RNA–Protein interactions for RNA: ENST00000562425.1

PKD1-226, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 608 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-226ENST00000562425 FBXO4Q9UKT5 387 aa17.07■□□□□ 0.32
PKD1-226ENST00000562425 STAP1Q9ULZ2 295 aa17.07■□□□□ 0.32
PKD1-226ENST00000562425 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.07■□□□□ 0.32
PKD1-226ENST00000562425 IRAK2O43187 625 aa17.06■□□□□ 0.32
PKD1-226ENST00000562425 CACNG3O60359 315 aa17.06■□□□□ 0.32
PKD1-226ENST00000562425 ACSL4O60488 711 aa17.06■□□□□ 0.32
PKD1-226ENST00000562425 KAT7O95251 611 aa17.06■□□□□ 0.32
PKD1-226ENST00000562425 CALB1P05937 261 aa17.06■□□□□ 0.32
PKD1-226ENST00000562425 UNGP13051 313 aaPredicted RBP17.06■□□□□ 0.32
PKD1-226ENST00000562425 MATKP42679 507 aa17.06■□□□□ 0.32
PKD1-226ENST00000562425 TNFRSF4P43489 277 aa17.06■□□□□ 0.32
PKD1-226ENST00000562425 CXCL12P48061 93 aa17.06■□□□□ 0.32
PKD1-226ENST00000562425 RNASE9P60153 205 aaKnown RBP17.06■□□□□ 0.32
PKD1-226ENST00000562425 CENPCQ03188 943 aa17.06■□□□□ 0.32
PKD1-226ENST00000562425 NAIF1Q69YI7 327 aaPredicted RBP17.06■□□□□ 0.32
PKD1-226ENST00000562425 GRAMD4Q6IC98 578 aa17.06■□□□□ 0.32
PKD1-226ENST00000562425 MMS22LQ6ZRQ5 1243 aa17.06■□□□□ 0.32
PKD1-226ENST00000562425 ARCQ7LC44 396 aa17.06■□□□□ 0.32
PKD1-226ENST00000562425 ETFBKMTQ8IXQ9 262 aa17.06■□□□□ 0.32
PKD1-226ENST00000562425 FAM217AQ8IXS0 508 aa17.06■□□□□ 0.32
PKD1-226ENST00000562425 ADAM32Q8TC27 787 aa17.06■□□□□ 0.32
PKD1-226ENST00000562425 RNF34Q969K3 372 aa17.06■□□□□ 0.32
PKD1-226ENST00000562425 SLC39A13Q96H72 371 aa17.06■□□□□ 0.32
PKD1-226ENST00000562425 FCRL2Q96LA5 508 aaPredicted RBP17.06■□□□□ 0.32
PKD1-226ENST00000562425 PCDHB18PQ96TA0 734 aa17.06■□□□□ 0.32
PKD1-226ENST00000562425 DNAJC17Q9NVM6 304 aaKnown RBP17.06■□□□□ 0.32
PKD1-226ENST00000562425 DDIT4Q9NX09 232 aa17.06■□□□□ 0.32
PKD1-226ENST00000562425 LUC7L2Q9Y383 392 aaKnown RBP17.06■□□□□ 0.32
PKD1-226ENST00000562425 GPR179Q6PRD1 2367 aa17.06■□□□□ 0.32
PKD1-226ENST00000562425 A0A0A0MRY4 1105 aa17.05■□□□□ 0.32
PKD1-226ENST00000562425 TBC1D3BA6NDS4 549 aa17.05■□□□□ 0.32
PKD1-226ENST00000562425 GOLGA8SH3BPF8 625 aa17.05■□□□□ 0.32
PKD1-226ENST00000562425 RNF40O75150 1001 aa17.05■□□□□ 0.32
PKD1-226ENST00000562425 PENKP01210 267 aaPredicted RBP17.05■□□□□ 0.32
PKD1-226ENST00000562425 IGLV3-25P01717 112 aa17.05■□□□□ 0.32
PKD1-226ENST00000562425 SP9P0CG40 484 aa17.05■□□□□ 0.32
PKD1-226ENST00000562425 PRKCIP41743 596 aa17.05■□□□□ 0.32
PKD1-226ENST00000562425 ZBED6P86452 979 aa17.05■□□□□ 0.32
PKD1-226ENST00000562425 KLHL30Q0D2K2 578 aa17.05■□□□□ 0.32
PKD1-226ENST00000562425 SND1Q7KZF4 910 aaKnown RBP eCLIP17.05■□□□□ 0.32
PKD1-226ENST00000562425 C12orf40Q86WS4 652 aa17.05■□□□□ 0.32
PKD1-226ENST00000562425 PHF13Q86YI8 300 aaPredicted RBP17.05■□□□□ 0.32
PKD1-226ENST00000562425 ATP6V0D2Q8N8Y2 350 aa17.05■□□□□ 0.32
PKD1-226ENST00000562425 SLC30A5Q8TAD4 765 aa17.05■□□□□ 0.32
PKD1-226ENST00000562425 DDI1Q8WTU0 396 aa17.05■□□□□ 0.32
PKD1-226ENST00000562425 SYN2Q92777 582 aaPredicted RBP17.05■□□□□ 0.32
PKD1-226ENST00000562425 TMA16Q96EY4 203 aaKnown RBP17.05■□□□□ 0.32
PKD1-226ENST00000562425 SLC2A11Q9BYW1 496 aa17.05■□□□□ 0.32
PKD1-226ENST00000562425 ADAM22Q9P0K1 906 aa17.05■□□□□ 0.32
PKD1-226ENST00000562425 CAPN11Q9UMQ6 739 aa17.05■□□□□ 0.32
PKD1-226ENST00000562425 PAXBP1Q9Y5B6 917 aa17.05■□□□□ 0.32
PKD1-226ENST00000562425 BZW2Q9Y6E2 419 aaKnown RBP17.05■□□□□ 0.32
PKD1-226ENST00000562425 R4GN57 208 aa17.05■□□□□ 0.32
PKD1-226ENST00000562425 ITIH6Q6UXX5 1313 aa17.04■□□□□ 0.32
PKD1-226ENST00000562425 TYW5A2RUC4 315 aaKnown RBP17.04■□□□□ 0.32
PKD1-226ENST00000562425 CHURC1-FNTBB4DL54 471 aa17.04■□□□□ 0.32
PKD1-226ENST00000562425 M0QYT0 321 aa17.04■□□□□ 0.32
PKD1-226ENST00000562425 F9P00740 461 aa17.04■□□□□ 0.32
PKD1-226ENST00000562425 ABCB4P21439 1286 aa17.04■□□□□ 0.32
PKD1-226ENST00000562425 CCR1P32246 355 aa17.04■□□□□ 0.32
PKD1-226ENST00000562425 DGKGP49619 791 aa17.04■□□□□ 0.32
PKD1-226ENST00000562425 CSTF1Q05048 431 aaKnown RBP17.04■□□□□ 0.32
PKD1-226ENST00000562425 KDSRQ06136 332 aa17.04■□□□□ 0.32
PKD1-226ENST00000562425 ZNF528Q3MIS6 628 aa17.04■□□□□ 0.32
PKD1-226ENST00000562425 C2CD6Q53TS8 623 aa17.04■□□□□ 0.32
PKD1-226ENST00000562425 ZC3H12AQ5D1E8 599 aaKnown RBP17.04■□□□□ 0.32
PKD1-226ENST00000562425 FYB2Q5VWT5 728 aa17.04■□□□□ 0.32
PKD1-226ENST00000562425 Q6ZS52 159 aa17.04■□□□□ 0.32
PKD1-226ENST00000562425 CPLX3Q8WVH0 158 aa17.04■□□□□ 0.32
PKD1-226ENST00000562425 RUBCNQ92622 972 aa17.04■□□□□ 0.32
PKD1-226ENST00000562425 BHMTQ93088 406 aa17.04■□□□□ 0.32
PKD1-226ENST00000562425 ACDQ96AP0 544 aa17.04■□□□□ 0.32
PKD1-226ENST00000562425 BTN2A3PQ96KV6 586 aa17.04■□□□□ 0.32
PKD1-226ENST00000562425 C11orf70Q9BRQ4 267 aa17.04■□□□□ 0.32
PKD1-226ENST00000562425 HAUS4Q9H6D7 363 aa17.04■□□□□ 0.32
PKD1-226ENST00000562425 PLK2Q9NYY3 685 aa17.04■□□□□ 0.32
PKD1-226ENST00000562425 NCOR2Q9Y618 2525 aa17.03■□□□□ 0.32
PKD1-226ENST00000562425 FAM170AA1A519 330 aa17.03■□□□□ 0.32
PKD1-226ENST00000562425 K7EQS6 105 aa17.03■□□□□ 0.32
PKD1-226ENST00000562425 TSPAN3O60637 253 aa17.03■□□□□ 0.32
PKD1-226ENST00000562425 MOCS2O96007 188 aaPredicted RBP17.03■□□□□ 0.32
PKD1-226ENST00000562425 MRPS21P82921 87 aaKnown RBP17.03■□□□□ 0.32
PKD1-226ENST00000562425 C1QBPQ07021 282 aaKnown RBP17.03■□□□□ 0.32
PKD1-226ENST00000562425 NME3Q13232 169 aa17.03■□□□□ 0.32
PKD1-226ENST00000562425 EIF4EBP2Q13542 120 aaPredicted RBP17.03■□□□□ 0.32
PKD1-226ENST00000562425 TRIM14Q14142 442 aa17.03■□□□□ 0.32
PKD1-226ENST00000562425 GAS6Q14393 721 aa17.03■□□□□ 0.32
PKD1-226ENST00000562425 E2F5Q15329 346 aa17.03■□□□□ 0.32
PKD1-226ENST00000562425 SLC25A52Q3SY17 297 aa17.03■□□□□ 0.32
PKD1-226ENST00000562425 HSF5Q4G112 596 aaPredicted RBP17.03■□□□□ 0.32
PKD1-226ENST00000562425 MPP7Q5T2T1 576 aa17.03■□□□□ 0.32
PKD1-226ENST00000562425 SPECC1LQ69YQ0 1117 aa17.03■□□□□ 0.32
PKD1-226ENST00000562425 ACAD10Q6JQN1 1059 aa17.03■□□□□ 0.32
PKD1-226ENST00000562425 VPS36Q86VN1 386 aa17.03■□□□□ 0.32
PKD1-226ENST00000562425 ZNF557Q8N988 423 aaPredicted RBP17.03■□□□□ 0.32
PKD1-226ENST00000562425 TERB1Q8NA31 727 aa17.03■□□□□ 0.32
PKD1-226ENST00000562425 KCNV2Q8TDN2 545 aa17.03■□□□□ 0.32
PKD1-226ENST00000562425 EZH1Q92800 747 aaPredicted RBP17.03■□□□□ 0.32
PKD1-226ENST00000562425 RMDN1Q96DB5 314 aa17.03■□□□□ 0.32
PKD1-226ENST00000562425 VCPIP1Q96JH7 1222 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms