RNA–Protein interactions for RNA: ENST00000561517.5

CCDC113-203, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-203ENST00000561517 MDGA1Q8NFP4 955 aa16.11■□□□□ 0.17
CCDC113-203ENST00000561517 DDI1Q8WTU0 396 aa16.11■□□□□ 0.17
CCDC113-203ENST00000561517 DDX1Q92499 740 aaKnown RBP16.11■□□□□ 0.17
CCDC113-203ENST00000561517 POLMQ9NP87 494 aaPredicted RBP16.11■□□□□ 0.17
CCDC113-203ENST00000561517 CLEC4EQ9ULY5 219 aa16.11■□□□□ 0.17
CCDC113-203ENST00000561517 SIK3Q9Y2K2 1263 aa16.11■□□□□ 0.17
CCDC113-203ENST00000561517 DAAM1Q9Y4D1 1078 aa16.11■□□□□ 0.17
CCDC113-203ENST00000561517 LGALS16A8MUM7 142 aa16.1■□□□□ 0.17
CCDC113-203ENST00000561517 CAPN9O14815 690 aa16.1■□□□□ 0.17
CCDC113-203ENST00000561517 ACSL4O60488 711 aa16.1■□□□□ 0.17
CCDC113-203ENST00000561517 ALDH1A2O94788 518 aa16.1■□□□□ 0.17
CCDC113-203ENST00000561517 IGLV3-25P01717 112 aa16.1■□□□□ 0.17
CCDC113-203ENST00000561517 ERBB2P04626 1255 aa16.1■□□□□ 0.17
CCDC113-203ENST00000561517 TGM1P22735 817 aa16.1■□□□□ 0.17
CCDC113-203ENST00000561517 SLC11A2P49281 568 aa16.1■□□□□ 0.17
CCDC113-203ENST00000561517 KLK7P49862 253 aa16.1■□□□□ 0.17
CCDC113-203ENST00000561517 SNX16P57768 344 aa16.1■□□□□ 0.17
CCDC113-203ENST00000561517 EIF4EBP2Q13542 120 aaPredicted RBP16.1■□□□□ 0.17
CCDC113-203ENST00000561517 TAF5Q15542 800 aa16.1■□□□□ 0.17
CCDC113-203ENST00000561517 GEN1Q17RS7 908 aa16.1■□□□□ 0.17
CCDC113-203ENST00000561517 PTPN20Q4JDL3 420 aa16.1■□□□□ 0.17
CCDC113-203ENST00000561517 FAM133BQ5BKY9 247 aaKnown RBP16.1■□□□□ 0.17
CCDC113-203ENST00000561517 EFHC1Q5JVL4 640 aa16.1■□□□□ 0.17
CCDC113-203ENST00000561517 ANO7Q6IWH7 933 aa16.1■□□□□ 0.17
CCDC113-203ENST00000561517 APTXQ7Z2E3 356 aaKnown RBP16.1■□□□□ 0.17
CCDC113-203ENST00000561517 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.1■□□□□ 0.17
CCDC113-203ENST00000561517 TAC4Q86UU9 113 aa16.1■□□□□ 0.17
CCDC113-203ENST00000561517 KBTBD6Q86V97 674 aa16.1■□□□□ 0.17
CCDC113-203ENST00000561517 KIAA2013Q8IYS2 634 aa16.1■□□□□ 0.17
CCDC113-203ENST00000561517 ANKRD20A12PQ8NF67 263 aa16.1■□□□□ 0.17
CCDC113-203ENST00000561517 OLIG1Q8TAK6 271 aa16.1■□□□□ 0.17
CCDC113-203ENST00000561517 TMA16Q96EY4 203 aaKnown RBP16.1■□□□□ 0.17
CCDC113-203ENST00000561517 LOXL4Q96JB6 756 aa16.1■□□□□ 0.17
CCDC113-203ENST00000561517 ZC3H10Q96K80 434 aaKnown RBP16.1■□□□□ 0.17
CCDC113-203ENST00000561517 SLC2A13Q96QE2 648 aa16.1■□□□□ 0.17
CCDC113-203ENST00000561517 ACOX2Q99424 681 aa16.1■□□□□ 0.17
CCDC113-203ENST00000561517 GABRG3Q99928 467 aa16.1■□□□□ 0.17
CCDC113-203ENST00000561517 CD248Q9HCU0 757 aa16.1■□□□□ 0.17
CCDC113-203ENST00000561517 CEP83Q9Y592 693 aa16.1■□□□□ 0.17
CCDC113-203ENST00000561517 EPHB6O15197 1021 aa16.09■□□□□ 0.17
CCDC113-203ENST00000561517 IRAK2O43187 625 aa16.09■□□□□ 0.17
CCDC113-203ENST00000561517 TSPAN3O60637 253 aa16.09■□□□□ 0.17
CCDC113-203ENST00000561517 LRP3O75074 770 aa16.09■□□□□ 0.17
CCDC113-203ENST00000561517 TRUB2O95900 331 aaKnown RBP16.09■□□□□ 0.17
CCDC113-203ENST00000561517 SLC6A4P31645 630 aa16.09■□□□□ 0.17
CCDC113-203ENST00000561517 USP39Q53GS9 565 aaKnown RBP16.09■□□□□ 0.17
CCDC113-203ENST00000561517 MPP7Q5T2T1 576 aa16.09■□□□□ 0.17
CCDC113-203ENST00000561517 PIK3R6Q5UE93 754 aa16.09■□□□□ 0.17
CCDC113-203ENST00000561517 NADSYN1Q6IA69 706 aa16.09■□□□□ 0.17
CCDC113-203ENST00000561517 CAVIN1Q6NZI2 390 aaKnown RBP16.09■□□□□ 0.17
CCDC113-203ENST00000561517 OLFML1Q6UWY5 402 aa16.09■□□□□ 0.17
CCDC113-203ENST00000561517 FAM183BPQ6ZVS7 135 aa16.09■□□□□ 0.17
CCDC113-203ENST00000561517 ANKS1BQ7Z6G8 1248 aa16.09■□□□□ 0.17
CCDC113-203ENST00000561517 NOP9Q86U38 636 aaKnown RBP16.09■□□□□ 0.17
CCDC113-203ENST00000561517 AOPEPQ8N6M6 819 aa16.09■□□□□ 0.17
CCDC113-203ENST00000561517 TMEM35BQ8NCS4 154 aa16.09■□□□□ 0.17
CCDC113-203ENST00000561517 ZNF397Q8NF99 534 aaPredicted RBP16.09■□□□□ 0.17
CCDC113-203ENST00000561517 ADAM32Q8TC27 787 aa16.09■□□□□ 0.17
CCDC113-203ENST00000561517 IPO4Q8TEX9 1081 aaKnown RBP16.09■□□□□ 0.17
CCDC113-203ENST00000561517 BPIFA3Q9BQP9 254 aa16.09■□□□□ 0.17
CCDC113-203ENST00000561517 TPSD1Q9BZJ3 242 aa16.09■□□□□ 0.17
CCDC113-203ENST00000561517 FAM207AQ9NSI2 230 aaPredicted RBP16.09■□□□□ 0.17
CCDC113-203ENST00000561517 GOLGA6L7A0A1B0GV03 622 aa16.08■□□□□ 0.16
CCDC113-203ENST00000561517 A0A1W2PQF6 199 aa16.08■□□□□ 0.16
CCDC113-203ENST00000561517 NPC1O15118 1278 aa16.08■□□□□ 0.16
CCDC113-203ENST00000561517 HSF2BPO75031 334 aa16.08■□□□□ 0.16
CCDC113-203ENST00000561517 HOXB2P14652 356 aa16.08■□□□□ 0.16
CCDC113-203ENST00000561517 CDK11BP21127 795 aaKnown RBP16.08■□□□□ 0.16
CCDC113-203ENST00000561517 GABRB2P47870 512 aa16.08■□□□□ 0.16
CCDC113-203ENST00000561517 SGSHP51688 502 aa16.08■□□□□ 0.16
CCDC113-203ENST00000561517 JAM2P57087 298 aa16.08■□□□□ 0.16
CCDC113-203ENST00000561517 POLR2FP61218 127 aaKnown RBP16.08■□□□□ 0.16
CCDC113-203ENST00000561517 PITX1P78337 314 aaPredicted RBP16.08■□□□□ 0.16
CCDC113-203ENST00000561517 SLC6A3Q01959 620 aa16.08■□□□□ 0.16
CCDC113-203ENST00000561517 ENPP2Q13822 863 aa16.08■□□□□ 0.16
CCDC113-203ENST00000561517 EIF4HQ15056 248 aaKnown RBP16.08■□□□□ 0.16
CCDC113-203ENST00000561517 SYCP1Q15431 976 aa16.08■□□□□ 0.16
CCDC113-203ENST00000561517 PLK5Q496M5 336 aa16.08■□□□□ 0.16
CCDC113-203ENST00000561517 ANO6Q4KMQ2 910 aa16.08■□□□□ 0.16
CCDC113-203ENST00000561517 DCAF6Q58WW2 860 aa16.08■□□□□ 0.16
CCDC113-203ENST00000561517 OR6B2Q6IFH4 312 aa16.08■□□□□ 0.16
CCDC113-203ENST00000561517 SDE2Q6IQ49 451 aa16.08■□□□□ 0.16
CCDC113-203ENST00000561517 RFWD3Q6PCD5 774 aa16.08■□□□□ 0.16
CCDC113-203ENST00000561517 SLC26A9Q7LBE3 791 aa16.08■□□□□ 0.16
CCDC113-203ENST00000561517 ZDHHC17Q8IUH5 632 aa16.08■□□□□ 0.16
CCDC113-203ENST00000561517 CHPFQ8IZ52 775 aa16.08■□□□□ 0.16
CCDC113-203ENST00000561517 DEFB106AQ8N104 65 aa16.08■□□□□ 0.16
CCDC113-203ENST00000561517 EPS8L1Q8TE68 723 aa16.08■□□□□ 0.16
CCDC113-203ENST00000561517 UCMAQ8WVF2 138 aa16.08■□□□□ 0.16
CCDC113-203ENST00000561517 ERGIC2Q96RQ1 377 aa16.08■□□□□ 0.16
CCDC113-203ENST00000561517 DDX50Q9BQ39 737 aaKnown RBP16.08■□□□□ 0.16
CCDC113-203ENST00000561517 NAT10Q9H0A0 1025 aaKnown RBP16.08■□□□□ 0.16
CCDC113-203ENST00000561517 DUSP15Q9H1R2 295 aaPredicted RBP16.08■□□□□ 0.16
CCDC113-203ENST00000561517 PARD6AQ9NPB6 346 aa16.08■□□□□ 0.16
CCDC113-203ENST00000561517 THAP10Q9P2Z0 257 aaPredicted RBP16.08■□□□□ 0.16
CCDC113-203ENST00000561517 TCRBV21S2A2A0A5A6 115 aa16.07■□□□□ 0.16
CCDC113-203ENST00000561517 DCLK1O15075 740 aa16.07■□□□□ 0.16
CCDC113-203ENST00000561517 TIMM44O43615 452 aa16.07■□□□□ 0.16
CCDC113-203ENST00000561517 LSM8O95777 96 aaKnown RBP16.07■□□□□ 0.16
CCDC113-203ENST00000561517 HLA-FP30511 346 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms