RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 PDIA2Q13087 525 aaKnown RBP14.42□□□□□ -0.1
RABGGTA-220ENST00000560998 SPOCD1Q6ZMY3 1216 aa14.42□□□□□ -0.1
RABGGTA-220ENST00000560998 RFX8Q6ZV50 586 aa14.42□□□□□ -0.1
RABGGTA-220ENST00000560998 GSTA5Q7RTV2 222 aa14.42□□□□□ -0.1
RABGGTA-220ENST00000560998 SIKE1Q9BRV8 207 aa14.42□□□□□ -0.1
RABGGTA-220ENST00000560998 YIPF2Q9BWQ6 316 aa14.42□□□□□ -0.1
RABGGTA-220ENST00000560998 OXCT2Q9BYC2 517 aaPredicted RBP14.42□□□□□ -0.1
RABGGTA-220ENST00000560998 ASB7Q9H672 318 aa14.42□□□□□ -0.1
RABGGTA-220ENST00000560998 TMED5Q9Y3A6 229 aa14.42□□□□□ -0.1
RABGGTA-220ENST00000560998 SCN4AP35499 1836 aa14.41□□□□□ -0.1
RABGGTA-220ENST00000560998 WDR91A4D1P6 747 aa14.41□□□□□ -0.1
RABGGTA-220ENST00000560998 LIASO43766 372 aa14.41□□□□□ -0.1
RABGGTA-220ENST00000560998 SUPT3HO75486 399 aa14.41□□□□□ -0.1
RABGGTA-220ENST00000560998 PGM3O95394 542 aa14.41□□□□□ -0.1
RABGGTA-220ENST00000560998 SNAI1O95863 264 aaPredicted RBP14.41□□□□□ -0.1
RABGGTA-220ENST00000560998 VARSP26640 1264 aaKnown RBP14.41□□□□□ -0.1
RABGGTA-220ENST00000560998 POLR2BP30876 1174 aaKnown RBP14.41□□□□□ -0.1
RABGGTA-220ENST00000560998 ATICP31939 592 aa14.41□□□□□ -0.1
RABGGTA-220ENST00000560998 CPA2P48052 419 aa14.41□□□□□ -0.1
RABGGTA-220ENST00000560998 CREB5Q02930 508 aa14.41□□□□□ -0.1
RABGGTA-220ENST00000560998 KRT81Q14533 505 aa14.41□□□□□ -0.1
RABGGTA-220ENST00000560998 LPIN1Q14693 890 aa14.41□□□□□ -0.1
RABGGTA-220ENST00000560998 KYAT1Q16773 422 aa14.41□□□□□ -0.1
RABGGTA-220ENST00000560998 SLC10A6Q3KNW5 377 aa14.41□□□□□ -0.1
RABGGTA-220ENST00000560998 NADK2Q4G0N4 442 aa14.41□□□□□ -0.1
RABGGTA-220ENST00000560998 KAZNQ674X7 775 aa14.41□□□□□ -0.1
RABGGTA-220ENST00000560998 TXNRD3NBQ6F5E7 133 aa14.41□□□□□ -0.1
RABGGTA-220ENST00000560998 C3orf62Q6ZUJ4 267 aa14.41□□□□□ -0.1
RABGGTA-220ENST00000560998 CCDC80Q76M96 950 aa14.41□□□□□ -0.1
RABGGTA-220ENST00000560998 ATP11CQ8NB49 1132 aa14.41□□□□□ -0.1
RABGGTA-220ENST00000560998 SLC4A11Q8NBS3 891 aa14.41□□□□□ -0.1
RABGGTA-220ENST00000560998 APOPT1Q96IL0 206 aa14.41□□□□□ -0.1
RABGGTA-220ENST00000560998 MS4A4AQ96JQ5 239 aa14.41□□□□□ -0.1
RABGGTA-220ENST00000560998 TWNKQ96RR1 684 aa14.41□□□□□ -0.1
RABGGTA-220ENST00000560998 ELOVL4Q9GZR5 314 aa14.41□□□□□ -0.1
RABGGTA-220ENST00000560998 VRTNQ9H8Y1 702 aa14.41□□□□□ -0.1
RABGGTA-220ENST00000560998 DDX56Q9NY93 547 aaKnown RBP14.41□□□□□ -0.1
RABGGTA-220ENST00000560998 ARMCX1Q9P291 453 aa14.41□□□□□ -0.1
RABGGTA-220ENST00000560998 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.4□□□□□ -0.1
RABGGTA-220ENST00000560998 CCDC160A6NGH7 325 aa14.4□□□□□ -0.1
RABGGTA-220ENST00000560998 UNCXA6NJT0 531 aa14.4□□□□□ -0.1
RABGGTA-220ENST00000560998 GOLGA8SH3BPF8 625 aa14.4□□□□□ -0.1
RABGGTA-220ENST00000560998 LPXNO60711 386 aa14.4□□□□□ -0.1
RABGGTA-220ENST00000560998 TRMUO75648 421 aaKnown RBP14.4□□□□□ -0.1
RABGGTA-220ENST00000560998 PDE5AO76074 875 aa14.4□□□□□ -0.1
RABGGTA-220ENST00000560998 ZNF24P17028 368 aa14.4□□□□□ -0.1
RABGGTA-220ENST00000560998 FDFT1P37268 417 aa14.4□□□□□ -0.1
RABGGTA-220ENST00000560998 ETV4P43268 484 aa14.4□□□□□ -0.1
RABGGTA-220ENST00000560998 PDE1BQ01064 536 aa14.4□□□□□ -0.1
RABGGTA-220ENST00000560998 FOLH1Q04609 750 aa14.4□□□□□ -0.1
RABGGTA-220ENST00000560998 ORC1Q13415 861 aa14.4□□□□□ -0.1
RABGGTA-220ENST00000560998 PDCD4Q53EL6 469 aaKnown RBP14.4□□□□□ -0.1
RABGGTA-220ENST00000560998 ZFYVE27Q5T4F4 411 aa14.4□□□□□ -0.1
RABGGTA-220ENST00000560998 DHRS4L2Q6PKH6 230 aa14.4□□□□□ -0.1
RABGGTA-220ENST00000560998 Q6ZNX1 250 aa14.4□□□□□ -0.1
RABGGTA-220ENST00000560998 TREML1Q86YW5 311 aa14.4□□□□□ -0.1
RABGGTA-220ENST00000560998 C17orf50Q8WW18 174 aa14.4□□□□□ -0.1
RABGGTA-220ENST00000560998 BIRC8Q96P09 236 aa14.4□□□□□ -0.1
RABGGTA-220ENST00000560998 ACSS3Q9H6R3 686 aa14.4□□□□□ -0.1
RABGGTA-220ENST00000560998 CYP3A43Q9HB55 503 aa14.4□□□□□ -0.1
RABGGTA-220ENST00000560998 SLC17A7Q9P2U7 560 aa14.4□□□□□ -0.1
RABGGTA-220ENST00000560998 MORF4L1Q9UBU8 362 aa14.4□□□□□ -0.1
RABGGTA-220ENST00000560998 TJP2Q9UDY2 1190 aa14.4□□□□□ -0.1
RABGGTA-220ENST00000560998 HMGXB4Q9UGU5 601 aa14.4□□□□□ -0.1
RABGGTA-220ENST00000560998 RABGEF1Q9UJ41 708 aa14.4□□□□□ -0.1
RABGGTA-220ENST00000560998 RAB26Q9ULW5 256 aa14.4□□□□□ -0.1
RABGGTA-220ENST00000560998 hCG_1818297A0A087WSY0 165 aa14.4□□□□□ -0.1
RABGGTA-220ENST00000560998 KANSL1LA0AUZ9 987 aa14.4□□□□□ -0.1
RABGGTA-220ENST00000560998 GLTPD2A6NH11 291 aa14.4□□□□□ -0.1
RABGGTA-220ENST00000560998 H3BRB1 525 aa14.4□□□□□ -0.1
RABGGTA-220ENST00000560998 I3L4J1 428 aa14.4□□□□□ -0.1
RABGGTA-220ENST00000560998 TSPAN1O60635 241 aa14.4□□□□□ -0.1
RABGGTA-220ENST00000560998 CILPO75339 1184 aa14.4□□□□□ -0.1
RABGGTA-220ENST00000560998 CD48P09326 243 aa14.4□□□□□ -0.1
RABGGTA-220ENST00000560998 KRT3P12035 628 aa14.4□□□□□ -0.1
RABGGTA-220ENST00000560998 ATF7P17544 494 aaPredicted RBP14.4□□□□□ -0.1
RABGGTA-220ENST00000560998 RFC1P35251 1148 aaPredicted RBP14.4□□□□□ -0.1
RABGGTA-220ENST00000560998 PSMC1P62191 440 aaKnown RBP14.4□□□□□ -0.1
RABGGTA-220ENST00000560998 GSTM4Q03013 218 aa14.4□□□□□ -0.1
RABGGTA-220ENST00000560998 PTPN11Q06124 597 aaPredicted RBP14.4□□□□□ -0.1
RABGGTA-220ENST00000560998 TMEM132DQ14C87 1099 aa14.4□□□□□ -0.1
RABGGTA-220ENST00000560998 OGFRL1Q5TC84 451 aaPredicted RBP14.4□□□□□ -0.1
RABGGTA-220ENST00000560998 KLHL35Q6PF15 583 aa14.4□□□□□ -0.1
RABGGTA-220ENST00000560998 ILDR2Q71H61 639 aa14.4□□□□□ -0.1
RABGGTA-220ENST00000560998 PATL1Q86TB9 770 aaKnown RBP14.4□□□□□ -0.1
RABGGTA-220ENST00000560998 ALYREFQ86V81 257 aaKnown RBP14.4□□□□□ -0.1
RABGGTA-220ENST00000560998 TMEM126BQ8IUX1 230 aa14.4□□□□□ -0.1
RABGGTA-220ENST00000560998 ALLCQ8N6M5 410 aa14.4□□□□□ -0.1
RABGGTA-220ENST00000560998 CEP70Q8NHQ1 597 aa14.4□□□□□ -0.1
RABGGTA-220ENST00000560998 JOSD2Q8TAC2 188 aa14.4□□□□□ -0.1
RABGGTA-220ENST00000560998 NLRP7Q8WX94 980 aa14.4□□□□□ -0.1
RABGGTA-220ENST00000560998 VPS50Q96JG6 964 aa14.4□□□□□ -0.1
RABGGTA-220ENST00000560998 CCDC106Q9BWC9 280 aa14.4□□□□□ -0.1
RABGGTA-220ENST00000560998 TUT1Q9H6E5 874 aaKnown RBP14.4□□□□□ -0.1
RABGGTA-220ENST00000560998 PPARGC1AQ9UBK2 798 aaKnown RBP14.4□□□□□ -0.1
RABGGTA-220ENST00000560998 DNPEPQ9ULA0 475 aa14.4□□□□□ -0.1
RABGGTA-220ENST00000560998 A0A088AWK7 358 aa14.39□□□□□ -0.11
RABGGTA-220ENST00000560998 CCL15-CCL14A0A0B4J2E2 113 aa14.39□□□□□ -0.11
RABGGTA-220ENST00000560998 SH3PXD2BA1X283 911 aa14.39□□□□□ -0.11
RABGGTA-220ENST00000560998 TXNDC9O14530 226 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms