RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 ZC3H12AQ5D1E8 599 aaKnown RBP8.89□□□□□ -0.99
UBR1-204ENST00000563239 ARTNQ5T4W7 220 aa8.89□□□□□ -0.99
UBR1-204ENST00000563239 SFMBT2Q5VUG0 894 aa8.89□□□□□ -0.99
UBR1-204ENST00000563239 RNF43Q68DV7 783 aa8.89□□□□□ -0.99
UBR1-204ENST00000563239 TOGARAM2Q6ZUX3 1019 aa8.89□□□□□ -0.99
UBR1-204ENST00000563239 MON1BQ7L1V2 547 aa8.89□□□□□ -0.99
UBR1-204ENST00000563239 ARCQ7LC44 396 aa8.89□□□□□ -0.99
UBR1-204ENST00000563239 PHLDB2Q86SQ0 1253 aa8.89□□□□□ -0.99
UBR1-204ENST00000563239 DNAAF5Q86Y56 855 aa8.89□□□□□ -0.99
UBR1-204ENST00000563239 SYNPOQ8N3V7 929 aa8.89□□□□□ -0.99
UBR1-204ENST00000563239 SYN2Q92777 582 aaPredicted RBP8.89□□□□□ -0.99
UBR1-204ENST00000563239 SERPINB11Q96P15 392 aa8.89□□□□□ -0.99
UBR1-204ENST00000563239 PNKPQ96T60 521 aa8.89□□□□□ -0.99
UBR1-204ENST00000563239 NPY6RQ99463 290 aa8.89□□□□□ -0.99
UBR1-204ENST00000563239 C11orf70Q9BRQ4 267 aa8.89□□□□□ -0.99
UBR1-204ENST00000563239 TRIM62Q9BVG3 475 aa8.89□□□□□ -0.99
UBR1-204ENST00000563239 NUP58Q9BVL2 599 aa8.89□□□□□ -0.99
UBR1-204ENST00000563239 BBS2Q9BXC9 721 aa8.89□□□□□ -0.99
UBR1-204ENST00000563239 HAUS4Q9H6D7 363 aa8.89□□□□□ -0.99
UBR1-204ENST00000563239 SYNCQ9H7C4 482 aa8.89□□□□□ -0.99
UBR1-204ENST00000563239 ANLNQ9NQW6 1124 aa8.89□□□□□ -0.99
UBR1-204ENST00000563239 PRMT8Q9NR22 394 aaPredicted RBP8.89□□□□□ -0.99
UBR1-204ENST00000563239 POLR3BQ9NW08 1133 aaPredicted RBP8.89□□□□□ -0.99
UBR1-204ENST00000563239 SPATA6Q9NWH7 488 aaPredicted RBP8.89□□□□□ -0.99
UBR1-204ENST00000563239 PLK2Q9NYY3 685 aa8.89□□□□□ -0.99
UBR1-204ENST00000563239 WDR35Q9P2L0 1181 aa8.89□□□□□ -0.99
UBR1-204ENST00000563239 CACNA1HO95180 2353 aa8.88□□□□□ -0.99
UBR1-204ENST00000563239 CHURC1-FNTBB4DL54 471 aa8.88□□□□□ -0.99
UBR1-204ENST00000563239 H0Y858 1186 aa8.88□□□□□ -0.99
UBR1-204ENST00000563239 GOLGA8SH3BPF8 625 aa8.88□□□□□ -0.99
UBR1-204ENST00000563239 ACSL4O60488 711 aa8.88□□□□□ -0.99
UBR1-204ENST00000563239 TSPAN3O60637 253 aa8.88□□□□□ -0.99
UBR1-204ENST00000563239 RNF40O75150 1001 aa8.88□□□□□ -0.99
UBR1-204ENST00000563239 KAT7O95251 611 aa8.88□□□□□ -0.99
UBR1-204ENST00000563239 CCDC172P0C7W6 258 aa8.88□□□□□ -0.99
UBR1-204ENST00000563239 NOS2P35228 1153 aa8.88□□□□□ -0.99
UBR1-204ENST00000563239 CHKAP35790 457 aa8.88□□□□□ -0.99
UBR1-204ENST00000563239 GSCP56915 257 aaPredicted RBP8.88□□□□□ -0.99
UBR1-204ENST00000563239 RNASE9P60153 205 aaKnown RBP8.88□□□□□ -0.99
UBR1-204ENST00000563239 ZBED6P86452 979 aa8.88□□□□□ -0.99
UBR1-204ENST00000563239 CDK17Q00537 523 aa8.88□□□□□ -0.99
UBR1-204ENST00000563239 SATB1Q01826 763 aa8.88□□□□□ -0.99
UBR1-204ENST00000563239 KDSRQ06136 332 aa8.88□□□□□ -0.99
UBR1-204ENST00000563239 RAB6CQ53S08 254 aa8.88□□□□□ -0.99
UBR1-204ENST00000563239 PPP1R15BQ5SWA1 713 aa8.88□□□□□ -0.99
UBR1-204ENST00000563239 ADGRF1Q5T601 910 aa8.88□□□□□ -0.99
UBR1-204ENST00000563239 FAM102AQ5T9C2 384 aaPredicted RBP8.88□□□□□ -0.99
UBR1-204ENST00000563239 EMC10Q5UCC4 262 aa8.88□□□□□ -0.99
UBR1-204ENST00000563239 NUGGCQ68CJ6 796 aa8.88□□□□□ -0.99
UBR1-204ENST00000563239 ACAD10Q6JQN1 1059 aa8.88□□□□□ -0.99
UBR1-204ENST00000563239 RFWD3Q6PCD5 774 aa8.88□□□□□ -0.99
UBR1-204ENST00000563239 SARM1Q6SZW1 724 aa8.88□□□□□ -0.99
UBR1-204ENST00000563239 VSTM4Q8IW00 320 aa8.88□□□□□ -0.99
UBR1-204ENST00000563239 UNC45BQ8IWX7 931 aa8.88□□□□□ -0.99
UBR1-204ENST00000563239 SPEM1Q8N4L4 309 aa8.88□□□□□ -0.99
UBR1-204ENST00000563239 JOSD2Q8TAC2 188 aa8.88□□□□□ -0.99
UBR1-204ENST00000563239 CPLX3Q8WVH0 158 aa8.88□□□□□ -0.99
UBR1-204ENST00000563239 BHMTQ93088 406 aa8.88□□□□□ -0.99
UBR1-204ENST00000563239 PGAP3Q96FM1 320 aaPredicted RBP8.88□□□□□ -0.99
UBR1-204ENST00000563239 PRICKLE1Q96MT3 831 aaPredicted RBP8.88□□□□□ -0.99
UBR1-204ENST00000563239 PRRX2Q99811 253 aa8.88□□□□□ -0.99
UBR1-204ENST00000563239 PRMT1Q99873 361 aaKnown RBP8.88□□□□□ -0.99
UBR1-204ENST00000563239 RAB6CQ9H0N0 254 aa8.88□□□□□ -0.99
UBR1-204ENST00000563239 ARHGEF4Q9NR80 690 aa8.88□□□□□ -0.99
UBR1-204ENST00000563239 PIGVQ9NUD9 493 aa8.88□□□□□ -0.99
UBR1-204ENST00000563239 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.88□□□□□ -0.99
UBR1-204ENST00000563239 ADAM22Q9P0K1 906 aa8.88□□□□□ -0.99
UBR1-204ENST00000563239 DEC1Q9P2X7 70 aa8.88□□□□□ -0.99
UBR1-204ENST00000563239 CACNA1BQ00975 2339 aa8.88□□□□□ -0.99
UBR1-204ENST00000563239 CACNA1IQ9P0X4 2223 aa8.88□□□□□ -0.99
UBR1-204ENST00000563239 C2CD4BA6NLJ0 364 aa8.87□□□□□ -0.99
UBR1-204ENST00000563239 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.87□□□□□ -0.99
UBR1-204ENST00000563239 PRRT4C9JH25 899 aa8.87□□□□□ -0.99
UBR1-204ENST00000563239 K7ESF4 209 aa8.87□□□□□ -0.99
UBR1-204ENST00000563239 M0QYT0 321 aa8.87□□□□□ -0.99
UBR1-204ENST00000563239 CBFA2T2O43439 604 aa8.87□□□□□ -0.99
UBR1-204ENST00000563239 ENDOD1O94919 500 aa8.87□□□□□ -0.99
UBR1-204ENST00000563239 PAPSS2O95340 614 aaPredicted RBP8.87□□□□□ -0.99
UBR1-204ENST00000563239 PLEKP08567 350 aaPredicted RBP8.87□□□□□ -0.99
UBR1-204ENST00000563239 SP9P0CG40 484 aa8.87□□□□□ -0.99
UBR1-204ENST00000563239 TNFAIP3P21580 790 aa8.87□□□□□ -0.99
UBR1-204ENST00000563239 HOXD9P28356 352 aaPredicted RBP8.87□□□□□ -0.99
UBR1-204ENST00000563239 HNRNPH3P31942 346 aaKnown RBP8.87□□□□□ -0.99
UBR1-204ENST00000563239 CASP14P31944 242 aa8.87□□□□□ -0.99
UBR1-204ENST00000563239 RFC1P35251 1148 aaPredicted RBP8.87□□□□□ -0.99
UBR1-204ENST00000563239 GRIA2P42262 883 aa8.87□□□□□ -0.99
UBR1-204ENST00000563239 TNFRSF4P43489 277 aa8.87□□□□□ -0.99
UBR1-204ENST00000563239 KIR2DL1P43626 348 aaPredicted RBP8.87□□□□□ -0.99
UBR1-204ENST00000563239 NSFP46459 744 aaKnown RBP8.87□□□□□ -0.99
UBR1-204ENST00000563239 SLC11A2P49281 568 aa8.87□□□□□ -0.99
UBR1-204ENST00000563239 CXCR3P49682 368 aa8.87□□□□□ -0.99
UBR1-204ENST00000563239 ATXN1P54253 815 aaKnown RBP8.87□□□□□ -0.99
UBR1-204ENST00000563239 NHLH1Q02575 133 aa8.87□□□□□ -0.99
UBR1-204ENST00000563239 KLHL30Q0D2K2 578 aa8.87□□□□□ -0.99
UBR1-204ENST00000563239 TBX2Q13207 712 aaPredicted RBP8.87□□□□□ -0.99
UBR1-204ENST00000563239 ARID5BQ14865 1188 aa8.87□□□□□ -0.99
UBR1-204ENST00000563239 SLC25A52Q3SY17 297 aa8.87□□□□□ -0.99
UBR1-204ENST00000563239 CCDC14Q49A88 953 aa8.87□□□□□ -0.99
UBR1-204ENST00000563239 FBXO43Q4G163 708 aa8.87□□□□□ -0.99
UBR1-204ENST00000563239 MPPE1Q53F39 396 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms