RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 TNMDQ9H2S6 317 aa17.41■□□□□ 0.38
HERC1-207ENST00000560316 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.41■□□□□ 0.38
HERC1-207ENST00000560316 PCDHGA1Q9Y5H4 931 aa17.41■□□□□ 0.38
HERC1-207ENST00000560316 CAPN9O14815 690 aa17.4■□□□□ 0.38
HERC1-207ENST00000560316 PAPSS1O43252 624 aaPredicted RBP17.4■□□□□ 0.38
HERC1-207ENST00000560316 TIMM44O43615 452 aa17.4■□□□□ 0.38
HERC1-207ENST00000560316 EXOC3O60645 756 aa17.4■□□□□ 0.38
HERC1-207ENST00000560316 RFPL3O75679 317 aa17.4■□□□□ 0.38
HERC1-207ENST00000560316 LDOC1O95751 146 aaPredicted RBP17.4■□□□□ 0.38
HERC1-207ENST00000560316 RALAP11233 206 aa17.4■□□□□ 0.38
HERC1-207ENST00000560316 BCAT1P54687 386 aa17.4■□□□□ 0.38
HERC1-207ENST00000560316 C21orf59P57076 290 aa17.4■□□□□ 0.38
HERC1-207ENST00000560316 COG7P83436 770 aa17.4■□□□□ 0.38
HERC1-207ENST00000560316 HES3Q5TGS1 186 aa17.4■□□□□ 0.38
HERC1-207ENST00000560316 SPOPLQ6IQ16 392 aa17.4■□□□□ 0.38
HERC1-207ENST00000560316 PCSK4Q6UW60 755 aa17.4■□□□□ 0.38
HERC1-207ENST00000560316 GPR155Q7Z3F1 870 aa17.4■□□□□ 0.38
HERC1-207ENST00000560316 UNC93AQ86WB7 457 aa17.4■□□□□ 0.38
HERC1-207ENST00000560316 TWNKQ96RR1 684 aa17.4■□□□□ 0.38
HERC1-207ENST00000560316 HNRNPABQ99729 332 aaKnown RBP17.4■□□□□ 0.38
HERC1-207ENST00000560316 DCLK3Q9C098 648 aa17.4■□□□□ 0.38
HERC1-207ENST00000560316 TMEM245Q9H330 911 aa17.4■□□□□ 0.38
HERC1-207ENST00000560316 MGAQ8IWI9 3026 aa17.39■□□□□ 0.38
HERC1-207ENST00000560316 DFNA5O60443 496 aa17.39■□□□□ 0.37
HERC1-207ENST00000560316 KIF20AO95235 890 aa17.39■□□□□ 0.37
HERC1-207ENST00000560316 P4HA1P13674 534 aa17.39■□□□□ 0.37
HERC1-207ENST00000560316 PSEN1P49768 467 aa17.39■□□□□ 0.37
HERC1-207ENST00000560316 RPS14P62263 151 aaKnown RBP17.39■□□□□ 0.37
HERC1-207ENST00000560316 SNRPFP62306 86 aaKnown RBP17.39■□□□□ 0.37
HERC1-207ENST00000560316 CCDC186Q7Z3E2 898 aa17.39■□□□□ 0.37
HERC1-207ENST00000560316 ZNF276Q8N554 614 aa17.39■□□□□ 0.37
HERC1-207ENST00000560316 PARD3BQ8TEW8 1205 aa17.39■□□□□ 0.37
HERC1-207ENST00000560316 BAP1Q92560 729 aa17.39■□□□□ 0.37
HERC1-207ENST00000560316 CYFIP2Q96F07 1278 aa17.39■□□□□ 0.37
HERC1-207ENST00000560316 SLC6A18Q96N87 628 aa17.39■□□□□ 0.37
HERC1-207ENST00000560316 ACE2Q9BYF1 805 aaPredicted RBP17.39■□□□□ 0.37
HERC1-207ENST00000560316 SLC2A11Q9BYW1 496 aa17.39■□□□□ 0.37
HERC1-207ENST00000560316 PRSS16Q9NQE7 514 aa17.39■□□□□ 0.37
HERC1-207ENST00000560316 KBTBD4Q9NVX7 518 aa17.39■□□□□ 0.37
HERC1-207ENST00000560316 TEX51A0A1B0GUA7 166 aa17.38■□□□□ 0.37
HERC1-207ENST00000560316 FAM47DPA6NHR8 397 aa17.38■□□□□ 0.37
HERC1-207ENST00000560316 J3QKU1 62 aa17.38■□□□□ 0.37
HERC1-207ENST00000560316 DNTTP04053 509 aa17.38■□□□□ 0.37
HERC1-207ENST00000560316 IGHV4-34P06331 123 aa17.38■□□□□ 0.37
HERC1-207ENST00000560316 ASPAP45381 313 aa17.38■□□□□ 0.37
HERC1-207ENST00000560316 ACADVLP49748 655 aa17.38■□□□□ 0.37
HERC1-207ENST00000560316 AP3M2P53677 418 aa17.38■□□□□ 0.37
HERC1-207ENST00000560316 CFHR1Q03591 330 aa17.38■□□□□ 0.37
HERC1-207ENST00000560316 CCDC173Q0VFZ6 552 aa17.38■□□□□ 0.37
HERC1-207ENST00000560316 RTP5Q14D33 572 aa17.38■□□□□ 0.37
HERC1-207ENST00000560316 SHBQ15464 509 aa17.38■□□□□ 0.37
HERC1-207ENST00000560316 E2F4Q16254 413 aa17.38■□□□□ 0.37
HERC1-207ENST00000560316 SGSM1Q2NKQ1 1148 aa17.38■□□□□ 0.37
HERC1-207ENST00000560316 CPXM2Q8N436 756 aa17.38■□□□□ 0.37
HERC1-207ENST00000560316 EID2Q8N6I1 236 aa17.38■□□□□ 0.37
HERC1-207ENST00000560316 SNIP1Q8TAD8 396 aaKnown RBP17.38■□□□□ 0.37
HERC1-207ENST00000560316 ELF4Q99607 663 aaPredicted RBP17.38■□□□□ 0.37
HERC1-207ENST00000560316 LRRC27Q9C0I9 530 aa17.38■□□□□ 0.37
HERC1-207ENST00000560316 NRSN2Q9GZP1 204 aa17.38■□□□□ 0.37
HERC1-207ENST00000560316 PNPLA8Q9NP80 782 aa17.38■□□□□ 0.37
HERC1-207ENST00000560316 CLIC5Q9NZA1 410 aa17.38■□□□□ 0.37
HERC1-207ENST00000560316 PLA2G4CQ9UP65 541 aa17.38■□□□□ 0.37
HERC1-207ENST00000560316 UBE4BO95155 1302 aa17.38■□□□□ 0.37
HERC1-207ENST00000560316 COL5A1P20908 1838 aaPredicted RBP17.37■□□□□ 0.37
HERC1-207ENST00000560316 SLC12A8A0AV02 714 aa17.37■□□□□ 0.37
HERC1-207ENST00000560316 VILLO15195 856 aa17.37■□□□□ 0.37
HERC1-207ENST00000560316 STX6O43752 255 aa17.37■□□□□ 0.37
HERC1-207ENST00000560316 WNT1P04628 370 aa17.37■□□□□ 0.37
HERC1-207ENST00000560316 ITGAVP06756 1048 aa17.37■□□□□ 0.37
HERC1-207ENST00000560316 C1SP09871 688 aa17.37■□□□□ 0.37
HERC1-207ENST00000560316 C7P10643 843 aa17.37■□□□□ 0.37
HERC1-207ENST00000560316 ABCB4P21439 1286 aa17.37■□□□□ 0.37
HERC1-207ENST00000560316 HOXD9P28356 352 aaPredicted RBP17.37■□□□□ 0.37
HERC1-207ENST00000560316 HLA-FP30511 346 aa17.37■□□□□ 0.37
HERC1-207ENST00000560316 RACK1P63244 317 aaKnown RBP17.37■□□□□ 0.37
HERC1-207ENST00000560316 CXADRP78310 365 aa17.37■□□□□ 0.37
HERC1-207ENST00000560316 DLG4P78352 724 aa17.37■□□□□ 0.37
HERC1-207ENST00000560316 CLDN10P78369 228 aa17.37■□□□□ 0.37
HERC1-207ENST00000560316 KIAA0895LQ68EN5 471 aa17.37■□□□□ 0.37
HERC1-207ENST00000560316 FBXL19Q6PCT2 694 aa17.37■□□□□ 0.37
HERC1-207ENST00000560316 CHST9Q7L1S5 443 aa17.37■□□□□ 0.37
HERC1-207ENST00000560316 C12orf56Q8IXR9 622 aa17.37■□□□□ 0.37
HERC1-207ENST00000560316 SAP25Q8TEE9 199 aa17.37■□□□□ 0.37
HERC1-207ENST00000560316 FGF11Q92914 225 aa17.37■□□□□ 0.37
HERC1-207ENST00000560316 USP28Q96RU2 1077 aa17.37■□□□□ 0.37
HERC1-207ENST00000560316 CDK5RAP1Q96SZ6 601 aaKnown RBP17.37■□□□□ 0.37
HERC1-207ENST00000560316 ARID3AQ99856 593 aa17.37■□□□□ 0.37
HERC1-207ENST00000560316 SGK2Q9HBY8 427 aa17.37■□□□□ 0.37
HERC1-207ENST00000560316 SLC39A2Q9NP94 309 aa17.37■□□□□ 0.37
HERC1-207ENST00000560316 PPP4R2Q9NY27 417 aa17.37■□□□□ 0.37
HERC1-207ENST00000560316 MARCH2Q9P0N8 246 aa17.37■□□□□ 0.37
HERC1-207ENST00000560316 TFIP11Q9UBB9 837 aaKnown RBP17.37■□□□□ 0.37
HERC1-207ENST00000560316 USP3Q9Y6I4 520 aa17.37■□□□□ 0.37
HERC1-207ENST00000560316 MYLKQ15746 1914 aa17.37■□□□□ 0.37
HERC1-207ENST00000560316 TP53BP1Q12888 1972 aaPredicted RBP17.37■□□□□ 0.37
HERC1-207ENST00000560316 ATMQ13315 3056 aa17.36■□□□□ 0.37
HERC1-207ENST00000560316 PLXNA2O75051 1894 aa17.36■□□□□ 0.37
HERC1-207ENST00000560316 BRINP1O60477 761 aa17.36■□□□□ 0.37
HERC1-207ENST00000560316 CASP1P29466 404 aa17.36■□□□□ 0.37
HERC1-207ENST00000560316 TLE3Q04726 772 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms