RNA–Protein interactions for RNA: ENST00000564778.5

SIN3A-205, Transcript of SIN3 transcription regulator family member A, human

TSL 2

Gene SIN3A, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SIN3A-205	ENST00000564778	VCAN	P13611	3396 aa		10.21	□□□□□ -0.77
SIN3A-205	ENST00000564778	SLC12A8	A0AV02	714 aa		10.21	□□□□□ -0.77
SIN3A-205	ENST00000564778	C3orf70	A6NLC5	250 aa	Predicted RBP	10.21	□□□□□ -0.77
SIN3A-205	ENST00000564778	KCNK3	O14649	394 aa		10.21	□□□□□ -0.77
SIN3A-205	ENST00000564778	LATS1	O95835	1130 aa		10.21	□□□□□ -0.77
SIN3A-205	ENST00000564778	APOE	P02649	317 aa		10.21	□□□□□ -0.77
SIN3A-205	ENST00000564778	KRT1	P04264	644 aa		10.21	□□□□□ -0.77
SIN3A-205	ENST00000564778	MBL2	P11226	248 aa	Predicted RBP	10.21	□□□□□ -0.77
SIN3A-205	ENST00000564778	TCF3	P15923	654 aa		10.21	□□□□□ -0.77
SIN3A-205	ENST00000564778	GJA1	P17302	382 aa		10.21	□□□□□ -0.77
SIN3A-205	ENST00000564778	CEBPB	P17676	345 aa		10.21	□□□□□ -0.77
SIN3A-205	ENST00000564778	GJC1	P36383	396 aa		10.21	□□□□□ -0.77
SIN3A-205	ENST00000564778	SSR1	P43307	286 aa	Known RBP	10.21	□□□□□ -0.77
SIN3A-205	ENST00000564778	COPS2	P61201	443 aa		10.21	□□□□□ -0.77
SIN3A-205	ENST00000564778	NRG1	Q02297	640 aa	Predicted RBP	10.21	□□□□□ -0.77
SIN3A-205	ENST00000564778	DLX2	Q07687	328 aa	Predicted RBP	10.21	□□□□□ -0.77
SIN3A-205	ENST00000564778	TUBB2A	Q13885	445 aa		10.21	□□□□□ -0.77
SIN3A-205	ENST00000564778	PDK2	Q15119	407 aa		10.21	□□□□□ -0.77
SIN3A-205	ENST00000564778	ZC3H12A	Q5D1E8	599 aa	Known RBP	10.21	□□□□□ -0.77
SIN3A-205	ENST00000564778	EFHC2	Q5JST6	749 aa		10.21	□□□□□ -0.77
SIN3A-205	ENST00000564778	TJAP1	Q5JTD0	557 aa		10.21	□□□□□ -0.77
SIN3A-205	ENST00000564778	KCNT1	Q5JUK3	1230 aa		10.21	□□□□□ -0.77
SIN3A-205	ENST00000564778	STXBP5	Q5T5C0	1151 aa		10.21	□□□□□ -0.77
SIN3A-205	ENST00000564778	GPR158	Q5T848	1215 aa		10.21	□□□□□ -0.77
SIN3A-205	ENST00000564778	SCYL2	Q6P3W7	929 aa		10.21	□□□□□ -0.77
SIN3A-205	ENST00000564778	MIB1	Q86YT6	1006 aa		10.21	□□□□□ -0.77
SIN3A-205	ENST00000564778	UNC45B	Q8IWX7	931 aa		10.21	□□□□□ -0.77
SIN3A-205	ENST00000564778	CMTM8	Q8IZV2	173 aa		10.21	□□□□□ -0.77
SIN3A-205	ENST00000564778	RASGEF1C	Q8N431	466 aa		10.21	□□□□□ -0.77
SIN3A-205	ENST00000564778	KIAA1958	Q8N8K9	716 aa		10.21	□□□□□ -0.77
SIN3A-205	ENST00000564778	SMRP1	Q8NCR6	262 aa		10.21	□□□□□ -0.77
SIN3A-205	ENST00000564778	RAPGEF5	Q92565	580 aa		10.21	□□□□□ -0.77
SIN3A-205	ENST00000564778	TSC1	Q92574	1164 aa		10.21	□□□□□ -0.77
SIN3A-205	ENST00000564778	AZIN2	Q96A70	460 aa		10.21	□□□□□ -0.77
SIN3A-205	ENST00000564778	FAF2	Q96CS3	445 aa		10.21	□□□□□ -0.77
SIN3A-205	ENST00000564778	HAPLN3	Q96S86	360 aa		10.21	□□□□□ -0.77
SIN3A-205	ENST00000564778	ZNF670	Q9BS34	389 aa		10.21	□□□□□ -0.77
SIN3A-205	ENST00000564778	TUBB2B	Q9BVA1	445 aa		10.21	□□□□□ -0.77
SIN3A-205	ENST00000564778	SLC46A2	Q9BY10	475 aa		10.21	□□□□□ -0.77
SIN3A-205	ENST00000564778	TKTL2	Q9H0I9	626 aa		10.21	□□□□□ -0.77
SIN3A-205	ENST00000564778	OSBPL2	Q9H1P3	480 aa		10.21	□□□□□ -0.77
SIN3A-205	ENST00000564778	TRPC7	Q9HCX4	862 aa		10.21	□□□□□ -0.77
SIN3A-205	ENST00000564778	KLHL11	Q9NVR0	708 aa		10.21	□□□□□ -0.77
SIN3A-205	ENST00000564778	CLDND1	Q9NY35	253 aa		10.21	□□□□□ -0.77
SIN3A-205	ENST00000564778	STOML2	Q9UJZ1	356 aa		10.21	□□□□□ -0.77
SIN3A-205	ENST00000564778	TTC7A	Q9ULT0	858 aa	Predicted RBP	10.21	□□□□□ -0.77
SIN3A-205	ENST00000564778	MRPS23	Q9Y3D9	190 aa	Known RBP	10.21	□□□□□ -0.77
SIN3A-205	ENST00000564778	LRRD1	A4D1F6	860 aa		10.2	□□□□□ -0.78
SIN3A-205	ENST00000564778	DLL1	O00548	723 aa		10.2	□□□□□ -0.78
SIN3A-205	ENST00000564778	GREM1	O60565	184 aa		10.2	□□□□□ -0.78
SIN3A-205	ENST00000564778	STC2	O76061	302 aa		10.2	□□□□□ -0.78
SIN3A-205	ENST00000564778	ZRANB2	O95218	330 aa	Known RBP eCLIP	10.2	□□□□□ -0.78
SIN3A-205	ENST00000564778	CKM	P06732	381 aa		10.2	□□□□□ -0.78
SIN3A-205	ENST00000564778	PYGM	P11217	842 aa		10.2	□□□□□ -0.78
SIN3A-205	ENST00000564778	HDC	P19113	662 aa		10.2	□□□□□ -0.78
SIN3A-205	ENST00000564778	FSHR	P23945	695 aa		10.2	□□□□□ -0.78
SIN3A-205	ENST00000564778	KDELR1	P24390	212 aa		10.2	□□□□□ -0.78
SIN3A-205	ENST00000564778	HOXC13	P31276	330 aa		10.2	□□□□□ -0.78
SIN3A-205	ENST00000564778	L1CAM	P32004	1257 aa		10.2	□□□□□ -0.78
SIN3A-205	ENST00000564778	HTR7	P34969	479 aa		10.2	□□□□□ -0.78
SIN3A-205	ENST00000564778	CDKN2B	P42772	138 aa		10.2	□□□□□ -0.78
SIN3A-205	ENST00000564778	MTHFR	P42898	656 aa		10.2	□□□□□ -0.78
SIN3A-205	ENST00000564778	DNA2	P51530	1060 aa		10.2	□□□□□ -0.78
SIN3A-205	ENST00000564778	USP4	Q13107	963 aa		10.2	□□□□□ -0.78
SIN3A-205	ENST00000564778	DPYSL3	Q14195	570 aa		10.2	□□□□□ -0.78
SIN3A-205	ENST00000564778	CA9	Q16790	459 aa		10.2	□□□□□ -0.78
SIN3A-205	ENST00000564778	ATP13A4	Q4VNC1	1196 aa		10.2	□□□□□ -0.78
SIN3A-205	ENST00000564778	ARTN	Q5T4W7	220 aa		10.2	□□□□□ -0.78
SIN3A-205	ENST00000564778	SEL1L2	Q5TEA6	688 aa		10.2	□□□□□ -0.78
SIN3A-205	ENST00000564778	MANEAL	Q5VSG8	457 aa		10.2	□□□□□ -0.78
SIN3A-205	ENST00000564778	CES5A	Q6NT32	575 aa		10.2	□□□□□ -0.78
SIN3A-205	ENST00000564778		Q6ZNB5	142 aa		10.2	□□□□□ -0.78
SIN3A-205	ENST00000564778	DDX42	Q86XP3	938 aa	Known RBP eCLIP	10.2	□□□□□ -0.78
SIN3A-205	ENST00000564778	NPAS3	Q8IXF0	933 aa		10.2	□□□□□ -0.78
SIN3A-205	ENST00000564778	RCOR2	Q8IZ40	523 aa		10.2	□□□□□ -0.78
SIN3A-205	ENST00000564778	ARL14EP	Q8N8R7	260 aa	Predicted RBP	10.2	□□□□□ -0.78
SIN3A-205	ENST00000564778	MAB21L3	Q8N8X9	362 aa		10.2	□□□□□ -0.78
SIN3A-205	ENST00000564778	ITFG1	Q8TB96	612 aa		10.2	□□□□□ -0.78
SIN3A-205	ENST00000564778	ACTRT1	Q8TDG2	376 aa		10.2	□□□□□ -0.78
SIN3A-205	ENST00000564778	ADAMTS19	Q8TE59	1207 aa		10.2	□□□□□ -0.78
SIN3A-205	ENST00000564778	COG1	Q8WTW3	980 aa		10.2	□□□□□ -0.78
SIN3A-205	ENST00000564778	HSPH1	Q92598	858 aa		10.2	□□□□□ -0.78
SIN3A-205	ENST00000564778	HLA-C	Q95604	372 aa		10.2	□□□□□ -0.78
SIN3A-205	ENST00000564778	ACSF2	Q96CM8	615 aa	Predicted RBP	10.2	□□□□□ -0.78
SIN3A-205	ENST00000564778	BTN2A3P	Q96KV6	586 aa		10.2	□□□□□ -0.78
SIN3A-205	ENST00000564778	C1orf74	Q96LT6	269 aa		10.2	□□□□□ -0.78
SIN3A-205	ENST00000564778	ASB2	Q96Q27	587 aa		10.2	□□□□□ -0.78
SIN3A-205	ENST00000564778	KCTD15	Q96SI1	283 aa	Predicted RBP	10.2	□□□□□ -0.78
SIN3A-205	ENST00000564778	L2HGDH	Q9H9P8	463 aa		10.2	□□□□□ -0.78
SIN3A-205	ENST00000564778	KIF9	Q9HAQ2	790 aa		10.2	□□□□□ -0.78
SIN3A-205	ENST00000564778	PCDH18	Q9HCL0	1135 aa		10.2	□□□□□ -0.78
SIN3A-205	ENST00000564778	PRDM6	Q9NQX0	595 aa		10.2	□□□□□ -0.78
SIN3A-205	ENST00000564778	GPATCH2L	Q9NWQ4	482 aa		10.2	□□□□□ -0.78
SIN3A-205	ENST00000564778	GDE1	Q9NZC3	331 aa		10.2	□□□□□ -0.78
SIN3A-205	ENST00000564778	RNF14	Q9UBS8	474 aa		10.2	□□□□□ -0.78
SIN3A-205	ENST00000564778	CDC23	Q9UJX2	597 aa		10.2	□□□□□ -0.78
SIN3A-205	ENST00000564778	NEU3	Q9UQ49	428 aa		10.2	□□□□□ -0.78
SIN3A-205	ENST00000564778	EFR3B	Q9Y2G0	817 aa		10.2	□□□□□ -0.78
SIN3A-205	ENST00000564778	MRFAP1	Q9Y605	127 aa		10.2	□□□□□ -0.78
SIN3A-205	ENST00000564778	CPQ	Q9Y646	472 aa		10.2	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms