RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	CD3EAP	O15446	510 aa	Known RBP	4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	CD40LG	P29965	261 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	FASTKD1	Q53R41	847 aa	Known RBP	4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	PNMA1	Q8ND90	353 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	HTATIP2	Q9BUP3	242 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	COQ10B	Q9H8M1	238 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	DNAJC11	Q9NVH1	559 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	APEX2	Q9UBZ4	518 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	ZNF221	Q9UK13	617 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	VPS28	Q9UK41	221 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	ERGIC3	Q9Y282	383 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	FBXO21	O94952	628 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	ANXA6	P08133	673 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	HIRA	P54198	1017 aa	Predicted RBP	4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	POU5F1	Q01860	360 aa	Known RBP	4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	FAXC	Q5TGI0	409 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	MZT2A	Q6P582	158 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	ADGRD1	Q6QNK2	874 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	SAPCD2	Q86UD0	394 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	DSEL	Q8IZU8	1212 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	GTF3C2	Q8WUA4	911 aa	Predicted RBP	4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	ZNF486	Q96H40	463 aa	Predicted RBP	4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	CACNA2D2	Q9NY47	1150 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	CYP26A1	O43174	497 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	IL6	P05231	212 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	SNRPB2	P08579	225 aa	Known RBP	4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	OGN	P20774	298 aa	Known RBP	4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	EIF4B	P23588	611 aa	Known RBP	4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	FMO5	P49326	533 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	SDE2	Q6IQ49	451 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	LRRC8D	Q7L1W4	858 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	GAB3	Q8WWW8	586 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	PIDD1	Q9HB75	910 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	SALL3	Q9BXA9	1300 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	ZNF862	O60290	1169 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	NADK	O95544	446 aa	Predicted RBP	4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	ANKDD1A	Q495B1	522 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	TMEM53	Q6P2H8	277 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	ZNF767P	Q75MW2	155 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	CITED4	Q96RK1	184 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	CDC42EP4	Q9H3Q1	356 aa	Known RBP	4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	MLX	Q9UH92	298 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	NUAK1	O60285	661 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	RECQL5	O94762	991 aa	Predicted RBP	4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	ITGA6	P23229	1130 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	GNL1	P36915	607 aa	Predicted RBP	4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	SPCS2	Q15005	226 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	EPHA7	Q15375	998 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	TRIP4	Q15650	581 aa	Predicted RBP	4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	ILDR1	Q86SU0	546 aa	Predicted RBP	4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	STON2	Q8WXE9	905 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	TRIM51	Q9BSJ1	452 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	CATSPERZ	Q9NTU4	200 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	TTLL12	Q14166	644 aa	Predicted RBP	4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	FAM83E	Q2M2I3	478 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	INTS11	Q5TA45	600 aa	Known RBP	4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	RHPN2	Q8IUC4	686 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	CCNYL1	Q8N7R7	359 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	TMC2	Q8TDI7	906 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	KCTD4	Q8WVF5	259 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	FAM136A	Q96C01	138 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	DCUN1D5	Q9BTE7	237 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	RAB6B	Q9NRW1	208 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	AP4B1	Q9Y6B7	739 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	DLGAP5	Q15398	846 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	SERPINB13	Q9UIV8	391 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	PCDHA1	Q9Y5I3	950 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	GDF11	O95390	407 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	CHSY1	Q86X52	802 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	ZNF564	Q8TBZ8	553 aa	Predicted RBP	4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	MCOLN3	Q8TDD5	553 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	PLEKHA5	Q9HAU0	1116 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	LRRC4	Q9HBW1	653 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	PROSC	O94903	275 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	YAP1	P46937	504 aa	Known RBP	4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	BMX	P51813	675 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	CEP170P1	Q96L14	293 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	MYL10	Q9BUA6	226 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	RANBP3	Q9H6Z4	567 aa	Predicted RBP	4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	PRDM11	Q9NQV5	511 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	ZDHHC18	Q9NUE0	388 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	NCKIPSD	Q9NZQ3	722 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	FAM47E-STBD1	D6RA91	191 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288		H3BNH8	94 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	CABYR	O75952	493 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	GRM2	Q14416	872 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	DUOXA2	Q1HG44	320 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	ZNF560	Q96MR9	790 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	AS3MT	Q9HBK9	375 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	FAM91A1	Q658Y4	838 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	BEND4	Q6ZU67	534 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	CCDC149	Q6ZUS6	474 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	DNAJA4	Q8WW22	397 aa	Predicted RBP	4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	BAP1	Q92560	729 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	ROBO3	Q96MS0	1386 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	TIMM44	O43615	452 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	NPPA	P01160	153 aa		4.35	□□□□□ -1.71
MACF1-231	ENST00000564288	MYL7	Q01449	175 aa		4.35	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 21 ms