RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 SLC39A13Q96H72 371 aa6.46□□□□□ -1.38
CNOT1-204ENST00000563130 POM121Q96HA1 1249 aa6.46□□□□□ -1.38
CNOT1-204ENST00000563130 AGPAT1Q99943 283 aa6.46□□□□□ -1.38
CNOT1-204ENST00000563130 TRIM62Q9BVG3 475 aa6.46□□□□□ -1.38
CNOT1-204ENST00000563130 FOXQ1Q9C009 403 aa6.46□□□□□ -1.38
CNOT1-204ENST00000563130 PDCL3Q9H2J4 239 aa6.46□□□□□ -1.38
CNOT1-204ENST00000563130 MFSD1Q9H3U5 465 aa6.46□□□□□ -1.38
CNOT1-204ENST00000563130 TOR4AQ9NXH8 423 aa6.46□□□□□ -1.38
CNOT1-204ENST00000563130 RASAL2Q9UJF2 1139 aa6.46□□□□□ -1.38
CNOT1-204ENST00000563130 STOML2Q9UJZ1 356 aa6.46□□□□□ -1.38
CNOT1-204ENST00000563130 STRIP2Q9ULQ0 834 aa6.46□□□□□ -1.38
CNOT1-204ENST00000563130 CAPN11Q9UMQ6 739 aa6.46□□□□□ -1.38
CNOT1-204ENST00000563130 NAALADL1Q9UQQ1 740 aa6.46□□□□□ -1.38
CNOT1-204ENST00000563130 SLC12A8A0AV02 714 aa6.45□□□□□ -1.38
CNOT1-204ENST00000563130 GFRA2O00451 464 aa6.45□□□□□ -1.38
CNOT1-204ENST00000563130 AP5Z1O43299 807 aa6.45□□□□□ -1.38
CNOT1-204ENST00000563130 HSF2BPO75031 334 aa6.45□□□□□ -1.38
CNOT1-204ENST00000563130 TPM3P06753 285 aa6.45□□□□□ -1.38
CNOT1-204ENST00000563130 CHRNB1P11230 501 aa6.45□□□□□ -1.38
CNOT1-204ENST00000563130 NCAM1P13591 858 aa6.45□□□□□ -1.38
CNOT1-204ENST00000563130 KPNA1P52294 538 aaPredicted RBP6.45□□□□□ -1.38
CNOT1-204ENST00000563130 GSCP56915 257 aaPredicted RBP6.45□□□□□ -1.38
CNOT1-204ENST00000563130 RING1Q06587 406 aa6.45□□□□□ -1.38
CNOT1-204ENST00000563130 CCINQ13939 588 aa6.45□□□□□ -1.38
CNOT1-204ENST00000563130 TMEM196Q5HYL7 178 aa6.45□□□□□ -1.38
CNOT1-204ENST00000563130 SFMBT2Q5VUG0 894 aa6.45□□□□□ -1.38
CNOT1-204ENST00000563130 NAA35Q5VZE5 725 aa6.45□□□□□ -1.38
CNOT1-204ENST00000563130 HGSNATQ68CP4 663 aa6.45□□□□□ -1.38
CNOT1-204ENST00000563130 TOGARAM2Q6ZUX3 1019 aa6.45□□□□□ -1.38
CNOT1-204ENST00000563130 ARCQ7LC44 396 aa6.45□□□□□ -1.38
CNOT1-204ENST00000563130 ERICH1Q86X53 443 aa6.45□□□□□ -1.38
CNOT1-204ENST00000563130 PHF13Q86YI8 300 aaPredicted RBP6.45□□□□□ -1.38
CNOT1-204ENST00000563130 SUGP1Q8IWZ8 645 aaKnown RBP6.45□□□□□ -1.38
CNOT1-204ENST00000563130 TTC16Q8NEE8 873 aa6.45□□□□□ -1.38
CNOT1-204ENST00000563130 TTC8Q8TAM2 541 aa6.45□□□□□ -1.38
CNOT1-204ENST00000563130 GOLGA1Q92805 767 aa6.45□□□□□ -1.38
CNOT1-204ENST00000563130 NT5C3BQ969T7 300 aa6.45□□□□□ -1.38
CNOT1-204ENST00000563130 P2RY11Q96G91 374 aa6.45□□□□□ -1.38
CNOT1-204ENST00000563130 NUCKS1Q9H1E3 243 aaKnown RBP6.45□□□□□ -1.38
CNOT1-204ENST00000563130 RBSNQ9H1K0 784 aa6.45□□□□□ -1.38
CNOT1-204ENST00000563130 SPHK2Q9NRA0 654 aa6.45□□□□□ -1.38
CNOT1-204ENST00000563130 MARK1Q9P0L2 795 aa6.45□□□□□ -1.38
CNOT1-204ENST00000563130 TMEM59LQ9UK28 342 aa6.45□□□□□ -1.38
CNOT1-204ENST00000563130 LSM7Q9UK45 103 aaKnown RBP6.45□□□□□ -1.38
CNOT1-204ENST00000563130 AGO1Q9UL18 857 aaKnown RBP6.45□□□□□ -1.38
CNOT1-204ENST00000563130 ZNF510Q9Y2H8 683 aa6.45□□□□□ -1.38
CNOT1-204ENST00000563130 MRPS17Q9Y2R5 130 aaKnown RBP6.45□□□□□ -1.38
CNOT1-204ENST00000563130 SIT1Q9Y3P8 196 aa6.45□□□□□ -1.38
CNOT1-204ENST00000563130 FAM170BA6NMN3 283 aa6.45□□□□□ -1.38
CNOT1-204ENST00000563130 HOXC11O43248 304 aaPredicted RBP6.45□□□□□ -1.38
CNOT1-204ENST00000563130 MSI1O43347 362 aaKnown RBP6.45□□□□□ -1.38
CNOT1-204ENST00000563130 CBFA2T2O43439 604 aa6.45□□□□□ -1.38
CNOT1-204ENST00000563130 LATS1O95835 1130 aa6.45□□□□□ -1.38
CNOT1-204ENST00000563130 TRUB2O95900 331 aaKnown RBP6.45□□□□□ -1.38
CNOT1-204ENST00000563130 IRF1P10914 325 aa6.45□□□□□ -1.38
CNOT1-204ENST00000563130 CORO1AP31146 461 aaKnown RBP6.45□□□□□ -1.38
CNOT1-204ENST00000563130 HNRNPH3P31942 346 aaKnown RBP6.45□□□□□ -1.38
CNOT1-204ENST00000563130 OPRD1P41143 372 aa6.45□□□□□ -1.38
CNOT1-204ENST00000563130 EIF2DP41214 584 aaKnown RBP6.45□□□□□ -1.38
CNOT1-204ENST00000563130 RPS9P46781 194 aaKnown RBP6.45□□□□□ -1.38
CNOT1-204ENST00000563130 PITX1P78337 314 aaPredicted RBP6.45□□□□□ -1.38
CNOT1-204ENST00000563130 ZBED6P86452 979 aa6.45□□□□□ -1.38
CNOT1-204ENST00000563130 AMPD2Q01433 879 aa6.45□□□□□ -1.38
CNOT1-204ENST00000563130 NR1H3Q13133 447 aa6.45□□□□□ -1.38
CNOT1-204ENST00000563130 ARID5BQ14865 1188 aa6.45□□□□□ -1.38
CNOT1-204ENST00000563130 CLEC16AQ2KHT3 1053 aa6.45□□□□□ -1.38
CNOT1-204ENST00000563130 C2CD6Q53TS8 623 aa6.45□□□□□ -1.38
CNOT1-204ENST00000563130 LY6G5CQ5SRR4 150 aa6.45□□□□□ -1.38
CNOT1-204ENST00000563130 NAIF1Q69YI7 327 aaPredicted RBP6.45□□□□□ -1.38
CNOT1-204ENST00000563130 SPECC1LQ69YQ0 1117 aa6.45□□□□□ -1.38
CNOT1-204ENST00000563130 OR6B2Q6IFH4 312 aa6.45□□□□□ -1.38
CNOT1-204ENST00000563130 ZNF571Q7Z3V5 609 aaPredicted RBP6.45□□□□□ -1.38
CNOT1-204ENST00000563130 TAC4Q86UU9 113 aa6.45□□□□□ -1.38
CNOT1-204ENST00000563130 VSTM4Q8IW00 320 aa6.45□□□□□ -1.38
CNOT1-204ENST00000563130 ETFBKMTQ8IXQ9 262 aa6.45□□□□□ -1.38
CNOT1-204ENST00000563130 DEFB106AQ8N104 65 aa6.45□□□□□ -1.38
CNOT1-204ENST00000563130 CPXM2Q8N436 756 aa6.45□□□□□ -1.38
CNOT1-204ENST00000563130 EZH1Q92800 747 aaPredicted RBP6.45□□□□□ -1.38
CNOT1-204ENST00000563130 AZIN2Q96A70 460 aa6.45□□□□□ -1.38
CNOT1-204ENST00000563130 FCRL2Q96LA5 508 aaPredicted RBP6.45□□□□□ -1.38
CNOT1-204ENST00000563130 SERPINB11Q96P15 392 aa6.45□□□□□ -1.38
CNOT1-204ENST00000563130 DCLK3Q9C098 648 aa6.45□□□□□ -1.38
CNOT1-204ENST00000563130 HAUS4Q9H6D7 363 aa6.45□□□□□ -1.38
CNOT1-204ENST00000563130 FBRSL1Q9HCM7 1045 aaKnown RBP6.45□□□□□ -1.38
CNOT1-204ENST00000563130 PRM3Q9NNZ6 103 aa6.45□□□□□ -1.38
CNOT1-204ENST00000563130 TLR6Q9Y2C9 796 aa6.45□□□□□ -1.38
CNOT1-204ENST00000563130 KMT2EQ8IZD2 1858 aa6.44□□□□□ -1.38
CNOT1-204ENST00000563130 A0A0A0MRY4 1105 aa6.44□□□□□ -1.38
CNOT1-204ENST00000563130 TCRBV5S1A1TA0A578 114 aa6.44□□□□□ -1.38
CNOT1-204ENST00000563130 CAPN9O14815 690 aa6.44□□□□□ -1.38
CNOT1-204ENST00000563130 IRAK2O43187 625 aa6.44□□□□□ -1.38
CNOT1-204ENST00000563130 DAB1O75553 588 aa6.44□□□□□ -1.38
CNOT1-204ENST00000563130 GRAP2O75791 330 aa6.44□□□□□ -1.38
CNOT1-204ENST00000563130 ADH1CP00326 375 aa6.44□□□□□ -1.38
CNOT1-204ENST00000563130 HMBSP08397 361 aa6.44□□□□□ -1.38
CNOT1-204ENST00000563130 GZMAP12544 262 aa6.44□□□□□ -1.38
CNOT1-204ENST00000563130 CASP14P31944 242 aa6.44□□□□□ -1.38
CNOT1-204ENST00000563130 NOS2P35228 1153 aa6.44□□□□□ -1.38
CNOT1-204ENST00000563130 CHKAP35790 457 aa6.44□□□□□ -1.38
CNOT1-204ENST00000563130 MATKP42679 507 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms