RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 LAMA2P24043 3122 aaKnown RBP10.67□□□□□ -0.7
USP3-219ENST00000561326 SLC12A8A0AV02 714 aa10.67□□□□□ -0.7
USP3-219ENST00000561326 SPDYE4A6NLX3 237 aa10.67□□□□□ -0.7
USP3-219ENST00000561326 APOC4-APOC2K7ER74 178 aa10.67□□□□□ -0.7
USP3-219ENST00000561326 EEF2KO00418 725 aaKnown RBP10.67□□□□□ -0.7
USP3-219ENST00000561326 CREB3O43889 395 aa10.67□□□□□ -0.7
USP3-219ENST00000561326 XYLBO75191 536 aa10.67□□□□□ -0.7
USP3-219ENST00000561326 ZMYND10O75800 440 aa10.67□□□□□ -0.7
USP3-219ENST00000561326 APOC2P02655 101 aa10.67□□□□□ -0.7
USP3-219ENST00000561326 HNRNPA1P09651 372 aaKnown RBP eCLIP10.67□□□□□ -0.7
USP3-219ENST00000561326 PTPN2P17706 415 aa10.67□□□□□ -0.7
USP3-219ENST00000561326 IL4RP24394 825 aa10.67□□□□□ -0.7
USP3-219ENST00000561326 CDC25CP30307 473 aa10.67□□□□□ -0.7
USP3-219ENST00000561326 PGFP49763 221 aa10.67□□□□□ -0.7
USP3-219ENST00000561326 CLCN4P51793 760 aa10.67□□□□□ -0.7
USP3-219ENST00000561326 TPI1P60174 286 aa10.67□□□□□ -0.7
USP3-219ENST00000561326 DYNLT1P63172 113 aa10.67□□□□□ -0.7
USP3-219ENST00000561326 SNX1Q13596 522 aa10.67□□□□□ -0.7
USP3-219ENST00000561326 BYSLQ13895 437 aaKnown RBP10.67□□□□□ -0.7
USP3-219ENST00000561326 SIX1Q15475 284 aaPredicted RBP10.67□□□□□ -0.7
USP3-219ENST00000561326 ELF2Q15723 593 aa10.67□□□□□ -0.7
USP3-219ENST00000561326 CA9Q16790 459 aa10.67□□□□□ -0.7
USP3-219ENST00000561326 NUGGCQ68CJ6 796 aa10.67□□□□□ -0.7
USP3-219ENST00000561326 SYDE1Q6ZW31 735 aaPredicted RBP10.67□□□□□ -0.7
USP3-219ENST00000561326 GSTA5Q7RTV2 222 aa10.67□□□□□ -0.7
USP3-219ENST00000561326 MIB1Q86YT6 1006 aa10.67□□□□□ -0.7
USP3-219ENST00000561326 C1orf54Q8WWF1 131 aa10.67□□□□□ -0.7
USP3-219ENST00000561326 TSC1Q92574 1164 aa10.67□□□□□ -0.7
USP3-219ENST00000561326 MRPS31Q92665 395 aaKnown RBP10.67□□□□□ -0.7
USP3-219ENST00000561326 HAUS1Q96CS2 278 aa10.67□□□□□ -0.7
USP3-219ENST00000561326 FAF2Q96CS3 445 aa10.67□□□□□ -0.7
USP3-219ENST00000561326 BTN2A3PQ96KV6 586 aa10.67□□□□□ -0.7
USP3-219ENST00000561326 C1orf74Q96LT6 269 aa10.67□□□□□ -0.7
USP3-219ENST00000561326 CSPG4P5Q96PW8 444 aa10.67□□□□□ -0.7
USP3-219ENST00000561326 KCTD15Q96SI1 283 aaPredicted RBP10.67□□□□□ -0.7
USP3-219ENST00000561326 FERMT1Q9BQL6 677 aa10.67□□□□□ -0.7
USP3-219ENST00000561326 PBX4Q9BYU1 374 aa10.67□□□□□ -0.7
USP3-219ENST00000561326 NKX2-4Q9H2Z4 354 aa10.67□□□□□ -0.7
USP3-219ENST00000561326 TLE6Q9H808 572 aa10.67□□□□□ -0.7
USP3-219ENST00000561326 CWC15Q9P013 229 aaKnown RBP10.67□□□□□ -0.7
USP3-219ENST00000561326 AMACRQ9UHK6 382 aa10.67□□□□□ -0.7
USP3-219ENST00000561326 ZNF148Q9UQR1 794 aa10.67□□□□□ -0.7
USP3-219ENST00000561326 KCNU1A8MYU2 1149 aa10.66□□□□□ -0.7
USP3-219ENST00000561326 MCF2LO15068 1137 aa10.66□□□□□ -0.7
USP3-219ENST00000561326 RAD51CO43502 376 aa10.66□□□□□ -0.7
USP3-219ENST00000561326 CLASP2O75122 1294 aaKnown RBP10.66□□□□□ -0.7
USP3-219ENST00000561326 PAGE1O75459 146 aa10.66□□□□□ -0.7
USP3-219ENST00000561326 ERLIN1O75477 346 aa10.66□□□□□ -0.7
USP3-219ENST00000561326 ZNF189O75820 626 aaPredicted RBP10.66□□□□□ -0.7
USP3-219ENST00000561326 ARHGEF15O94989 841 aa10.66□□□□□ -0.7
USP3-219ENST00000561326 HEXIM1O94992 359 aaKnown RBP10.66□□□□□ -0.7
USP3-219ENST00000561326 CSPG5O95196 566 aa10.66□□□□□ -0.7
USP3-219ENST00000561326 ECEL1O95672 775 aa10.66□□□□□ -0.7
USP3-219ENST00000561326 TBX18O95935 607 aa10.66□□□□□ -0.7
USP3-219ENST00000561326 F11P03951 625 aa10.66□□□□□ -0.7
USP3-219ENST00000561326 PFKLP17858 780 aa10.66□□□□□ -0.7
USP3-219ENST00000561326 HOXA9P31269 272 aa10.66□□□□□ -0.7
USP3-219ENST00000561326 STIP1P31948 543 aaKnown RBP10.66□□□□□ -0.7
USP3-219ENST00000561326 PBX2P40425 430 aa10.66□□□□□ -0.7
USP3-219ENST00000561326 SLC11A2P49281 568 aa10.66□□□□□ -0.7
USP3-219ENST00000561326 HARS2P49590 506 aaKnown RBP10.66□□□□□ -0.7
USP3-219ENST00000561326 MLLT6P55198 1093 aaPredicted RBP10.66□□□□□ -0.7
USP3-219ENST00000561326 CAMK1Q14012 370 aa10.66□□□□□ -0.7
USP3-219ENST00000561326 NAA30Q147X3 362 aaPredicted RBP10.66□□□□□ -0.7
USP3-219ENST00000561326 PPP1R7Q15435 360 aa10.66□□□□□ -0.7
USP3-219ENST00000561326 SLC9A4Q6AI14 798 aa10.66□□□□□ -0.7
USP3-219ENST00000561326 LRRC31Q6UY01 552 aa10.66□□□□□ -0.7
USP3-219ENST00000561326 ANKS1BQ7Z6G8 1248 aa10.66□□□□□ -0.7
USP3-219ENST00000561326 TDHQ8IZJ6 230 aa10.66□□□□□ -0.7
USP3-219ENST00000561326 ZDHHC14Q8IZN3 488 aa10.66□□□□□ -0.7
USP3-219ENST00000561326 PYROXD2Q8N2H3 581 aa10.66□□□□□ -0.7
USP3-219ENST00000561326 PLD5Q8N7P1 536 aa10.66□□□□□ -0.7
USP3-219ENST00000561326 LEMD2Q8NC56 503 aa10.66□□□□□ -0.7
USP3-219ENST00000561326 PCDH19Q8TAB3 1148 aa10.66□□□□□ -0.7
USP3-219ENST00000561326 ACTL9Q8TC94 416 aa10.66□□□□□ -0.7
USP3-219ENST00000561326 ARNTL2Q8WYA1 636 aa10.66□□□□□ -0.7
USP3-219ENST00000561326 SLCO2A1Q92959 643 aa10.66□□□□□ -0.7
USP3-219ENST00000561326 SLC39A13Q96H72 371 aa10.66□□□□□ -0.7
USP3-219ENST00000561326 CCDC114Q96M63 670 aa10.66□□□□□ -0.7
USP3-219ENST00000561326 PARD6BQ9BYG5 372 aa10.66□□□□□ -0.7
USP3-219ENST00000561326 SIK2Q9H0K1 926 aa10.66□□□□□ -0.7
USP3-219ENST00000561326 CCSER2Q9H7U1 834 aa10.66□□□□□ -0.7
USP3-219ENST00000561326 ANKZF1Q9H8Y5 726 aa10.66□□□□□ -0.7
USP3-219ENST00000561326 ASAH2Q9NR71 780 aa10.66□□□□□ -0.7
USP3-219ENST00000561326 MTMR10Q9NXD2 777 aa10.66□□□□□ -0.7
USP3-219ENST00000561326 RAD54BQ9Y620 910 aa10.66□□□□□ -0.7
USP3-219ENST00000561326 CLUHO75153 1309 aa10.65□□□□□ -0.7
USP3-219ENST00000561326 HELZP42694 1942 aaKnown RBP10.65□□□□□ -0.7
USP3-219ENST00000561326 ATG2AQ2TAZ0 1938 aa10.65□□□□□ -0.7
USP3-219ENST00000561326 SOBPA7XYQ1 873 aa10.65□□□□□ -0.7
USP3-219ENST00000561326 NCAM2O15394 837 aa10.65□□□□□ -0.7
USP3-219ENST00000561326 FGF10O15520 208 aaPredicted RBP10.65□□□□□ -0.7
USP3-219ENST00000561326 TTI1O43156 1089 aa10.65□□□□□ -0.7
USP3-219ENST00000561326 MSI1O43347 362 aaKnown RBP10.65□□□□□ -0.7
USP3-219ENST00000561326 COCHO43405 550 aa10.65□□□□□ -0.7
USP3-219ENST00000561326 LIASO43766 372 aa10.65□□□□□ -0.7
USP3-219ENST00000561326 ITGAVP06756 1048 aa10.65□□□□□ -0.7
USP3-219ENST00000561326 GOT1P17174 413 aa10.65□□□□□ -0.7
USP3-219ENST00000561326 HDCP19113 662 aa10.65□□□□□ -0.7
USP3-219ENST00000561326 AMPD1P23109 780 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms