RNA–Protein interactions for RNA: ENST00000560674.5

SYNM-203, Transcript of synemin, humanhuman

TSL 1 (best) BASIC

Gene SYNM, Length 5,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-203ENST00000560674 FAM25GB3EWG6 89 aa12.95□□□□□ -0.34
SYNM-203ENST00000560674 TSC22D2O75157 780 aa12.95□□□□□ -0.34
SYNM-203ENST00000560674 KRT6AP02538 564 aa12.95□□□□□ -0.34
SYNM-203ENST00000560674 VTNP04004 478 aa12.95□□□□□ -0.34
SYNM-203ENST00000560674 KRT6BP04259 564 aa12.95□□□□□ -0.34
SYNM-203ENST00000560674 ALADP13716 330 aa12.95□□□□□ -0.34
SYNM-203ENST00000560674 CRABP2P29373 138 aa12.95□□□□□ -0.34
SYNM-203ENST00000560674 KRT6CP48668 564 aa12.95□□□□□ -0.34
SYNM-203ENST00000560674 TKTL1P51854 596 aa12.95□□□□□ -0.34
SYNM-203ENST00000560674 TMEM132BQ14DG7 1078 aa12.95□□□□□ -0.34
SYNM-203ENST00000560674 NT5DC1Q5TFE4 455 aa12.95□□□□□ -0.34
SYNM-203ENST00000560674 ILDR2Q71H61 639 aa12.95□□□□□ -0.34
SYNM-203ENST00000560674 ANKRD13AQ8IZ07 590 aa12.95□□□□□ -0.34
SYNM-203ENST00000560674 ZNF75CPQ92670 426 aaPredicted RBP12.95□□□□□ -0.34
SYNM-203ENST00000560674 VCPIP1Q96JH7 1222 aa12.95□□□□□ -0.34
SYNM-203ENST00000560674 TSEN34Q9BSV6 310 aaKnown RBP12.95□□□□□ -0.34
SYNM-203ENST00000560674 SAR1AQ9NR31 198 aa12.95□□□□□ -0.34
SYNM-203ENST00000560674 UTP6Q9NYH9 597 aaKnown RBP12.95□□□□□ -0.34
SYNM-203ENST00000560674 ITGA11Q9UKX5 1188 aa12.95□□□□□ -0.34
SYNM-203ENST00000560674 MROH2AA6NES4 1674 aa12.95□□□□□ -0.34
SYNM-203ENST00000560674 FAM220BPB1ANY3 271 aa12.95□□□□□ -0.34
SYNM-203ENST00000560674 ATG7O95352 703 aa12.95□□□□□ -0.34
SYNM-203ENST00000560674 LDLRP01130 860 aa12.95□□□□□ -0.34
SYNM-203ENST00000560674 SSTR1P30872 391 aa12.95□□□□□ -0.34
SYNM-203ENST00000560674 NUP62P37198 522 aaPredicted RBP12.95□□□□□ -0.34
SYNM-203ENST00000560674 CDK16Q00536 496 aa12.95□□□□□ -0.34
SYNM-203ENST00000560674 EN1Q05925 392 aaPredicted RBP12.95□□□□□ -0.34
SYNM-203ENST00000560674 TBX2Q13207 712 aaPredicted RBP12.95□□□□□ -0.34
SYNM-203ENST00000560674 ITPK1Q13572 414 aa12.95□□□□□ -0.34
SYNM-203ENST00000560674 INAQ16352 499 aa12.95□□□□□ -0.34
SYNM-203ENST00000560674 ARHGEF19Q8IW93 802 aa12.95□□□□□ -0.34
SYNM-203ENST00000560674 ZCCHC7Q8N3Z6 543 aaKnown RBP12.95□□□□□ -0.34
SYNM-203ENST00000560674 ZNF614Q8N883 585 aa12.95□□□□□ -0.34
SYNM-203ENST00000560674 STK32AQ8WU08 396 aa12.95□□□□□ -0.34
SYNM-203ENST00000560674 RBM22Q9NW64 420 aaKnown RBP eCLIP12.95□□□□□ -0.34
SYNM-203ENST00000560674 RPS6KB2Q9UBS0 482 aa12.95□□□□□ -0.34
SYNM-203ENST00000560674 VPS28Q9UK41 221 aa12.95□□□□□ -0.34
SYNM-203ENST00000560674 MYRFQ9Y2G1 1151 aa12.95□□□□□ -0.34
SYNM-203ENST00000560674 SLC12A8A0AV02 714 aa12.95□□□□□ -0.34
SYNM-203ENST00000560674 INPP4BO15327 924 aa12.95□□□□□ -0.34
SYNM-203ENST00000560674 PARNO95453 639 aaKnown RBP12.95□□□□□ -0.34
SYNM-203ENST00000560674 PBLDP30039 288 aaPredicted RBP12.95□□□□□ -0.34
SYNM-203ENST00000560674 ILF2Q12905 390 aaKnown RBP12.95□□□□□ -0.34
SYNM-203ENST00000560674 ATP1A4Q13733 1029 aa12.95□□□□□ -0.34
SYNM-203ENST00000560674 ALFQ53S48 1182 aa12.95□□□□□ -0.34
SYNM-203ENST00000560674 OTUD3Q5T2D3 398 aaPredicted RBP12.95□□□□□ -0.34
SYNM-203ENST00000560674 TYW3Q6IPR3 259 aaKnown RBP12.95□□□□□ -0.34
SYNM-203ENST00000560674 NT5DC3Q86UY8 548 aa12.95□□□□□ -0.34
SYNM-203ENST00000560674 UTP15Q8TED0 518 aaKnown RBP12.95□□□□□ -0.34
SYNM-203ENST00000560674 PXMP2Q9NR77 195 aa12.95□□□□□ -0.34
SYNM-203ENST00000560674 DUSP12Q9UNI6 340 aa12.95□□□□□ -0.34
SYNM-203ENST00000560674 GTF2A1LQ9UNN4 478 aa12.95□□□□□ -0.34
SYNM-203ENST00000560674 CNTNAP4Q9C0A0 1308 aa12.95□□□□□ -0.34
SYNM-203ENST00000560674 MRASO14807 208 aa12.95□□□□□ -0.34
SYNM-203ENST00000560674 PHGDHO43175 533 aaKnown RBP12.95□□□□□ -0.34
SYNM-203ENST00000560674 ME2P23368 584 aa12.95□□□□□ -0.34
SYNM-203ENST00000560674 ST13P50502 369 aaKnown RBP12.95□□□□□ -0.34
SYNM-203ENST00000560674 ZNF268Q14587 947 aaPredicted RBP12.95□□□□□ -0.34
SYNM-203ENST00000560674 NECAB2Q7Z6G3 386 aa12.95□□□□□ -0.34
SYNM-203ENST00000560674 RIOX1Q9H6W3 641 aa12.95□□□□□ -0.34
SYNM-203ENST00000560674 STARD13Q9Y3M8 1113 aa12.95□□□□□ -0.34
SYNM-203ENST00000560674 C1orf232A0A0U1RR37 186 aa12.95□□□□□ -0.34
SYNM-203ENST00000560674 KPNA4O00629 521 aaPredicted RBP12.95□□□□□ -0.34
SYNM-203ENST00000560674 TBC1D12O60347 775 aa12.95□□□□□ -0.34
SYNM-203ENST00000560674 GRK3P35626 688 aa12.95□□□□□ -0.34
SYNM-203ENST00000560674 DPP10Q8N608 796 aa12.95□□□□□ -0.34
SYNM-203ENST00000560674 ZNF513Q8N8E2 541 aaPredicted RBP12.95□□□□□ -0.34
SYNM-203ENST00000560674 HTR3CQ8WXA8 447 aa12.95□□□□□ -0.34
SYNM-203ENST00000560674 ZNF606Q8WXB4 792 aa12.95□□□□□ -0.34
SYNM-203ENST00000560674 PRKD2Q9BZL6 878 aa12.95□□□□□ -0.34
SYNM-203ENST00000560674 TRIM8Q9BZR9 551 aa12.95□□□□□ -0.34
SYNM-203ENST00000560674 KIF20BQ96Q89 1820 aa12.95□□□□□ -0.34
SYNM-203ENST00000560674 CEMIPQ8WUJ3 1361 aa12.94□□□□□ -0.34
SYNM-203ENST00000560674 A0A096LPK6 155 aa12.94□□□□□ -0.34
SYNM-203ENST00000560674 CCNT2O60583 730 aaKnown RBP12.94□□□□□ -0.34
SYNM-203ENST00000560674 CXCL8P10145 99 aa12.94□□□□□ -0.34
SYNM-203ENST00000560674 MGAT1P26572 445 aa12.94□□□□□ -0.34
SYNM-203ENST00000560674 NPY2RP49146 381 aa12.94□□□□□ -0.34
SYNM-203ENST00000560674 SLC26A2P50443 739 aa12.94□□□□□ -0.34
SYNM-203ENST00000560674 TMC5Q6UXY8 1006 aa12.94□□□□□ -0.34
SYNM-203ENST00000560674 FAM228AQ86W67 206 aa12.94□□□□□ -0.34
SYNM-203ENST00000560674 RNFT2Q96EX2 444 aa12.94□□□□□ -0.34
SYNM-203ENST00000560674 LNPEPQ9UIQ6 1025 aa12.94□□□□□ -0.34
SYNM-203ENST00000560674 BARX2Q9UMQ3 279 aaPredicted RBP12.94□□□□□ -0.34
SYNM-203ENST00000560674 FRMPD1Q5SYB0 1578 aa12.94□□□□□ -0.34
SYNM-203ENST00000560674 ENDOD1O94919 500 aa12.94□□□□□ -0.34
SYNM-203ENST00000560674 PSMC6P62333 389 aa12.94□□□□□ -0.34
SYNM-203ENST00000560674 IRGCQ6NXR0 463 aa12.94□□□□□ -0.34
SYNM-203ENST00000560674 POU5F2Q8N7G0 328 aa12.94□□□□□ -0.34
SYNM-203ENST00000560674 PAIP1Q9H074 479 aaKnown RBP12.94□□□□□ -0.34
SYNM-203ENST00000560674 NRDE2Q9H7Z3 1164 aa12.94□□□□□ -0.34
SYNM-203ENST00000560674 CBX6O95503 412 aa12.94□□□□□ -0.34
SYNM-203ENST00000560674 VCLP18206 1134 aa12.94□□□□□ -0.34
SYNM-203ENST00000560674 PPIDQ08752 370 aaKnown RBP12.94□□□□□ -0.34
SYNM-203ENST00000560674 C16orf72Q14CZ0 275 aa12.94□□□□□ -0.34
SYNM-203ENST00000560674 MARC1Q5VT66 337 aa12.94□□□□□ -0.34
SYNM-203ENST00000560674 ZDHHC17Q8IUH5 632 aa12.94□□□□□ -0.34
SYNM-203ENST00000560674 CLVS1Q8IUQ0 354 aaPredicted RBP12.94□□□□□ -0.34
SYNM-203ENST00000560674 FBXO39Q8N4B4 442 aa12.94□□□□□ -0.34
SYNM-203ENST00000560674 SETD9Q8NE22 299 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms