RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 TLR6Q9Y2C9 796 aa9.75□□□□□ -0.85
HERC1-206ENST00000559996 SYNJ2BP-COX16A0A087WUM0 186 aa9.74□□□□□ -0.85
HERC1-206ENST00000559996 SLC12A8A0AV02 714 aa9.74□□□□□ -0.85
HERC1-206ENST00000559996 FAM72CH0Y354 149 aa9.74□□□□□ -0.85
HERC1-206ENST00000559996 ZNF197O14709 1029 aa9.74□□□□□ -0.85
HERC1-206ENST00000559996 RNF8O76064 485 aa9.74□□□□□ -0.85
HERC1-206ENST00000559996 CD48P09326 243 aa9.74□□□□□ -0.85
HERC1-206ENST00000559996 TCF3P15923 654 aa9.74□□□□□ -0.85
HERC1-206ENST00000559996 FCARP24071 287 aa9.74□□□□□ -0.85
HERC1-206ENST00000559996 DDX6P26196 483 aaKnown RBP eCLIP9.74□□□□□ -0.85
HERC1-206ENST00000559996 L1CAMP32004 1257 aa9.74□□□□□ -0.85
HERC1-206ENST00000559996 TBX4P57082 545 aa9.74□□□□□ -0.85
HERC1-206ENST00000559996 GNG11P61952 73 aa9.74□□□□□ -0.85
HERC1-206ENST00000559996 RING1Q06587 406 aa9.74□□□□□ -0.85
HERC1-206ENST00000559996 SCAPQ12770 1279 aa9.74□□□□□ -0.85
HERC1-206ENST00000559996 NME3Q13232 169 aa9.74□□□□□ -0.85
HERC1-206ENST00000559996 PPP2R5DQ14738 602 aa9.74□□□□□ -0.85
HERC1-206ENST00000559996 TAZQ16635 292 aa9.74□□□□□ -0.85
HERC1-206ENST00000559996 KCNT1Q5JUK3 1230 aa9.74□□□□□ -0.85
HERC1-206ENST00000559996 ATAT1Q5SQI0 421 aa9.74□□□□□ -0.85
HERC1-206ENST00000559996 ERMARDQ5T6L9 678 aa9.74□□□□□ -0.85
HERC1-206ENST00000559996 FAM72AQ5TYM5 149 aa9.74□□□□□ -0.85
HERC1-206ENST00000559996 NADSYN1Q6IA69 706 aa9.74□□□□□ -0.85
HERC1-206ENST00000559996 FAM72DQ6L9T8 149 aa9.74□□□□□ -0.85
HERC1-206ENST00000559996 AADACL2Q6P093 401 aa9.74□□□□□ -0.85
HERC1-206ENST00000559996 ELMSAN1Q6PJG2 1045 aa9.74□□□□□ -0.85
HERC1-206ENST00000559996 POLNQ7Z5Q5 900 aa9.74□□□□□ -0.85
HERC1-206ENST00000559996 FAM72BQ86X60 149 aa9.74□□□□□ -0.85
HERC1-206ENST00000559996 MIB1Q86YT6 1006 aa9.74□□□□□ -0.85
HERC1-206ENST00000559996 NPAS3Q8IXF0 933 aa9.74□□□□□ -0.85
HERC1-206ENST00000559996 SYCE1Q8N0S2 351 aa9.74□□□□□ -0.85
HERC1-206ENST00000559996 MICALL1Q8N3F8 863 aa9.74□□□□□ -0.85
HERC1-206ENST00000559996 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.74□□□□□ -0.85
HERC1-206ENST00000559996 RNF139Q8WU17 664 aa9.74□□□□□ -0.85
HERC1-206ENST00000559996 ING5Q8WYH8 240 aa9.74□□□□□ -0.85
HERC1-206ENST00000559996 RAPGEF5Q92565 580 aa9.74□□□□□ -0.85
HERC1-206ENST00000559996 TSC1Q92574 1164 aa9.74□□□□□ -0.85
HERC1-206ENST00000559996 MRPS31Q92665 395 aaKnown RBP9.74□□□□□ -0.85
HERC1-206ENST00000559996 GOLGA1Q92805 767 aa9.74□□□□□ -0.85
HERC1-206ENST00000559996 FGF13Q92913 245 aa9.74□□□□□ -0.85
HERC1-206ENST00000559996 NTAN1Q96AB6 310 aa9.74□□□□□ -0.85
HERC1-206ENST00000559996 SERPINB11Q96P15 392 aa9.74□□□□□ -0.85
HERC1-206ENST00000559996 MYADMQ96S97 322 aa9.74□□□□□ -0.85
HERC1-206ENST00000559996 CDK5RAP1Q96SZ6 601 aaKnown RBP9.74□□□□□ -0.85
HERC1-206ENST00000559996 PRMT1Q99873 361 aaKnown RBP9.74□□□□□ -0.85
HERC1-206ENST00000559996 HERPUD2Q9BSE4 406 aa9.74□□□□□ -0.85
HERC1-206ENST00000559996 SNRNP25Q9BV90 132 aaKnown RBP9.74□□□□□ -0.85
HERC1-206ENST00000559996 SMG9Q9H0W8 520 aaKnown RBP9.74□□□□□ -0.85
HERC1-206ENST00000559996 WDCPQ9H6R7 721 aa9.74□□□□□ -0.85
HERC1-206ENST00000559996 UBE2ZQ9H832 354 aaPredicted RBP9.74□□□□□ -0.85
HERC1-206ENST00000559996 PIDD1Q9HB75 910 aa9.74□□□□□ -0.85
HERC1-206ENST00000559996 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.74□□□□□ -0.85
HERC1-206ENST00000559996 GPATCH2LQ9NWQ4 482 aa9.74□□□□□ -0.85
HERC1-206ENST00000559996 COX16Q9P0S2 106 aa9.74□□□□□ -0.85
HERC1-206ENST00000559996 RASAL2Q9UJF2 1139 aa9.74□□□□□ -0.85
HERC1-206ENST00000559996 STOML2Q9UJZ1 356 aa9.74□□□□□ -0.85
HERC1-206ENST00000559996 NEU3Q9UQ49 428 aa9.74□□□□□ -0.85
HERC1-206ENST00000559996 MRPS23Q9Y3D9 190 aaKnown RBP9.74□□□□□ -0.85
HERC1-206ENST00000559996 HBS1LQ9Y450 684 aaKnown RBP9.74□□□□□ -0.85
HERC1-206ENST00000559996 JRKLQ9Y4A0 524 aa9.74□□□□□ -0.85
HERC1-206ENST00000559996 SNX10Q9Y5X0 201 aa9.74□□□□□ -0.85
HERC1-206ENST00000559996 CPQQ9Y646 472 aa9.74□□□□□ -0.85
HERC1-206ENST00000559996 CLUHO75153 1309 aa9.74□□□□□ -0.85
HERC1-206ENST00000559996 DENND4AQ7Z401 1863 aa9.74□□□□□ -0.85
HERC1-206ENST00000559996 C5orf42Q9H799 3197 aa9.73□□□□□ -0.85
HERC1-206ENST00000559996 GOLGA6L7A0A1B0GV03 622 aa9.73□□□□□ -0.85
HERC1-206ENST00000559996 GOLGA8CPA6NN73 597 aa9.73□□□□□ -0.85
HERC1-206ENST00000559996 H3BQ06 376 aaPredicted RBP9.73□□□□□ -0.85
HERC1-206ENST00000559996 MBTPS2O43462 519 aa9.73□□□□□ -0.85
HERC1-206ENST00000559996 KIF5CO60282 957 aa9.73□□□□□ -0.85
HERC1-206ENST00000559996 PRAMEF12O95522 483 aa9.73□□□□□ -0.85
HERC1-206ENST00000559996 HMBSP08397 361 aa9.73□□□□□ -0.85
HERC1-206ENST00000559996 PYGMP11217 842 aa9.73□□□□□ -0.85
HERC1-206ENST00000559996 MBL2P11226 248 aaPredicted RBP9.73□□□□□ -0.85
HERC1-206ENST00000559996 FOSL2P15408 326 aa9.73□□□□□ -0.85
HERC1-206ENST00000559996 FSHRP23945 695 aa9.73□□□□□ -0.85
HERC1-206ENST00000559996 KDELR1P24390 212 aa9.73□□□□□ -0.85
HERC1-206ENST00000559996 GBP1P32455 592 aa9.73□□□□□ -0.85
HERC1-206ENST00000559996 MLLT6P55198 1093 aaPredicted RBP9.73□□□□□ -0.85
HERC1-206ENST00000559996 COG7P83436 770 aa9.73□□□□□ -0.85
HERC1-206ENST00000559996 ADCY2Q08462 1091 aa9.73□□□□□ -0.85
HERC1-206ENST00000559996 CLUL1Q15846 466 aa9.73□□□□□ -0.85
HERC1-206ENST00000559996 SMTNL2Q2TAL5 461 aa9.73□□□□□ -0.85
HERC1-206ENST00000559996 BOLA3Q53S33 107 aa9.73□□□□□ -0.85
HERC1-206ENST00000559996 FAM78AQ5JUQ0 283 aa9.73□□□□□ -0.85
HERC1-206ENST00000559996 BRMS1LQ5PSV4 323 aa9.73□□□□□ -0.85
HERC1-206ENST00000559996 PIK3R6Q5UE93 754 aa9.73□□□□□ -0.85
HERC1-206ENST00000559996 MANEALQ5VSG8 457 aa9.73□□□□□ -0.85
HERC1-206ENST00000559996 SCYL2Q6P3W7 929 aa9.73□□□□□ -0.85
HERC1-206ENST00000559996 SYT10Q6XYQ8 523 aa9.73□□□□□ -0.85
HERC1-206ENST00000559996 HTR3DQ70Z44 454 aa9.73□□□□□ -0.85
HERC1-206ENST00000559996 RSRC2Q7L4I2 434 aaKnown RBP9.73□□□□□ -0.85
HERC1-206ENST00000559996 PEX26Q7Z412 305 aa9.73□□□□□ -0.85
HERC1-206ENST00000559996 C14orf80Q86SX3 495 aa9.73□□□□□ -0.85
HERC1-206ENST00000559996 ARID3BQ8IVW6 561 aaPredicted RBP9.73□□□□□ -0.85
HERC1-206ENST00000559996 RHOT1Q8IXI2 618 aa9.73□□□□□ -0.85
HERC1-206ENST00000559996 FAM217AQ8IXS0 508 aa9.73□□□□□ -0.85
HERC1-206ENST00000559996 ZDHHC14Q8IZN3 488 aa9.73□□□□□ -0.85
HERC1-206ENST00000559996 UBE2Q2Q8WVN8 375 aa9.73□□□□□ -0.85
HERC1-206ENST00000559996 TEKT4Q8WW24 435 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms