RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 NLRP9Q7RTR0 991 aa7.78□□□□□ -1.16
TCF4-216ENST00000562680 CASP10Q92851 521 aa7.78□□□□□ -1.16
TCF4-216ENST00000562680 MRGBPQ9NV56 204 aa7.78□□□□□ -1.16
TCF4-216ENST00000562680 WDR70Q9NW82 654 aa7.78□□□□□ -1.16
TCF4-216ENST00000562680 SMARCAL1Q9NZC9 954 aa7.78□□□□□ -1.16
TCF4-216ENST00000562680 MARCH2Q9P0N8 246 aa7.78□□□□□ -1.16
TCF4-216ENST00000562680 MYH4Q9Y623 1939 aa7.78□□□□□ -1.16
TCF4-216ENST00000562680 CCDC189A1A4V9 331 aa7.78□□□□□ -1.16
TCF4-216ENST00000562680 H0Y626 953 aa7.78□□□□□ -1.16
TCF4-216ENST00000562680 H0YC42 278 aa7.78□□□□□ -1.16
TCF4-216ENST00000562680 NEMP1O14524 444 aa7.78□□□□□ -1.16
TCF4-216ENST00000562680 SNRPAP09012 282 aaKnown RBP7.78□□□□□ -1.16
TCF4-216ENST00000562680 ZNF865P0CJ78 1059 aaPredicted RBP7.78□□□□□ -1.16
TCF4-216ENST00000562680 CNTFP26441 200 aa7.78□□□□□ -1.16
TCF4-216ENST00000562680 TNFRSF8P28908 595 aa7.78□□□□□ -1.16
TCF4-216ENST00000562680 RFC1P35251 1148 aaPredicted RBP7.78□□□□□ -1.16
TCF4-216ENST00000562680 ATP5C1P36542 298 aaKnown RBP7.78□□□□□ -1.16
TCF4-216ENST00000562680 GLUD2P49448 558 aa7.78□□□□□ -1.16
TCF4-216ENST00000562680 TPD52P55327 224 aaPredicted RBP7.78□□□□□ -1.16
TCF4-216ENST00000562680 LILRA4P59901 499 aa7.78□□□□□ -1.16
TCF4-216ENST00000562680 PPM1LQ5SGD2 360 aa7.78□□□□□ -1.16
TCF4-216ENST00000562680 HECTD3Q5T447 861 aa7.78□□□□□ -1.16
TCF4-216ENST00000562680 ILDR2Q71H61 639 aa7.78□□□□□ -1.16
TCF4-216ENST00000562680 METTL3Q86U44 580 aaKnown RBP7.78□□□□□ -1.16
TCF4-216ENST00000562680 SKA2Q8WVK7 121 aaPredicted RBP7.78□□□□□ -1.16
TCF4-216ENST00000562680 CASKIN2Q8WXE0 1202 aa7.78□□□□□ -1.16
TCF4-216ENST00000562680 LRRC40Q9H9A6 602 aa7.78□□□□□ -1.16
TCF4-216ENST00000562680 PAPOLBQ9NRJ5 636 aaKnown RBP7.78□□□□□ -1.16
TCF4-216ENST00000562680 TAS2R14Q9NYV8 317 aa7.78□□□□□ -1.16
TCF4-216ENST00000562680 NOCTQ9UK39 431 aaKnown RBP7.78□□□□□ -1.16
TCF4-216ENST00000562680 CARD8Q9Y2G2 431 aa7.78□□□□□ -1.16
TCF4-216ENST00000562680 SLC30A1Q9Y6M5 507 aa7.78□□□□□ -1.16
TCF4-216ENST00000562680 SDR42E2A6NKP2 422 aa7.78□□□□□ -1.16
TCF4-216ENST00000562680 CFAP99D6REC4 459 aa7.78□□□□□ -1.16
TCF4-216ENST00000562680 ATP9BO43861 1147 aa7.78□□□□□ -1.16
TCF4-216ENST00000562680 RAMP2O60895 175 aa7.78□□□□□ -1.16
TCF4-216ENST00000562680 HSPA9P38646 679 aaKnown RBP7.78□□□□□ -1.16
TCF4-216ENST00000562680 PTPN9P43378 593 aa7.78□□□□□ -1.16
TCF4-216ENST00000562680 RAD23BP54727 409 aa7.78□□□□□ -1.16
TCF4-216ENST00000562680 TUBA1BP68363 451 aa7.78□□□□□ -1.16
TCF4-216ENST00000562680 ZBTB41Q5SVQ8 909 aa7.78□□□□□ -1.16
TCF4-216ENST00000562680 TUBA1AQ71U36 451 aa7.78□□□□□ -1.16
TCF4-216ENST00000562680 ECHDC2Q86YB7 292 aa7.78□□□□□ -1.16
TCF4-216ENST00000562680 TMEM175Q9BSA9 504 aa7.78□□□□□ -1.16
TCF4-216ENST00000562680 TRIM54Q9BYV2 358 aa7.78□□□□□ -1.16
TCF4-216ENST00000562680 TRIM55Q9BYV6 548 aa7.78□□□□□ -1.16
TCF4-216ENST00000562680 VRTNQ9H8Y1 702 aa7.78□□□□□ -1.16
TCF4-216ENST00000562680 SMYD2Q9NRG4 433 aa7.78□□□□□ -1.16
TCF4-216ENST00000562680 RNF186Q9NXI6 227 aa7.78□□□□□ -1.16
TCF4-216ENST00000562680 PCYOX1Q9UHG3 505 aa7.78□□□□□ -1.16
TCF4-216ENST00000562680 STXBP5LQ9Y2K9 1186 aa7.78□□□□□ -1.16
TCF4-216ENST00000562680 REXO2Q9Y3B8 237 aaKnown RBP7.78□□□□□ -1.16
TCF4-216ENST00000562680 SOCS7O14512 581 aa7.77□□□□□ -1.16
TCF4-216ENST00000562680 DNALI1O14645 258 aaPredicted RBP7.77□□□□□ -1.16
TCF4-216ENST00000562680 FSCN2O14926 492 aa7.77□□□□□ -1.16
TCF4-216ENST00000562680 AHCYL1O43865 530 aa7.77□□□□□ -1.16
TCF4-216ENST00000562680 AARS2Q5JTZ9 985 aaKnown RBP7.77□□□□□ -1.16
TCF4-216ENST00000562680 TBC1D1Q86TI0 1168 aaPredicted RBP7.77□□□□□ -1.16
TCF4-216ENST00000562680 SERINC5Q86VE9 423 aa7.77□□□□□ -1.16
TCF4-216ENST00000562680 FAM228AQ86W67 206 aa7.77□□□□□ -1.16
TCF4-216ENST00000562680 PEX5LQ8IYB4 626 aa7.77□□□□□ -1.16
TCF4-216ENST00000562680 GANCQ8TET4 914 aa7.77□□□□□ -1.16
TCF4-216ENST00000562680 ATP6V1E2Q96A05 226 aa7.77□□□□□ -1.16
TCF4-216ENST00000562680 LENG1Q96BZ8 264 aaPredicted RBP7.77□□□□□ -1.16
TCF4-216ENST00000562680 HDAC11Q96DB2 347 aa7.77□□□□□ -1.16
TCF4-216ENST00000562680 C9orf72Q96LT7 481 aa7.77□□□□□ -1.16
TCF4-216ENST00000562680 FGD4Q96M96 766 aa7.77□□□□□ -1.16
TCF4-216ENST00000562680 NR1H4Q96RI1 486 aaPredicted RBP7.77□□□□□ -1.16
TCF4-216ENST00000562680 MRPL45Q9BRJ2 306 aaKnown RBP7.77□□□□□ -1.16
TCF4-216ENST00000562680 IKZF4Q9H2S9 585 aa7.77□□□□□ -1.16
TCF4-216ENST00000562680 GPATCH2LQ9NWQ4 482 aa7.77□□□□□ -1.16
TCF4-216ENST00000562680 MSRAQ9UJ68 235 aa7.77□□□□□ -1.16
TCF4-216ENST00000562680 ADAM28Q9UKQ2 775 aa7.77□□□□□ -1.16
TCF4-216ENST00000562680 MKL2Q9ULH7 1088 aa7.77□□□□□ -1.16
TCF4-216ENST00000562680 ZNF711Q9Y462 761 aa7.77□□□□□ -1.16
TCF4-216ENST00000562680 DNM1LO00429 736 aa7.77□□□□□ -1.17
TCF4-216ENST00000562680 CST3P01034 146 aaPredicted RBP7.77□□□□□ -1.17
TCF4-216ENST00000562680 RARAP10276 462 aa7.77□□□□□ -1.17
TCF4-216ENST00000562680 TSHRP16473 764 aa7.77□□□□□ -1.17
TCF4-216ENST00000562680 HSP90AA5PQ58FG0 334 aa7.77□□□□□ -1.17
TCF4-216ENST00000562680 MON1BQ7L1V2 547 aa7.77□□□□□ -1.17
TCF4-216ENST00000562680 MTBPQ96DY7 904 aa7.77□□□□□ -1.17
TCF4-216ENST00000562680 SRPK1Q96SB4 655 aaKnown RBP7.77□□□□□ -1.17
TCF4-216ENST00000562680 PRKD2Q9BZL6 878 aa7.77□□□□□ -1.17
TCF4-216ENST00000562680 TRABDQ9H4I3 376 aa7.77□□□□□ -1.17
TCF4-216ENST00000562680 LRRC19Q9H756 370 aa7.77□□□□□ -1.17
TCF4-216ENST00000562680 SLC24A2Q9UI40 661 aa7.77□□□□□ -1.17
TCF4-216ENST00000562680 ABHD14A-ACY1A0A1B0GW23 586 aa7.77□□□□□ -1.17
TCF4-216ENST00000562680 PYGLP06737 847 aa7.77□□□□□ -1.17
TCF4-216ENST00000562680 IRF1P10914 325 aa7.77□□□□□ -1.17
TCF4-216ENST00000562680 ATP4AP20648 1035 aa7.77□□□□□ -1.17
TCF4-216ENST00000562680 TMED10P49755 219 aaKnown RBP7.77□□□□□ -1.17
TCF4-216ENST00000562680 NAA30Q147X3 362 aaPredicted RBP7.77□□□□□ -1.17
TCF4-216ENST00000562680 PTPN20Q4JDL3 420 aa7.77□□□□□ -1.17
TCF4-216ENST00000562680 PPP1R26Q5T8A7 1209 aaPredicted RBP7.77□□□□□ -1.17
TCF4-216ENST00000562680 FAAH2Q6GMR7 532 aa7.77□□□□□ -1.17
TCF4-216ENST00000562680 PARP9Q8IXQ6 854 aa7.77□□□□□ -1.17
TCF4-216ENST00000562680 TEX9Q8N6V9 391 aa7.77□□□□□ -1.17
TCF4-216ENST00000562680 EZH1Q92800 747 aaPredicted RBP7.77□□□□□ -1.17
TCF4-216ENST00000562680 AGAP3Q96P47 875 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms