RNA–Protein interactions for RNA: ENST00000560496.5

SNRPA1-212, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-212ENST00000560496 TIGD1Q96MW7 591 aa10.61□□□□□ -0.71
SNRPA1-212ENST00000560496 OLA1Q9NTK5 396 aaKnown RBP10.61□□□□□ -0.71
SNRPA1-212ENST00000560496 ARMCX3Q9UH62 379 aaPredicted RBP10.61□□□□□ -0.71
SNRPA1-212ENST00000560496 SFMBT1Q9UHJ3 866 aa10.61□□□□□ -0.71
SNRPA1-212ENST00000560496 MAN1B1Q9UKM7 699 aa10.61□□□□□ -0.71
SNRPA1-212ENST00000560496 SLC6A14Q9UN76 642 aa10.61□□□□□ -0.71
SNRPA1-212ENST00000560496 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.61□□□□□ -0.71
SNRPA1-212ENST00000560496 NUMA1Q14980 2115 aa10.6□□□□□ -0.71
SNRPA1-212ENST00000560496 UPK3BL1B0FP48 263 aa10.6□□□□□ -0.71
SNRPA1-212ENST00000560496 C1QTNF9BB2RNN3 333 aa10.6□□□□□ -0.71
SNRPA1-212ENST00000560496 UPK3BL2E5RIL1 263 aa10.6□□□□□ -0.71
SNRPA1-212ENST00000560496 RNF225M0QZC1 329 aaPredicted RBP10.6□□□□□ -0.71
SNRPA1-212ENST00000560496 NPC1O15118 1278 aa10.6□□□□□ -0.71
SNRPA1-212ENST00000560496 PMM2O15305 246 aa10.6□□□□□ -0.71
SNRPA1-212ENST00000560496 GJB3O75712 270 aa10.6□□□□□ -0.71
SNRPA1-212ENST00000560496 LATS1O95835 1130 aa10.6□□□□□ -0.71
SNRPA1-212ENST00000560496 CALCAP01258 141 aa10.6□□□□□ -0.71
SNRPA1-212ENST00000560496 IGLV3-19P01714 112 aa10.6□□□□□ -0.71
SNRPA1-212ENST00000560496 IGLV3-27P01718 113 aa10.6□□□□□ -0.71
SNRPA1-212ENST00000560496 CYBBP04839 570 aa10.6□□□□□ -0.71
SNRPA1-212ENST00000560496 C1QTNF9P0C862 333 aa10.6□□□□□ -0.71
SNRPA1-212ENST00000560496 VDRP11473 427 aa10.6□□□□□ -0.71
SNRPA1-212ENST00000560496 NCAM1P13591 858 aa10.6□□□□□ -0.71
SNRPA1-212ENST00000560496 BRD2P25440 801 aaKnown RBP10.6□□□□□ -0.71
SNRPA1-212ENST00000560496 CD6P30203 668 aa10.6□□□□□ -0.71
SNRPA1-212ENST00000560496 HLA-FP30511 346 aa10.6□□□□□ -0.71
SNRPA1-212ENST00000560496 ZNF132P52740 706 aa10.6□□□□□ -0.71
SNRPA1-212ENST00000560496 SLC8A3P57103 927 aa10.6□□□□□ -0.71
SNRPA1-212ENST00000560496 YWHAEP62258 255 aaKnown RBP10.6□□□□□ -0.71
SNRPA1-212ENST00000560496 LRMPQ12912 555 aa10.6□□□□□ -0.71
SNRPA1-212ENST00000560496 BSPRYQ5W0U4 402 aa10.6□□□□□ -0.71
SNRPA1-212ENST00000560496 SDE2Q6IQ49 451 aa10.6□□□□□ -0.71
SNRPA1-212ENST00000560496 LCLAT1Q6UWP7 414 aa10.6□□□□□ -0.71
SNRPA1-212ENST00000560496 UNQ6494/PRO21346Q6UXR6 183 aa10.6□□□□□ -0.71
SNRPA1-212ENST00000560496 RABEPKQ7Z6M1 372 aa10.6□□□□□ -0.71
SNRPA1-212ENST00000560496 METTL3Q86U44 580 aaKnown RBP10.6□□□□□ -0.71
SNRPA1-212ENST00000560496 CACUL1Q86Y37 369 aa10.6□□□□□ -0.71
SNRPA1-212ENST00000560496 ARHGEF19Q8IW93 802 aa10.6□□□□□ -0.71
SNRPA1-212ENST00000560496 MINDY1Q8N5J2 469 aa10.6□□□□□ -0.71
SNRPA1-212ENST00000560496 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.6□□□□□ -0.71
SNRPA1-212ENST00000560496 TRIML1Q8N9V2 468 aa10.6□□□□□ -0.71
SNRPA1-212ENST00000560496 CEP76Q8TAP6 659 aa10.6□□□□□ -0.71
SNRPA1-212ENST00000560496 UBA3Q8TBC4 463 aa10.6□□□□□ -0.71
SNRPA1-212ENST00000560496 CLEC4CQ8WTT0 213 aa10.6□□□□□ -0.71
SNRPA1-212ENST00000560496 SORCS1Q8WY21 1168 aa10.6□□□□□ -0.71
SNRPA1-212ENST00000560496 EDEM1Q92611 657 aa10.6□□□□□ -0.71
SNRPA1-212ENST00000560496 ZNF419Q96HQ0 510 aaPredicted RBP10.6□□□□□ -0.71
SNRPA1-212ENST00000560496 PRICKLE1Q96MT3 831 aaPredicted RBP10.6□□□□□ -0.71
SNRPA1-212ENST00000560496 CEP63Q96MT8 703 aa10.6□□□□□ -0.71
SNRPA1-212ENST00000560496 ADAM33Q9BZ11 813 aa10.6□□□□□ -0.71
SNRPA1-212ENST00000560496 LRRC4Q9HBW1 653 aa10.6□□□□□ -0.71
SNRPA1-212ENST00000560496 CNGB3Q9NQW8 809 aa10.6□□□□□ -0.71
SNRPA1-212ENST00000560496 ELOVL2Q9NXB9 296 aa10.6□□□□□ -0.71
SNRPA1-212ENST00000560496 WSB2Q9NYS7 404 aaPredicted RBP10.6□□□□□ -0.71
SNRPA1-212ENST00000560496 HESX1Q9UBX0 185 aa10.6□□□□□ -0.71
SNRPA1-212ENST00000560496 HBS1LQ9Y450 684 aaKnown RBP10.6□□□□□ -0.71
SNRPA1-212ENST00000560496 NBEAQ8NFP9 2946 aa10.6□□□□□ -0.71
SNRPA1-212ENST00000560496 GON4LQ3T8J9 2241 aa10.6□□□□□ -0.71
SNRPA1-212ENST00000560496 PTPRBP23467 1997 aa10.59□□□□□ -0.71
SNRPA1-212ENST00000560496 ITPR1Q14643 2758 aa10.59□□□□□ -0.71
SNRPA1-212ENST00000560496 M0QYV0 167 aa10.59□□□□□ -0.71
SNRPA1-212ENST00000560496 PSMA7O14818 248 aa10.59□□□□□ -0.71
SNRPA1-212ENST00000560496 SMC2O95347 1197 aa10.59□□□□□ -0.71
SNRPA1-212ENST00000560496 PAEPP09466 180 aa10.59□□□□□ -0.71
SNRPA1-212ENST00000560496 C7P10643 843 aa10.59□□□□□ -0.71
SNRPA1-212ENST00000560496 RGS7P49802 495 aa10.59□□□□□ -0.71
SNRPA1-212ENST00000560496 STARD3Q14849 445 aa10.59□□□□□ -0.71
SNRPA1-212ENST00000560496 FAM133BQ5BKY9 247 aaKnown RBP10.59□□□□□ -0.71
SNRPA1-212ENST00000560496 ISM2Q6H9L7 571 aa10.59□□□□□ -0.71
SNRPA1-212ENST00000560496 PMF1Q6P1K2 205 aa10.59□□□□□ -0.71
SNRPA1-212ENST00000560496 FOXR2Q6PJQ5 311 aa10.59□□□□□ -0.71
SNRPA1-212ENST00000560496 TMEM270Q6UE05 265 aa10.59□□□□□ -0.71
SNRPA1-212ENST00000560496 KIAA0907Q7Z7F0 614 aaPredicted RBP10.59□□□□□ -0.71
SNRPA1-212ENST00000560496 SIX6OS1Q8N1H7 587 aa10.59□□□□□ -0.71
SNRPA1-212ENST00000560496 DDI1Q8WTU0 396 aa10.59□□□□□ -0.71
SNRPA1-212ENST00000560496 SLC35F5Q8WV83 523 aa10.59□□□□□ -0.71
SNRPA1-212ENST00000560496 GATA6Q92908 595 aa10.59□□□□□ -0.71
SNRPA1-212ENST00000560496 NT5C1BQ96P26 610 aa10.59□□□□□ -0.71
SNRPA1-212ENST00000560496 IPO9Q96P70 1041 aaKnown RBP10.59□□□□□ -0.71
SNRPA1-212ENST00000560496 GTPBP2Q9BX10 602 aaKnown RBP10.59□□□□□ -0.71
SNRPA1-212ENST00000560496 SLC2A11Q9BYW1 496 aa10.59□□□□□ -0.71
SNRPA1-212ENST00000560496 CIPCQ9C0C6 399 aa10.59□□□□□ -0.71
SNRPA1-212ENST00000560496 PRDM16Q9HAZ2 1276 aa10.59□□□□□ -0.71
SNRPA1-212ENST00000560496 METTL14Q9HCE5 456 aaKnown RBP10.59□□□□□ -0.71
SNRPA1-212ENST00000560496 ABCC13Q9NSE7 274 aa10.59□□□□□ -0.71
SNRPA1-212ENST00000560496 DNAAF2Q9NVR5 837 aaKnown RBP10.59□□□□□ -0.71
SNRPA1-212ENST00000560496 PPP1R3GB7ZBB8 358 aa10.58□□□□□ -0.72
SNRPA1-212ENST00000560496 PIK3R2O00459 728 aa10.58□□□□□ -0.72
SNRPA1-212ENST00000560496 ARHGAP33O14559 1287 aa10.58□□□□□ -0.72
SNRPA1-212ENST00000560496 TSPAN3O60637 253 aa10.58□□□□□ -0.72
SNRPA1-212ENST00000560496 PROS1P07225 676 aa10.58□□□□□ -0.72
SNRPA1-212ENST00000560496 HLA-EP13747 358 aa10.58□□□□□ -0.72
SNRPA1-212ENST00000560496 LCP1P13796 627 aa10.58□□□□□ -0.72
SNRPA1-212ENST00000560496 CD59P13987 128 aa10.58□□□□□ -0.72
SNRPA1-212ENST00000560496 SLC6A4P31645 630 aa10.58□□□□□ -0.72
SNRPA1-212ENST00000560496 HARS2P49590 506 aaKnown RBP10.58□□□□□ -0.72
SNRPA1-212ENST00000560496 TPMTP51580 245 aa10.58□□□□□ -0.72
SNRPA1-212ENST00000560496 MARSP56192 900 aaKnown RBP10.58□□□□□ -0.72
SNRPA1-212ENST00000560496 ZNF445P59923 1031 aa10.58□□□□□ -0.72
SNRPA1-212ENST00000560496 FAM193AP78312 1265 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms