -0.24
SCAPER-215	ENST00000565507	NLRP7	Q8WX94	980 aa		13.58	□□□□□ -0.24
SCAPER-215	ENST00000565507	MAML3	Q96JK9	1138 aa		13.58	□□□□□ -0.24
SCAPER-215	ENST00000565507	OLFM3	Q96PB7	478 aa		13.58	□□□□□ -0.24
SCAPER-215	ENST00000565507	LBHD1	Q9BQE6	289 aa	Predicted RBP	13.58	□□□□□ -0.24
SCAPER-215	ENST00000565507	DPEP3	Q9H4B8	488 aa		13.58	□□□□□ -0.24
SCAPER-215	ENST00000565507	PLXNB2	O15031	1838 aa		13.57	□□□□□ -0.24
SCAPER-215	ENST00000565507	TRIP11	Q15643	1979 aa		13.57	□□□□□ -0.24
SCAPER-215	ENST00000565507	DCAF8L1	A6NGE4	600 aa		13.57	□□□□□ -0.24
SCAPER-215	ENST00000565507		A8MXQ7	604 aa		13.57	□□□□□ -0.24
SCAPER-215	ENST00000565507	DGKI	O75912	1065 aa		13.57	□□□□□ -0.24
SCAPER-215	ENST00000565507	VAV1	P15498	845 aa		13.57	□□□□□ -0.24
SCAPER-215	ENST00000565507	ZFX	P17010	805 aa	Predicted RBP	13.57	□□□□□ -0.24
SCAPER-215	ENST00000565507	AMPD1	P23109	780 aa		13.57	□□□□□ -0.24
SCAPER-215	ENST00000565507	LAMC2	Q13753	1193 aa		13.57	□□□□□ -0.24
SCAPER-215	ENST00000565507	CCDC6	Q16204	474 aa		13.57	□□□□□ -0.24
SCAPER-215	ENST00000565507	MUM1	Q2TAK8	710 aa		13.57	□□□□□ -0.24
SCAPER-215	ENST00000565507	ARC	Q7LC44	396 aa		13.57	□□□□□ -0.24
SCAPER-215	ENST00000565507	CRLF3	Q8IUI8	442 aa		13.57	□□□□□ -0.24
SCAPER-215	ENST00000565507	SHCBP1	Q8NEM2	672 aa		13.57	□□□□□ -0.24
SCAPER-215	ENST00000565507	DEPDC1B	Q8WUY9	529 aa		13.57	□□□□□ -0.24
SCAPER-215	ENST00000565507	EBF4	Q9BQW3	602 aa		13.57	□□□□□ -0.24
SCAPER-215	ENST00000565507	C16orf70	Q9BSU1	422 aa		13.57	□□□□□ -0.24
SCAPER-215	ENST00000565507	EMCN	Q9ULC0	261 aa		13.57	□□□□□ -0.24
SCAPER-215	ENST00000565507	WDR27	A2RRH5	827 aa		13.57	□□□□□ -0.24
SCAPER-215	ENST00000565507		A6NJR5	290 aa		13.57	□□□□□ -0.24
SCAPER-215	ENST00000565507	ALDOA	P04075	364 aa	Known RBP	13.57	□□□□□ -0.24
SCAPER-215	ENST00000565507	RPL34	P49207	117 aa	Known RBP	13.57	□□□□□ -0.24
SCAPER-215	ENST00000565507	NIPAL4	Q0D2K0	466 aa		13.57	□□□□□ -0.24
SCAPER-215	ENST00000565507	TMEM62	Q0P6H9	643 aa		13.57	□□□□□ -0.24
SCAPER-215	ENST00000565507	WASHC5	Q12768	1159 aa		13.57	□□□□□ -0.24
SCAPER-215	ENST00000565507	THOC5	Q13769	683 aa	Known RBP	13.57	□□□□□ -0.24
SCAPER-215	ENST00000565507	MARCH8	Q5T0T0	291 aa		13.57	□□□□□ -0.24
SCAPER-215	ENST00000565507	HEATR6	Q6AI08	1181 aa	Known RBP	13.57	□□□□□ -0.24
SCAPER-215	ENST00000565507	LRRC74B	Q6ZQY2	392 aa		13.57	□□□□□ -0.24
SCAPER-215	ENST00000565507	ANKRD23	Q86SG2	305 aa		13.57	□□□□□ -0.24
SCAPER-215	ENST00000565507	LMNTD2	Q8IXW0	634 aa		13.57	□□□□□ -0.24
SCAPER-215	ENST00000565507	C7orf31	Q8N865	590 aa		13.57	□□□□□ -0.24
SCAPER-215	ENST00000565507	PDCD7	Q8N8D1	485 aa	Known RBP	13.57	□□□□□ -0.24
SCAPER-215	ENST00000565507	DTX3L	Q8TDB6	740 aa		13.57	□□□□□ -0.24
SCAPER-215	ENST00000565507	SCG3	Q8WXD2	468 aa	Known RBP	13.57	□□□□□ -0.24
SCAPER-215	ENST00000565507	ZNF778	Q96MU6	729 aa		13.57	□□□□□ -0.24
SCAPER-215	ENST00000565507	THAP1	Q9NVV9	213 aa		13.57	□□□□□ -0.24
SCAPER-215	ENST00000565507	SLC17A6	Q9P2U8	582 aa		13.57	□□□□□ -0.24
SCAPER-215	ENST00000565507	TUBGCP4	Q9UGJ1	667 aa		13.57	□□□□□ -0.24
SCAPER-215	ENST00000565507	TAGLN3	Q9UI15	199 aa		13.57	□□□□□ -0.24
SCAPER-215	ENST00000565507	DPPA5	A6NC42	116 aa		13.56	□□□□□ -0.24
SCAPER-215	ENST00000565507	SDR42E2	A6NKP2	422 aa		13.56	□□□□□ -0.24
SCAPER-215	ENST00000565507	PDHA1	P08559	390 aa		13.56	□□□□□ -0.24
SCAPER-215	ENST00000565507	CNTF	P26441	200 aa		13.56	□□□□□ -0.24
SCAPER-215	ENST00000565507	HOXA11	P31270	313 aa	Predicted RBP	13.56	□□□□□ -0.24
SCAPER-215	ENST00000565507	STX3	Q13277	289 aa		13.56	□□□□□ -0.24
SCAPER-215	ENST00000565507	MDH1B	Q5I0G3	518 aa		13.56	□□□□□ -0.24
SCAPER-215	ENST00000565507	STXBP5	Q5T5C0	1151 aa		13.56	□□□□□ -0.24
SCAPER-215	ENST00000565507	KYAT3	Q6YP21	454 aa	Known RBP	13.56	□□□□□ -0.24
SCAPER-215	ENST00000565507	DENND5B	Q6ZUT9	1274 aa		13.56	□□□□□ -0.24
SCAPER-215	ENST00000565507	MARK2	Q7KZI7	788 aa	Known RBP	13.56	□□□□□ -0.24
SCAPER-215	ENST00000565507	PYROXD2	Q8N2H3	581 aa		13.56	□□□□□ -0.24
SCAPER-215	ENST00000565507	HTR3C	Q8WXA8	447 aa		13.56	□□□□□ -0.24
SCAPER-215	ENST00000565507	ARNTL2	Q8WYA1	636 aa		13.56	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms