RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 GOLGA6L7A0A1B0GV03 622 aa15.88■□□□□ 0.13
SNRPA1-213ENST00000560856 LRRC53A6NM62 1247 aa15.88■□□□□ 0.13
SNRPA1-213ENST00000560856 ACSL4O60488 711 aa15.88■□□□□ 0.13
SNRPA1-213ENST00000560856 APODP05090 189 aa15.88■□□□□ 0.13
SNRPA1-213ENST00000560856 SLC6A4P31645 630 aa15.88■□□□□ 0.13
SNRPA1-213ENST00000560856 NOS2P35228 1153 aa15.88■□□□□ 0.13
SNRPA1-213ENST00000560856 NBL1P41271 181 aa15.88■□□□□ 0.13
SNRPA1-213ENST00000560856 TNFRSF4P43489 277 aa15.88■□□□□ 0.13
SNRPA1-213ENST00000560856 ZNF445P59923 1031 aa15.88■□□□□ 0.13
SNRPA1-213ENST00000560856 CDK17Q00537 523 aa15.88■□□□□ 0.13
SNRPA1-213ENST00000560856 ZC3H12AQ5D1E8 599 aaKnown RBP15.88■□□□□ 0.13
SNRPA1-213ENST00000560856 TRNP1Q6NT89 227 aa15.88■□□□□ 0.13
SNRPA1-213ENST00000560856 TERB1Q8NA31 727 aa15.88■□□□□ 0.13
SNRPA1-213ENST00000560856 RPLP0P6Q8NHW5 317 aa15.88■□□□□ 0.13
SNRPA1-213ENST00000560856 SLC30A5Q8TAD4 765 aa15.88■□□□□ 0.13
SNRPA1-213ENST00000560856 MYEOVQ96EZ4 313 aa15.88■□□□□ 0.13
SNRPA1-213ENST00000560856 XPO6Q96QU8 1125 aaKnown RBP15.88■□□□□ 0.13
SNRPA1-213ENST00000560856 NPY6RQ99463 290 aa15.88■□□□□ 0.13
SNRPA1-213ENST00000560856 DNAJC17Q9NVM6 304 aaKnown RBP15.88■□□□□ 0.13
SNRPA1-213ENST00000560856 XPO7Q9UIA9 1087 aaKnown RBP15.88■□□□□ 0.13
SNRPA1-213ENST00000560856 KCNU1A8MYU2 1149 aa15.87■□□□□ 0.13
SNRPA1-213ENST00000560856 PROB1E7EW31 1015 aa15.87■□□□□ 0.13
SNRPA1-213ENST00000560856 TSPAN3O60637 253 aa15.87■□□□□ 0.13
SNRPA1-213ENST00000560856 TFE3P19532 575 aaPredicted RBP15.87■□□□□ 0.13
SNRPA1-213ENST00000560856 HOXD9P28356 352 aaPredicted RBP15.87■□□□□ 0.13
SNRPA1-213ENST00000560856 HOXA6P31267 233 aa15.87■□□□□ 0.13
SNRPA1-213ENST00000560856 FLT3P36888 993 aa15.87■□□□□ 0.13
SNRPA1-213ENST00000560856 PRKCIP41743 596 aa15.87■□□□□ 0.13
SNRPA1-213ENST00000560856 MATKP42679 507 aa15.87■□□□□ 0.13
SNRPA1-213ENST00000560856 SGSHP51688 502 aa15.87■□□□□ 0.13
SNRPA1-213ENST00000560856 MRPS21P82921 87 aaKnown RBP15.87■□□□□ 0.13
SNRPA1-213ENST00000560856 CENPCQ03188 943 aa15.87■□□□□ 0.13
SNRPA1-213ENST00000560856 DMWDQ09019 674 aa15.87■□□□□ 0.13
SNRPA1-213ENST00000560856 PIK3R6Q5UE93 754 aa15.87■□□□□ 0.13
SNRPA1-213ENST00000560856 GRAMD4Q6IC98 578 aa15.87■□□□□ 0.13
SNRPA1-213ENST00000560856 MMS22LQ6ZRQ5 1243 aa15.87■□□□□ 0.13
SNRPA1-213ENST00000560856 ARCQ7LC44 396 aa15.87■□□□□ 0.13
SNRPA1-213ENST00000560856 PHF13Q86YI8 300 aaPredicted RBP15.87■□□□□ 0.13
SNRPA1-213ENST00000560856 ZBTB44Q8NCP5 570 aa15.87■□□□□ 0.13
SNRPA1-213ENST00000560856 SLC27A6Q9Y2P4 619 aa15.87■□□□□ 0.13
SNRPA1-213ENST00000560856 STARD13Q9Y3M8 1113 aa15.87■□□□□ 0.13
SNRPA1-213ENST00000560856 RIF1Q5UIP0 2472 aaKnown RBP15.86■□□□□ 0.13
SNRPA1-213ENST00000560856 TBC1D3BA6NDS4 549 aa15.86■□□□□ 0.13
SNRPA1-213ENST00000560856 PRRT4C9JH25 899 aa15.86■□□□□ 0.13
SNRPA1-213ENST00000560856 LILRB5O75023 590 aa15.86■□□□□ 0.13
SNRPA1-213ENST00000560856 ATG13O75143 517 aa15.86■□□□□ 0.13
SNRPA1-213ENST00000560856 SLC11A2P49281 568 aa15.86■□□□□ 0.13
SNRPA1-213ENST00000560856 SEC13P55735 322 aa15.86■□□□□ 0.13
SNRPA1-213ENST00000560856 GSCP56915 257 aaPredicted RBP15.86■□□□□ 0.13
SNRPA1-213ENST00000560856 MPPE1Q53F39 396 aa15.86■□□□□ 0.13
SNRPA1-213ENST00000560856 C2orf27AQ580R0 203 aa15.86■□□□□ 0.13
SNRPA1-213ENST00000560856 FAM102AQ5T9C2 384 aaPredicted RBP15.86■□□□□ 0.13
SNRPA1-213ENST00000560856 RFWD3Q6PCD5 774 aa15.86■□□□□ 0.13
SNRPA1-213ENST00000560856 SYT13Q7L8C5 426 aa15.86■□□□□ 0.13
SNRPA1-213ENST00000560856 BNIPLQ7Z465 357 aa15.86■□□□□ 0.13
SNRPA1-213ENST00000560856 IL17RCQ8NAC3 791 aa15.86■□□□□ 0.13
SNRPA1-213ENST00000560856 MSANTD4Q8NCY6 345 aa15.86■□□□□ 0.13
SNRPA1-213ENST00000560856 FAM122AQ96E09 287 aa15.86■□□□□ 0.13
SNRPA1-213ENST00000560856 TMA16Q96EY4 203 aaKnown RBP15.86■□□□□ 0.13
SNRPA1-213ENST00000560856 PGAP3Q96FM1 320 aaPredicted RBP15.86■□□□□ 0.13
SNRPA1-213ENST00000560856 C11orf70Q9BRQ4 267 aa15.86■□□□□ 0.13
SNRPA1-213ENST00000560856 IRX2Q9BZI1 471 aaPredicted RBP15.86■□□□□ 0.13
SNRPA1-213ENST00000560856 XPO4Q9C0E2 1151 aaKnown RBP15.86■□□□□ 0.13
SNRPA1-213ENST00000560856 NUCKS1Q9H1E3 243 aaKnown RBP15.86■□□□□ 0.13
SNRPA1-213ENST00000560856 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.86■□□□□ 0.13
SNRPA1-213ENST00000560856 DDIT4Q9NX09 232 aa15.86■□□□□ 0.13
SNRPA1-213ENST00000560856 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.86■□□□□ 0.13
SNRPA1-213ENST00000560856 R4GN57 208 aa15.86■□□□□ 0.13
SNRPA1-213ENST00000560856 ZFHX2Q9C0A1 2572 aaPredicted RBP15.86■□□□□ 0.13
SNRPA1-213ENST00000560856 DMDP11532 3685 aa15.85■□□□□ 0.13
SNRPA1-213ENST00000560856 A0A1W2PQJ5 194 aa15.85■□□□□ 0.13
SNRPA1-213ENST00000560856 TCRBV5S1A1TA0A578 114 aa15.85■□□□□ 0.13
SNRPA1-213ENST00000560856 GOLGA8SH3BPF8 625 aa15.85■□□□□ 0.13
SNRPA1-213ENST00000560856 I6L893 689 aaPredicted RBP15.85■□□□□ 0.13
SNRPA1-213ENST00000560856 CCDC172P0C7W6 258 aa15.85■□□□□ 0.13
SNRPA1-213ENST00000560856 HNRNPLP14866 589 aaKnown RBP eCLIP15.85■□□□□ 0.13
SNRPA1-213ENST00000560856 DGKGP49619 791 aa15.85■□□□□ 0.13
SNRPA1-213ENST00000560856 RNASE9P60153 205 aaKnown RBP15.85■□□□□ 0.13
SNRPA1-213ENST00000560856 SFMBT2Q5VUG0 894 aa15.85■□□□□ 0.13
SNRPA1-213ENST00000560856 MON1BQ7L1V2 547 aa15.85■□□□□ 0.13
SNRPA1-213ENST00000560856 ZNF571Q7Z3V5 609 aaPredicted RBP15.85■□□□□ 0.13
SNRPA1-213ENST00000560856 PHLDB2Q86SQ0 1253 aa15.85■□□□□ 0.13
SNRPA1-213ENST00000560856 RNF214Q8ND24 703 aa15.85■□□□□ 0.13
SNRPA1-213ENST00000560856 CCDC26Q8TAB7 109 aa15.85■□□□□ 0.13
SNRPA1-213ENST00000560856 DDI1Q8WTU0 396 aa15.85■□□□□ 0.13
SNRPA1-213ENST00000560856 PRICKLE1Q96MT3 831 aaPredicted RBP15.85■□□□□ 0.13
SNRPA1-213ENST00000560856 PRMT1Q99873 361 aaKnown RBP15.85■□□□□ 0.13
SNRPA1-213ENST00000560856 NUP58Q9BVL2 599 aa15.85■□□□□ 0.13
SNRPA1-213ENST00000560856 FAM126AQ9BYI3 521 aaPredicted RBP15.85■□□□□ 0.13
SNRPA1-213ENST00000560856 SLC2A11Q9BYW1 496 aa15.85■□□□□ 0.13
SNRPA1-213ENST00000560856 HAUS4Q9H6D7 363 aa15.85■□□□□ 0.13
SNRPA1-213ENST00000560856 FAM204AQ9H8W3 233 aa15.85■□□□□ 0.13
SNRPA1-213ENST00000560856 ZDHHC4Q9NPG8 344 aa15.85■□□□□ 0.13
SNRPA1-213ENST00000560856 ZSCAN32Q9NX65 697 aa15.85■□□□□ 0.13
SNRPA1-213ENST00000560856 RRN3Q9NYV6 651 aa15.85■□□□□ 0.13
SNRPA1-213ENST00000560856 TAS2R14Q9NYV8 317 aa15.85■□□□□ 0.13
SNRPA1-213ENST00000560856 MMP17Q9ULZ9 603 aa15.85■□□□□ 0.13
SNRPA1-213ENST00000560856 MYO15AQ9UKN7 3530 aa15.85■□□□□ 0.13
SNRPA1-213ENST00000560856 M0QYT0 321 aa15.84■□□□□ 0.13
SNRPA1-213ENST00000560856 ADAM23O75077 832 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms