RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 PRKD1Q15139 912 aaPredicted RBP10.14□□□□□ -0.79
SMG1-205ENST00000561947 KBTBD12Q3ZCT8 623 aa10.14□□□□□ -0.79
SMG1-205ENST00000561947 LACTB2Q53H82 288 aaPredicted RBP10.14□□□□□ -0.79
SMG1-205ENST00000561947 INTS6LQ5JSJ4 861 aaKnown RBP10.14□□□□□ -0.79
SMG1-205ENST00000561947 FAM171BQ6P995 826 aa10.14□□□□□ -0.79
SMG1-205ENST00000561947 CD300LGQ6UXG3 332 aa10.14□□□□□ -0.79
SMG1-205ENST00000561947 PAXIP1Q6ZW49 1069 aaPredicted RBP10.14□□□□□ -0.79
SMG1-205ENST00000561947 ZNF534Q76KX8 674 aa10.14□□□□□ -0.79
SMG1-205ENST00000561947 SLC44A1Q8WWI5 657 aa10.14□□□□□ -0.79
SMG1-205ENST00000561947 HHIPL1Q96JK4 782 aa10.14□□□□□ -0.79
SMG1-205ENST00000561947 SPATA13Q96N96 652 aa10.14□□□□□ -0.79
SMG1-205ENST00000561947 ACBD6Q9BR61 282 aa10.14□□□□□ -0.79
SMG1-205ENST00000561947 CSNK1G1Q9HCP0 422 aa10.14□□□□□ -0.79
SMG1-205ENST00000561947 WDR6Q9NNW5 1121 aaKnown RBP10.14□□□□□ -0.79
SMG1-205ENST00000561947 RRN3Q9NYV6 651 aa10.14□□□□□ -0.79
SMG1-205ENST00000561947 ZC3H7BQ9UGR2 993 aaKnown RBP10.14□□□□□ -0.79
SMG1-205ENST00000561947 NLRC5Q86WI3 1866 aa10.14□□□□□ -0.79
SMG1-205ENST00000561947 IQANK1A0A1B0GTG1 560 aa10.13□□□□□ -0.79
SMG1-205ENST00000561947 M0QZQ0 153 aa10.13□□□□□ -0.79
SMG1-205ENST00000561947 EEF2KO00418 725 aaKnown RBP10.13□□□□□ -0.79
SMG1-205ENST00000561947 ZWINTO95229 277 aa10.13□□□□□ -0.79
SMG1-205ENST00000561947 GSTA2P09210 222 aa10.13□□□□□ -0.79
SMG1-205ENST00000561947 SKIP12755 728 aa10.13□□□□□ -0.79
SMG1-205ENST00000561947 PAX3P23760 479 aa10.13□□□□□ -0.79
SMG1-205ENST00000561947 ADRA1BP35368 520 aa10.13□□□□□ -0.79
SMG1-205ENST00000561947 FDFT1P37268 417 aa10.13□□□□□ -0.79
SMG1-205ENST00000561947 ACTN3Q08043 901 aaPredicted RBP10.13□□□□□ -0.79
SMG1-205ENST00000561947 TUSC3Q13454 348 aa10.13□□□□□ -0.79
SMG1-205ENST00000561947 ITGA7Q13683 1181 aa10.13□□□□□ -0.79
SMG1-205ENST00000561947 PDK1Q15118 436 aa10.13□□□□□ -0.79
SMG1-205ENST00000561947 ZKSCAN8Q15776 578 aaPredicted RBP10.13□□□□□ -0.79
SMG1-205ENST00000561947 PAN2Q504Q3 1202 aaKnown RBP10.13□□□□□ -0.79
SMG1-205ENST00000561947 ANKRD20A2Q5SQ80 823 aa10.13□□□□□ -0.79
SMG1-205ENST00000561947 ANKRD20A1Q5TYW2 823 aa10.13□□□□□ -0.79
SMG1-205ENST00000561947 ANKRD20A3Q5VUR7 823 aa10.13□□□□□ -0.79
SMG1-205ENST00000561947 RGS9BPQ6ZS82 235 aa10.13□□□□□ -0.79
SMG1-205ENST00000561947 RFX8Q6ZV50 586 aa10.13□□□□□ -0.79
SMG1-205ENST00000561947 BHLHA9Q7RTU4 235 aa10.13□□□□□ -0.79
SMG1-205ENST00000561947 ALKBH8Q96BT7 664 aaKnown RBP10.13□□□□□ -0.79
SMG1-205ENST00000561947 PGAP3Q96FM1 320 aaPredicted RBP10.13□□□□□ -0.79
SMG1-205ENST00000561947 UROC1Q96N76 676 aa10.13□□□□□ -0.79
SMG1-205ENST00000561947 LGMNQ99538 433 aa10.13□□□□□ -0.79
SMG1-205ENST00000561947 RHOBTB2Q9BYZ6 727 aa10.13□□□□□ -0.79
SMG1-205ENST00000561947 XAB2Q9HCS7 855 aaKnown RBP10.13□□□□□ -0.79
SMG1-205ENST00000561947 TRMT13Q9NUP7 481 aaKnown RBP10.13□□□□□ -0.79
SMG1-205ENST00000561947 DSEQ9UL01 958 aa10.13□□□□□ -0.79
SMG1-205ENST00000561947 NOD1Q9Y239 953 aa10.13□□□□□ -0.79
SMG1-205ENST00000561947 INPP5FQ9Y2H2 1132 aa10.13□□□□□ -0.79
SMG1-205ENST00000561947 IKBKGQ9Y6K9 419 aa10.13□□□□□ -0.79
SMG1-205ENST00000561947 CAPN7Q9Y6W3 813 aa10.13□□□□□ -0.79
SMG1-205ENST00000561947 TRDMT1O14717 391 aaKnown RBP10.13□□□□□ -0.79
SMG1-205ENST00000561947 DCLK1O15075 740 aa10.13□□□□□ -0.79
SMG1-205ENST00000561947 STK10O94804 968 aaKnown RBP10.13□□□□□ -0.79
SMG1-205ENST00000561947 SUN1O94901 812 aa10.13□□□□□ -0.79
SMG1-205ENST00000561947 C1QAP02745 245 aa10.13□□□□□ -0.79
SMG1-205ENST00000561947 INHBAP08476 426 aa10.13□□□□□ -0.79
SMG1-205ENST00000561947 NCAM1P13591 858 aa10.13□□□□□ -0.79
SMG1-205ENST00000561947 GLUD2P49448 558 aa10.13□□□□□ -0.79
SMG1-205ENST00000561947 MTFR1Q15390 333 aa10.13□□□□□ -0.79
SMG1-205ENST00000561947 SLC1A5Q15758 541 aa10.13□□□□□ -0.79
SMG1-205ENST00000561947 SPRED3Q2MJR0 410 aa10.13□□□□□ -0.79
SMG1-205ENST00000561947 DENND5BQ6ZUT9 1274 aa10.13□□□□□ -0.79
SMG1-205ENST00000561947 SPATA21Q7Z572 469 aa10.13□□□□□ -0.79
SMG1-205ENST00000561947 CTU1Q7Z7A3 348 aaKnown RBP10.13□□□□□ -0.79
SMG1-205ENST00000561947 PRPF39Q86UA1 669 aaKnown RBP10.13□□□□□ -0.79
SMG1-205ENST00000561947 ADAM32Q8TC27 787 aa10.13□□□□□ -0.79
SMG1-205ENST00000561947 IRGQQ8WZA9 623 aa10.13□□□□□ -0.79
SMG1-205ENST00000561947 PLAC1Q9HBJ0 212 aa10.13□□□□□ -0.79
SMG1-205ENST00000561947 RNF186Q9NXI6 227 aa10.13□□□□□ -0.79
SMG1-205ENST00000561947 FBXW11Q9UKB1 542 aa10.13□□□□□ -0.79
SMG1-205ENST00000561947 GRID1Q9ULK0 1009 aa10.13□□□□□ -0.79
SMG1-205ENST00000561947 PPP1R12AO14974 1030 aaPredicted RBP10.12□□□□□ -0.79
SMG1-205ENST00000561947 AP1B1Q10567 949 aa10.12□□□□□ -0.79
SMG1-205ENST00000561947 SEMA3BQ13214 749 aa10.12□□□□□ -0.79
SMG1-205ENST00000561947 PDK4Q16654 411 aa10.12□□□□□ -0.79
SMG1-205ENST00000561947 HHATQ5VTY9 493 aa10.12□□□□□ -0.79
SMG1-205ENST00000561947 CGB2Q6NT52 195 aa10.12□□□□□ -0.79
SMG1-205ENST00000561947 ZNF598Q86UK7 904 aaKnown RBP10.12□□□□□ -0.79
SMG1-205ENST00000561947 ECHDC2Q86YB7 292 aa10.12□□□□□ -0.79
SMG1-205ENST00000561947 HASPINQ8TF76 798 aa10.12□□□□□ -0.79
SMG1-205ENST00000561947 RSPH1Q8WYR4 309 aa10.12□□□□□ -0.79
SMG1-205ENST00000561947 GRAMD1AQ96CP6 724 aa10.12□□□□□ -0.79
SMG1-205ENST00000561947 P2RY11Q96G91 374 aa10.12□□□□□ -0.79
SMG1-205ENST00000561947 SIGLEC10Q96LC7 697 aa10.12□□□□□ -0.79
SMG1-205ENST00000561947 PKMYT1Q99640 499 aa10.12□□□□□ -0.79
SMG1-205ENST00000561947 FERMT1Q9BQL6 677 aa10.12□□□□□ -0.79
SMG1-205ENST00000561947 ANLNQ9NQW6 1124 aa10.12□□□□□ -0.79
SMG1-205ENST00000561947 DDIT4Q9NX09 232 aa10.12□□□□□ -0.79
SMG1-205ENST00000561947 NR2E3Q9Y5X4 410 aa10.12□□□□□ -0.79
SMG1-205ENST00000561947 SQORQ9Y6N5 450 aa10.12□□□□□ -0.79
SMG1-205ENST00000561947 MYO18AQ92614 2054 aaKnown RBP10.12□□□□□ -0.79
SMG1-205ENST00000561947 FAM72CH0Y354 149 aa10.12□□□□□ -0.79
SMG1-205ENST00000561947 RNF103O00237 685 aa10.12□□□□□ -0.79
SMG1-205ENST00000561947 DNM1LO00429 736 aa10.12□□□□□ -0.79
SMG1-205ENST00000561947 OPHN1O60890 802 aa10.12□□□□□ -0.79
SMG1-205ENST00000561947 CABYRO75952 493 aa10.12□□□□□ -0.79
SMG1-205ENST00000561947 APOEP02649 317 aa10.12□□□□□ -0.79
SMG1-205ENST00000561947 MT-ND3P03897 115 aa10.12□□□□□ -0.79
SMG1-205ENST00000561947 BDNFP23560 247 aa10.12□□□□□ -0.79
SMG1-205ENST00000561947 PRKCHP24723 683 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms