RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 CRADDP78560 199 aa16.98■□□□□ 0.31
TPM1-228ENST00000560975 PDE1CQ14123 709 aaPredicted RBP16.98■□□□□ 0.31
TPM1-228ENST00000560975 CDO1Q16878 200 aa16.98■□□□□ 0.31
TPM1-228ENST00000560975 BHLHE22Q8NFJ8 381 aaPredicted RBP16.98■□□□□ 0.31
TPM1-228ENST00000560975 GSDMBQ8TAX9 411 aa16.98■□□□□ 0.31
TPM1-228ENST00000560975 TMEM143Q96AN5 459 aa16.98■□□□□ 0.31
TPM1-228ENST00000560975 PEBP4Q96S96 227 aa16.98■□□□□ 0.31
TPM1-228ENST00000560975 ACSS2Q9NR19 701 aa16.98■□□□□ 0.31
TPM1-228ENST00000560975 DNAJC28Q9NX36 388 aa16.98■□□□□ 0.31
TPM1-228ENST00000560975 THEGQ9P2T0 379 aa16.98■□□□□ 0.31
TPM1-228ENST00000560975 ZNF195O14628 629 aa16.98■□□□□ 0.31
TPM1-228ENST00000560975 ZBED1O96006 694 aa16.98■□□□□ 0.31
TPM1-228ENST00000560975 JAK3P52333 1124 aa16.98■□□□□ 0.31
TPM1-228ENST00000560975 CASC4Q6P4E1 433 aa16.98■□□□□ 0.31
TPM1-228ENST00000560975 LPCAT2Q7L5N7 544 aa16.98■□□□□ 0.31
TPM1-228ENST00000560975 ADAM32Q8TC27 787 aa16.98■□□□□ 0.31
TPM1-228ENST00000560975 CGRRF1Q99675 332 aa16.98■□□□□ 0.31
TPM1-228ENST00000560975 KLC2Q9H0B6 622 aa16.98■□□□□ 0.31
TPM1-228ENST00000560975 STN1Q9H668 368 aaKnown RBP16.98■□□□□ 0.31
TPM1-228ENST00000560975 COG4Q9H9E3 785 aa16.98■□□□□ 0.31
TPM1-228ENST00000560975 RSAD1Q9HA92 442 aa16.98■□□□□ 0.31
TPM1-228ENST00000560975 GPATCH2LQ9NWQ4 482 aa16.98■□□□□ 0.31
TPM1-228ENST00000560975 STK39Q9UEW8 545 aa16.98■□□□□ 0.31
TPM1-228ENST00000560975 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.97■□□□□ 0.31
TPM1-228ENST00000560975 LRRIQ4A6NIV6 560 aa16.97■□□□□ 0.31
TPM1-228ENST00000560975 FAM159BA6NKW6 160 aa16.97■□□□□ 0.31
TPM1-228ENST00000560975 NEMP1O14524 444 aa16.97■□□□□ 0.31
TPM1-228ENST00000560975 TRUB2O95900 331 aaKnown RBP16.97■□□□□ 0.31
TPM1-228ENST00000560975 ALDOAP04075 364 aaKnown RBP16.97■□□□□ 0.31
TPM1-228ENST00000560975 TFPTP0C1Z6 253 aa16.97■□□□□ 0.31
TPM1-228ENST00000560975 C16orf72Q14CZ0 275 aa16.97■□□□□ 0.31
TPM1-228ENST00000560975 MTERF2Q49AM1 385 aa16.97■□□□□ 0.31
TPM1-228ENST00000560975 SWSAP1Q6NVH7 229 aa16.97■□□□□ 0.31
TPM1-228ENST00000560975 SNX32Q86XE0 403 aa16.97■□□□□ 0.31
TPM1-228ENST00000560975 UBR7Q8N806 425 aa16.97■□□□□ 0.31
TPM1-228ENST00000560975 CMASQ8NFW8 434 aaPredicted RBP16.97■□□□□ 0.31
TPM1-228ENST00000560975 TSPAN14Q8NG11 270 aa16.97■□□□□ 0.31
TPM1-228ENST00000560975 FOXD2O60548 495 aaPredicted RBP16.97■□□□□ 0.31
TPM1-228ENST00000560975 ZNF189O75820 626 aaPredicted RBP16.97■□□□□ 0.31
TPM1-228ENST00000560975 PDGFRBP09619 1106 aa16.97■□□□□ 0.31
TPM1-228ENST00000560975 THRAP10827 490 aa16.97■□□□□ 0.31
TPM1-228ENST00000560975 RALBP11234 206 aa16.97■□□□□ 0.31
TPM1-228ENST00000560975 HOXA10P31260 410 aaPredicted RBP16.97■□□□□ 0.31
TPM1-228ENST00000560975 ENTPD1P49961 510 aa16.97■□□□□ 0.31
TPM1-228ENST00000560975 CCR3P51677 355 aa16.97■□□□□ 0.31
TPM1-228ENST00000560975 MS4A2Q01362 244 aa16.97■□□□□ 0.31
TPM1-228ENST00000560975 MAML3Q96JK9 1138 aa16.97■□□□□ 0.31
TPM1-228ENST00000560975 CPXM1Q96SM3 734 aa16.97■□□□□ 0.31
TPM1-228ENST00000560975 RTKNQ9BST9 563 aa16.97■□□□□ 0.31
TPM1-228ENST00000560975 MTMR12Q9C0I1 747 aa16.97■□□□□ 0.31
TPM1-228ENST00000560975 DHX33Q9H6R0 707 aaKnown RBP16.97■□□□□ 0.31
TPM1-228ENST00000560975 CAAP1Q9H8G2 361 aa16.97■□□□□ 0.31
TPM1-228ENST00000560975 FBXO40Q9UH90 709 aa16.97■□□□□ 0.31
TPM1-228ENST00000560975 PAIP2BQ9ULR5 123 aaKnown RBP16.97■□□□□ 0.31
TPM1-228ENST00000560975 TCP10L2B9ZVM9 353 aa16.96■□□□□ 0.31
TPM1-228ENST00000560975 STX16-NPEPL1H3BU86 382 aa16.96■□□□□ 0.31
TPM1-228ENST00000560975 ENO3P13929 434 aaPredicted RBP16.96■□□□□ 0.31
TPM1-228ENST00000560975 PSMC3P17980 439 aa16.96■□□□□ 0.31
TPM1-228ENST00000560975 POLR2BP30876 1174 aaKnown RBP16.96■□□□□ 0.31
TPM1-228ENST00000560975 ABCE1P61221 599 aaKnown RBP16.96■□□□□ 0.31
TPM1-228ENST00000560975 MPP3Q13368 585 aa16.96■□□□□ 0.31
TPM1-228ENST00000560975 PTAR1Q7Z6K3 402 aaPredicted RBP16.96■□□□□ 0.31
TPM1-228ENST00000560975 ZNF781Q8N8C0 355 aa16.96■□□□□ 0.31
TPM1-228ENST00000560975 MAPK15Q8TD08 544 aa16.96■□□□□ 0.31
TPM1-228ENST00000560975 NLRP7Q8WX94 980 aa16.96■□□□□ 0.31
TPM1-228ENST00000560975 MOCOSQ96EN8 888 aa16.96■□□□□ 0.31
TPM1-228ENST00000560975 SIGLEC10Q96LC7 697 aa16.96■□□□□ 0.31
TPM1-228ENST00000560975 OR52B2Q96RD2 323 aa16.96■□□□□ 0.31
TPM1-228ENST00000560975 SDCBP2Q9H190 292 aa16.96■□□□□ 0.31
TPM1-228ENST00000560975 SEMA6AQ9H2E6 1030 aa16.96■□□□□ 0.31
TPM1-228ENST00000560975 TMEM216Q9P0N5 145 aa16.96■□□□□ 0.31
TPM1-228ENST00000560975 AMHP03971 560 aa16.96■□□□□ 0.31
TPM1-228ENST00000560975 SERPINB9P50453 376 aa16.96■□□□□ 0.31
TPM1-228ENST00000560975 FSCBQ5H9T9 825 aa16.96■□□□□ 0.31
TPM1-228ENST00000560975 TNS4Q8IZW8 715 aa16.96■□□□□ 0.31
TPM1-228ENST00000560975 FAM156AQ8NDB6 213 aa16.96■□□□□ 0.31
TPM1-228ENST00000560975 ZSCAN18Q8TBC5 510 aaPredicted RBP16.96■□□□□ 0.31
TPM1-228ENST00000560975 SYTL5Q8TDW5 730 aaPredicted RBP16.96■□□□□ 0.31
TPM1-228ENST00000560975 EBNA1BP2Q99848 306 aaKnown RBP16.96■□□□□ 0.31
TPM1-228ENST00000560975 ANLNQ9NQW6 1124 aa16.96■□□□□ 0.31
TPM1-228ENST00000560975 RRN3Q9NYV6 651 aa16.96■□□□□ 0.31
TPM1-228ENST00000560975 GLRA3O75311 464 aa16.95■□□□□ 0.3
TPM1-228ENST00000560975 ERBB2P04626 1255 aa16.95■□□□□ 0.3
TPM1-228ENST00000560975 F7P08709 466 aaPredicted RBP16.95■□□□□ 0.3
TPM1-228ENST00000560975 EIF4BP23588 611 aaKnown RBP16.95■□□□□ 0.3
TPM1-228ENST00000560975 EPHA3P29320 983 aa16.95■□□□□ 0.3
TPM1-228ENST00000560975 TNFSF9P41273 254 aa16.95■□□□□ 0.3
TPM1-228ENST00000560975 RAP1GAPP47736 663 aa16.95■□□□□ 0.3
TPM1-228ENST00000560975 PSMD7P51665 324 aa16.95■□□□□ 0.3
TPM1-228ENST00000560975 SLC10A2Q12908 348 aaPredicted RBP16.95■□□□□ 0.3
TPM1-228ENST00000560975 PPP2R5DQ14738 602 aa16.95■□□□□ 0.3
TPM1-228ENST00000560975 POTEHQ6S545 545 aa16.95■□□□□ 0.3
TPM1-228ENST00000560975 DPH6Q7L8W6 267 aa16.95■□□□□ 0.3
TPM1-228ENST00000560975 NIPA1Q7RTP0 329 aa16.95■□□□□ 0.3
TPM1-228ENST00000560975 ERI1Q8IV48 349 aaKnown RBP16.95■□□□□ 0.3
TPM1-228ENST00000560975 DSELQ8IZU8 1212 aa16.95■□□□□ 0.3
TPM1-228ENST00000560975 SMYD1Q8NB12 490 aa16.95■□□□□ 0.3
TPM1-228ENST00000560975 ADCY4Q8NFM4 1077 aa16.95■□□□□ 0.3
TPM1-228ENST00000560975 CLEC4DQ8WXI8 215 aa16.95■□□□□ 0.3
TPM1-228ENST00000560975 APBB2Q92870 758 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms