RNA–Protein interactions for RNA: ENST00000561235.5

TCF12-223, Transcript of transcription factor 12, human

TSL 4

Gene TCF12, Length 818 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF12-223	ENST00000561235	CINP	Q9BW66	212 aa	Predicted RBP	6.14	□□□□□ -1.43
TCF12-223	ENST00000561235	CIPC	Q9C0C6	399 aa		6.14	□□□□□ -1.43
TCF12-223	ENST00000561235	KCNK9	Q9NPC2	374 aa		6.14	□□□□□ -1.43
TCF12-223	ENST00000561235	BAZ1B	Q9UIG0	1483 aa	Known RBP	6.14	□□□□□ -1.43
TCF12-223	ENST00000561235	TMEM191C	A6NGB0	347 aa		6.13	□□□□□ -1.43
TCF12-223	ENST00000561235	FAM90A20P	A6NIJ5	464 aa		6.13	□□□□□ -1.43
TCF12-223	ENST00000561235	AGAP5	A6NIR3	686 aa		6.13	□□□□□ -1.43
TCF12-223	ENST00000561235	TISP43	B9A030	160 aa		6.13	□□□□□ -1.43
TCF12-223	ENST00000561235	NKX2-8	O15522	239 aa		6.13	□□□□□ -1.43
TCF12-223	ENST00000561235	SH3BP5	O60239	455 aa		6.13	□□□□□ -1.43
TCF12-223	ENST00000561235	APEH	P13798	732 aa	Known RBP	6.13	□□□□□ -1.43
TCF12-223	ENST00000561235	CXCR5	P32302	372 aa		6.13	□□□□□ -1.43
TCF12-223	ENST00000561235	PAPOLA	P51003	745 aa	Known RBP	6.13	□□□□□ -1.43
TCF12-223	ENST00000561235	RBM5	P52756	815 aa	Known RBP eCLIP	6.13	□□□□□ -1.43
TCF12-223	ENST00000561235	RPL15	P61313	204 aa	Known RBP	6.13	□□□□□ -1.43
TCF12-223	ENST00000561235	LRRC24	Q50LG9	513 aa		6.13	□□□□□ -1.43
TCF12-223	ENST00000561235	DENND2C	Q68D51	928 aa		6.13	□□□□□ -1.43
TCF12-223	ENST00000561235	DGAT2L7P	Q6IED9	249 aa		6.13	□□□□□ -1.43
TCF12-223	ENST00000561235	MMS22L	Q6ZRQ5	1243 aa		6.13	□□□□□ -1.43
TCF12-223	ENST00000561235	LRRTM4	Q86VH4	590 aa		6.13	□□□□□ -1.43
TCF12-223	ENST00000561235	PAF1	Q8N7H5	531 aa		6.13	□□□□□ -1.43
TCF12-223	ENST00000561235	C12orf76	Q8N812	135 aa	Predicted RBP	6.13	□□□□□ -1.43
TCF12-223	ENST00000561235	CEP70	Q8NHQ1	597 aa		6.13	□□□□□ -1.43
TCF12-223	ENST00000561235	ASB12	Q8WXK4	309 aa		6.13	□□□□□ -1.43
TCF12-223	ENST00000561235	FAR2	Q96K12	515 aa		6.13	□□□□□ -1.43
TCF12-223	ENST00000561235	SNX18	Q96RF0	628 aa		6.13	□□□□□ -1.43
TCF12-223	ENST00000561235	ELOVL1	Q9BW60	279 aa		6.13	□□□□□ -1.43
TCF12-223	ENST00000561235	TOR3A	Q9H497	397 aa		6.13	□□□□□ -1.43
TCF12-223	ENST00000561235	ABHD10	Q9NUJ1	306 aa		6.13	□□□□□ -1.43
TCF12-223	ENST00000561235	SLC12A4	Q9UP95	1085 aa		6.13	□□□□□ -1.43
TCF12-223	ENST00000561235	PCDHA10	Q9Y5I2	948 aa		6.13	□□□□□ -1.43
TCF12-223	ENST00000561235	GCOM1	H8Y6P7	765 aa	Predicted RBP	6.12	□□□□□ -1.43
TCF12-223	ENST00000561235	FOXN1	O15353	648 aa		6.12	□□□□□ -1.43
TCF12-223	ENST00000561235	HEXIM1	O94992	359 aa	Known RBP	6.12	□□□□□ -1.43
TCF12-223	ENST00000561235	CDK7	P50613	346 aa		6.12	□□□□□ -1.43
TCF12-223	ENST00000561235	SMARCA4	P51532	1647 aa		6.12	□□□□□ -1.43
TCF12-223	ENST00000561235	JAK3	P52333	1124 aa		6.12	□□□□□ -1.43
TCF12-223	ENST00000561235	SLC12A1	Q13621	1099 aa		6.12	□□□□□ -1.43
TCF12-223	ENST00000561235	SMAD1	Q15797	465 aa	Known RBP	6.12	□□□□□ -1.43
TCF12-223	ENST00000561235	FAM153C	Q494X1	144 aa		6.12	□□□□□ -1.43
TCF12-223	ENST00000561235	SLC29A4	Q7RTT9	530 aa		6.12	□□□□□ -1.43
TCF12-223	ENST00000561235	BCDIN3D	Q7Z5W3	292 aa	Known RBP	6.12	□□□□□ -1.43
TCF12-223	ENST00000561235	GGN	Q86UU5	652 aa		6.12	□□□□□ -1.43
TCF12-223	ENST00000561235	TMEM57	Q8N5G2	664 aa		6.12	□□□□□ -1.43
TCF12-223	ENST00000561235	TERB1	Q8NA31	727 aa		6.12	□□□□□ -1.43
TCF12-223	ENST00000561235	OR52L2P	Q8NGH6	319 aa		6.12	□□□□□ -1.43
TCF12-223	ENST00000561235	MAFA	Q8NHW3	353 aa	Predicted RBP	6.12	□□□□□ -1.43
TCF12-223	ENST00000561235	SLC9A6	Q92581	669 aa		6.12	□□□□□ -1.43
TCF12-223	ENST00000561235	USP13	Q92995	863 aa	Predicted RBP	6.12	□□□□□ -1.43
TCF12-223	ENST00000561235	SDCCAG3	Q96C92	435 aa		6.12	□□□□□ -1.43
TCF12-223	ENST00000561235	TRMT61A	Q96FX7	289 aa	Known RBP	6.12	□□□□□ -1.43
TCF12-223	ENST00000561235	CDCP1	Q9H5V8	836 aa		6.12	□□□□□ -1.43
TCF12-223	ENST00000561235	ALG13	Q9NP73	1137 aa	Known RBP	6.12	□□□□□ -1.43
TCF12-223	ENST00000561235	ASIC5	Q9NY37	505 aa		6.12	□□□□□ -1.43
TCF12-223	ENST00000561235	CEP164	Q9UPV0	1460 aa		6.12	□□□□□ -1.43
TCF12-223	ENST00000561235	RCE1	Q9Y256	329 aa		6.12	□□□□□ -1.43
TCF12-223	ENST00000561235	HECW2	Q9P2P5	1572 aa		6.11	□□□□□ -1.43
TCF12-223	ENST00000561235	TBC1D3D	A0A087WVF3	549 aa		6.11	□□□□□ -1.43
TCF12-223	ENST00000561235	TBC1D3I	A0A087WXS9	549 aa		6.11	□□□□□ -1.43
TCF12-223	ENST00000561235	TBC1D3E	A0A087X179	549 aa		6.11	□□□□□ -1.43
TCF12-223	ENST00000561235	TBC1D3K	A0A087X1G2	549 aa		6.11	□□□□□ -1.43
TCF12-223	ENST00000561235	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	6.11	□□□□□ -1.43
TCF12-223	ENST00000561235	TBC1D3B	A6NDS4	549 aa		6.11	□□□□□ -1.43
TCF12-223	ENST00000561235	TBC1D3F	A6NER0	549 aa	Predicted RBP	6.11	□□□□□ -1.43
TCF12-223	ENST00000561235	TBC1D3L	B9A6J9	549 aa		6.11	□□□□□ -1.43
TCF12-223	ENST00000561235	EYA2	O00167	538 aa		6.11	□□□□□ -1.43
TCF12-223	ENST00000561235	FYB1	O15117	783 aa		6.11	□□□□□ -1.43
TCF12-223	ENST00000561235	C1R	P00736	705 aa		6.11	□□□□□ -1.43
TCF12-223	ENST00000561235	GC	P02774	474 aa		6.11	□□□□□ -1.43
TCF12-223	ENST00000561235	HNRNPC	P07910	306 aa	Known RBP eCLIP	6.11	□□□□□ -1.43
TCF12-223	ENST00000561235	TBC1D3H	P0C7X1	549 aa		6.11	□□□□□ -1.43
TCF12-223	ENST00000561235	GRK5	P34947	590 aa		6.11	□□□□□ -1.43
TCF12-223	ENST00000561235	TAS2R50	P59544	299 aa		6.11	□□□□□ -1.43
TCF12-223	ENST00000561235	RBM6	P78332	1123 aa	Known RBP	6.11	□□□□□ -1.43
TCF12-223	ENST00000561235	CFHR3	Q02985	330 aa		6.11	□□□□□ -1.43
TCF12-223	ENST00000561235	GAB1	Q13480	694 aa		6.11	□□□□□ -1.43
TCF12-223	ENST00000561235	CBFB	Q13951	182 aa		6.11	□□□□□ -1.43
TCF12-223	ENST00000561235	TBC1D3G	Q6DHY5	549 aa		6.11	□□□□□ -1.43
TCF12-223	ENST00000561235	TBC1D3C	Q6IPX1	549 aa		6.11	□□□□□ -1.43
TCF12-223	ENST00000561235	CCDC70	Q6NSX1	233 aa		6.11	□□□□□ -1.43
TCF12-223	ENST00000561235	KYAT3	Q6YP21	454 aa	Known RBP	6.11	□□□□□ -1.43
TCF12-223	ENST00000561235	RASGRP2	Q7LDG7	609 aa		6.11	□□□□□ -1.43
TCF12-223	ENST00000561235	ANKS1B	Q7Z6G8	1248 aa		6.11	□□□□□ -1.43
TCF12-223	ENST00000561235	TBC1D3	Q8IZP1	549 aa	Predicted RBP	6.11	□□□□□ -1.43
TCF12-223	ENST00000561235	LINC01465	Q8N7H1	131 aa		6.11	□□□□□ -1.43
TCF12-223	ENST00000561235	CLEC4C	Q8WTT0	213 aa		6.11	□□□□□ -1.43
TCF12-223	ENST00000561235	HERVK_113	Q902F9	699 aa		6.11	□□□□□ -1.43
TCF12-223	ENST00000561235	TBC1D5	Q92609	795 aa		6.11	□□□□□ -1.43
TCF12-223	ENST00000561235	KAZALD1	Q96I82	304 aa		6.11	□□□□□ -1.43
TCF12-223	ENST00000561235	TBATA	Q96M53	351 aa		6.11	□□□□□ -1.43
TCF12-223	ENST00000561235	NAP1L4	Q99733	375 aa	Known RBP	6.11	□□□□□ -1.43
TCF12-223	ENST00000561235	PRRX2	Q99811	253 aa		6.11	□□□□□ -1.43
TCF12-223	ENST00000561235	ARHGAP39	Q9C0H5	1083 aa		6.11	□□□□□ -1.43
TCF12-223	ENST00000561235	RMI1	Q9H9A7	625 aa		6.11	□□□□□ -1.43
TCF12-223	ENST00000561235	ASB6	Q9NWX5	421 aa		6.11	□□□□□ -1.43
TCF12-223	ENST00000561235	IFT80	Q9P2H3	777 aa	Predicted RBP	6.11	□□□□□ -1.43
TCF12-223	ENST00000561235	ADAM21	Q9UKJ8	722 aa		6.11	□□□□□ -1.43
TCF12-223	ENST00000561235	PACSIN3	Q9UKS6	424 aa		6.11	□□□□□ -1.43
TCF12-223	ENST00000561235	FZD4	Q9ULV1	537 aa		6.11	□□□□□ -1.43
TCF12-223	ENST00000561235	STX16-NPEPL1	H3BU86	382 aa		6.1	□□□□□ -1.43

Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms