RNA–Protein interactions for RNA: ENST00000563605.1

AC009088.3-201, humanhuman

TSL 3 BASIC

Gene AC009088.3, Length 357 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009088.3-201ENST00000563605 GEN1Q17RS7 908 aa16.22■□□□□ 0.19
AC009088.3-201ENST00000563605 ZC3H12AQ5D1E8 599 aaKnown RBP16.22■□□□□ 0.19
AC009088.3-201ENST00000563605 EFHC1Q5JVL4 640 aa16.22■□□□□ 0.19
AC009088.3-201ENST00000563605 NUGGCQ68CJ6 796 aa16.22■□□□□ 0.19
AC009088.3-201ENST00000563605 LAIR1Q6GTX8 287 aa16.22■□□□□ 0.19
AC009088.3-201ENST00000563605 FAM183BPQ6ZVS7 135 aa16.22■□□□□ 0.19
AC009088.3-201ENST00000563605 TRMT11Q7Z4G4 463 aaKnown RBP16.22■□□□□ 0.19
AC009088.3-201ENST00000563605 NOP9Q86U38 636 aaKnown RBP16.22■□□□□ 0.19
AC009088.3-201ENST00000563605 KBTBD6Q86V97 674 aa16.22■□□□□ 0.19
AC009088.3-201ENST00000563605 FAM217AQ8IXS0 508 aa16.22■□□□□ 0.19
AC009088.3-201ENST00000563605 FAM160A2Q8N612 972 aaPredicted RBP16.22■□□□□ 0.19
AC009088.3-201ENST00000563605 TMEM35BQ8NCS4 154 aa16.22■□□□□ 0.19
AC009088.3-201ENST00000563605 IPO4Q8TEX9 1081 aaKnown RBP16.22■□□□□ 0.19
AC009088.3-201ENST00000563605 HMGB4Q8WW32 186 aa16.22■□□□□ 0.19
AC009088.3-201ENST00000563605 FCRL2Q96LA5 508 aaPredicted RBP16.22■□□□□ 0.19
AC009088.3-201ENST00000563605 SERPINB11Q96P15 392 aa16.22■□□□□ 0.19
AC009088.3-201ENST00000563605 TRIM62Q9BVG3 475 aa16.22■□□□□ 0.19
AC009088.3-201ENST00000563605 HSD3B7Q9H2F3 369 aa16.22■□□□□ 0.19
AC009088.3-201ENST00000563605 CACNA2D2Q9NY47 1150 aa16.22■□□□□ 0.19
AC009088.3-201ENST00000563605 EBF1Q9UH73 591 aa16.22■□□□□ 0.19
AC009088.3-201ENST00000563605 FANCMQ8IYD8 2048 aa16.22■□□□□ 0.19
AC009088.3-201ENST00000563605 LGALS16A8MUM7 142 aa16.21■□□□□ 0.19
AC009088.3-201ENST00000563605 WASH3PC4AMC7 463 aa16.21■□□□□ 0.19
AC009088.3-201ENST00000563605 TBL1XO60907 577 aa16.21■□□□□ 0.19
AC009088.3-201ENST00000563605 TRUB2O95900 331 aaKnown RBP16.21■□□□□ 0.19
AC009088.3-201ENST00000563605 IGLV3-27P01718 113 aa16.21■□□□□ 0.19
AC009088.3-201ENST00000563605 HOXB2P14652 356 aa16.21■□□□□ 0.19
AC009088.3-201ENST00000563605 ZNF18P17022 549 aa16.21■□□□□ 0.19
AC009088.3-201ENST00000563605 SLC6A4P31645 630 aa16.21■□□□□ 0.19
AC009088.3-201ENST00000563605 GBP1P32455 592 aa16.21■□□□□ 0.19
AC009088.3-201ENST00000563605 SGSHP51688 502 aa16.21■□□□□ 0.19
AC009088.3-201ENST00000563605 SNX16P57768 344 aa16.21■□□□□ 0.19
AC009088.3-201ENST00000563605 CDK17Q00537 523 aa16.21■□□□□ 0.19
AC009088.3-201ENST00000563605 RING1Q06587 406 aa16.21■□□□□ 0.19
AC009088.3-201ENST00000563605 SPEM2Q0P670 501 aa16.21■□□□□ 0.19
AC009088.3-201ENST00000563605 HSF5Q4G112 596 aaPredicted RBP16.21■□□□□ 0.19
AC009088.3-201ENST00000563605 PTPN20Q4JDL3 420 aa16.21■□□□□ 0.19
AC009088.3-201ENST00000563605 USP39Q53GS9 565 aaKnown RBP16.21■□□□□ 0.19
AC009088.3-201ENST00000563605 CACNA2D4Q7Z3S7 1137 aa16.21■□□□□ 0.19
AC009088.3-201ENST00000563605 MDGA1Q8NFP4 955 aa16.21■□□□□ 0.19
AC009088.3-201ENST00000563605 NEK11Q8NG66 645 aa16.21■□□□□ 0.19
AC009088.3-201ENST00000563605 KCNV2Q8TDN2 545 aa16.21■□□□□ 0.19
AC009088.3-201ENST00000563605 RNF34Q969K3 372 aa16.21■□□□□ 0.19
AC009088.3-201ENST00000563605 SPAG5Q96R06 1193 aa16.21■□□□□ 0.19
AC009088.3-201ENST00000563605 CIPCQ9C0C6 399 aa16.21■□□□□ 0.19
AC009088.3-201ENST00000563605 FAM204AQ9H8W3 233 aa16.21■□□□□ 0.19
AC009088.3-201ENST00000563605 STOML2Q9UJZ1 356 aa16.21■□□□□ 0.19
AC009088.3-201ENST00000563605 USP18Q9UMW8 372 aa16.21■□□□□ 0.19
AC009088.3-201ENST00000563605 TLR6Q9Y2C9 796 aa16.21■□□□□ 0.19
AC009088.3-201ENST00000563605 SIK3Q9Y2K2 1263 aa16.21■□□□□ 0.19
AC009088.3-201ENST00000563605 STARD13Q9Y3M8 1113 aa16.21■□□□□ 0.19
AC009088.3-201ENST00000563605 RAD54BQ9Y620 910 aa16.21■□□□□ 0.19
AC009088.3-201ENST00000563605 SYCE3A1L190 88 aa16.2■□□□□ 0.18
AC009088.3-201ENST00000563605 SMTNL1A8MU46 457 aa16.2■□□□□ 0.18
AC009088.3-201ENST00000563605 LATS1O95835 1130 aa16.2■□□□□ 0.18
AC009088.3-201ENST00000563605 RETP07949 1114 aa16.2■□□□□ 0.18
AC009088.3-201ENST00000563605 MMEP08473 750 aa16.2■□□□□ 0.18
AC009088.3-201ENST00000563605 HOXD9P28356 352 aaPredicted RBP16.2■□□□□ 0.18
AC009088.3-201ENST00000563605 SLC6A3Q01959 620 aa16.2■□□□□ 0.18
AC009088.3-201ENST00000563605 ARID5AQ03989 594 aa16.2■□□□□ 0.18
AC009088.3-201ENST00000563605 SKOR2Q2VWA4 1001 aaPredicted RBP16.2■□□□□ 0.18
AC009088.3-201ENST00000563605 C2CD6Q53TS8 623 aa16.2■□□□□ 0.18
AC009088.3-201ENST00000563605 FAM133BQ5BKY9 247 aaKnown RBP16.2■□□□□ 0.18
AC009088.3-201ENST00000563605 NADSYN1Q6IA69 706 aa16.2■□□□□ 0.18
AC009088.3-201ENST00000563605 BEND5Q7L4P6 421 aa16.2■□□□□ 0.18
AC009088.3-201ENST00000563605 ERICH1Q86X53 443 aa16.2■□□□□ 0.18
AC009088.3-201ENST00000563605 CFAP52Q8N1V2 620 aa16.2■□□□□ 0.18
AC009088.3-201ENST00000563605 SLC20A1Q8WUM9 679 aa16.2■□□□□ 0.18
AC009088.3-201ENST00000563605 RLN3Q8WXF3 142 aa16.2■□□□□ 0.18
AC009088.3-201ENST00000563605 CPA5Q8WXQ8 436 aa16.2■□□□□ 0.18
AC009088.3-201ENST00000563605 SORCS1Q8WY21 1168 aa16.2■□□□□ 0.18
AC009088.3-201ENST00000563605 DDX1Q92499 740 aaKnown RBP16.2■□□□□ 0.18
AC009088.3-201ENST00000563605 SLC39A13Q96H72 371 aa16.2■□□□□ 0.18
AC009088.3-201ENST00000563605 SLC2A11Q9BYW1 496 aa16.2■□□□□ 0.18
AC009088.3-201ENST00000563605 XPO7Q9UIA9 1087 aaKnown RBP16.2■□□□□ 0.18
AC009088.3-201ENST00000563605 SLC27A6Q9Y2P4 619 aa16.2■□□□□ 0.18
AC009088.3-201ENST00000563605 LRRC10BA6NIK2 292 aa16.19■□□□□ 0.18
AC009088.3-201ENST00000563605 GOLGA8SH3BPF8 625 aa16.19■□□□□ 0.18
AC009088.3-201ENST00000563605 HSF2BPO75031 334 aa16.19■□□□□ 0.18
AC009088.3-201ENST00000563605 APOEP02649 317 aa16.19■□□□□ 0.18
AC009088.3-201ENST00000563605 SOX5P35711 763 aa16.19■□□□□ 0.18
AC009088.3-201ENST00000563605 STAT1P42224 750 aa16.19■□□□□ 0.18
AC009088.3-201ENST00000563605 ZNF165P49910 485 aa16.19■□□□□ 0.18
AC009088.3-201ENST00000563605 NME3Q13232 169 aa16.19■□□□□ 0.18
AC009088.3-201ENST00000563605 CCDC6Q16204 474 aa16.19■□□□□ 0.18
AC009088.3-201ENST00000563605 PIK3R6Q5UE93 754 aa16.19■□□□□ 0.18
AC009088.3-201ENST00000563605 NAA35Q5VZE5 725 aa16.19■□□□□ 0.18
AC009088.3-201ENST00000563605 SMYD5Q6GMV2 418 aa16.19■□□□□ 0.18
AC009088.3-201ENST00000563605 OLFML1Q6UWY5 402 aa16.19■□□□□ 0.18
AC009088.3-201ENST00000563605 ANKS1BQ7Z6G8 1248 aa16.19■□□□□ 0.18
AC009088.3-201ENST00000563605 PHLDB2Q86SQ0 1253 aa16.19■□□□□ 0.18
AC009088.3-201ENST00000563605 RASSF3Q86WH2 238 aa16.19■□□□□ 0.18
AC009088.3-201ENST00000563605 DHX40Q8IX18 779 aaKnown RBP16.19■□□□□ 0.18
AC009088.3-201ENST00000563605 UCMAQ8WVF2 138 aa16.19■□□□□ 0.18
AC009088.3-201ENST00000563605 AZIN2Q96A70 460 aa16.19■□□□□ 0.18
AC009088.3-201ENST00000563605 C18orf8Q96DM3 657 aa16.19■□□□□ 0.18
AC009088.3-201ENST00000563605 MYEOVQ96EZ4 313 aa16.19■□□□□ 0.18
AC009088.3-201ENST00000563605 DDX50Q9BQ39 737 aaKnown RBP16.19■□□□□ 0.18
AC009088.3-201ENST00000563605 NUCKS1Q9H1E3 243 aaKnown RBP16.19■□□□□ 0.18
AC009088.3-201ENST00000563605 ABCB8Q9NUT2 735 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms