RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 MAPK8IP2Q13387 824 aaPredicted RBP21.08■□□□□ 0.97
TSPAN3-207ENST00000559494 ASTE1Q2TB18 679 aaPredicted RBP21.08■□□□□ 0.97
TSPAN3-207ENST00000559494 ANO4Q32M45 955 aa21.08■□□□□ 0.97
TSPAN3-207ENST00000559494 CCDC14Q49A88 953 aa21.08■□□□□ 0.97
TSPAN3-207ENST00000559494 PPP1R15BQ5SWA1 713 aa21.08■□□□□ 0.97
TSPAN3-207ENST00000559494 ADGRF1Q5T601 910 aa21.08■□□□□ 0.97
TSPAN3-207ENST00000559494 C1orf228Q6PIY5 440 aa21.08■□□□□ 0.97
TSPAN3-207ENST00000559494 BNIPLQ7Z465 357 aa21.08■□□□□ 0.97
TSPAN3-207ENST00000559494 VPS36Q86VN1 386 aa21.08■□□□□ 0.97
TSPAN3-207ENST00000559494 PJA1Q8NG27 643 aa21.08■□□□□ 0.97
TSPAN3-207ENST00000559494 PGAP3Q96FM1 320 aaPredicted RBP21.08■□□□□ 0.97
TSPAN3-207ENST00000559494 OSBPL6Q9BZF3 934 aa21.08■□□□□ 0.97
TSPAN3-207ENST00000559494 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.08■□□□□ 0.97
TSPAN3-207ENST00000559494 MARK1Q9P0L2 795 aa21.08■□□□□ 0.97
TSPAN3-207ENST00000559494 XPO7Q9UIA9 1087 aaKnown RBP21.08■□□□□ 0.97
TSPAN3-207ENST00000559494 STAP1Q9ULZ2 295 aa21.08■□□□□ 0.97
TSPAN3-207ENST00000559494 NENFQ9UMX5 172 aa21.08■□□□□ 0.97
TSPAN3-207ENST00000559494 KCNU1A8MYU2 1149 aa21.07■□□□□ 0.96
TSPAN3-207ENST00000559494 ADCY5O95622 1261 aa21.07■□□□□ 0.96
TSPAN3-207ENST00000559494 PDGFRAP16234 1089 aa21.07■□□□□ 0.96
TSPAN3-207ENST00000559494 SLC11A2P49281 568 aa21.07■□□□□ 0.96
TSPAN3-207ENST00000559494 NADSYN1Q6IA69 706 aa21.07■□□□□ 0.96
TSPAN3-207ENST00000559494 PLEKHA7Q6IQ23 1121 aa21.07■□□□□ 0.96
TSPAN3-207ENST00000559494 DNAJC24Q6P3W2 148 aa21.07■□□□□ 0.96
TSPAN3-207ENST00000559494 C12orf40Q86WS4 652 aa21.07■□□□□ 0.96
TSPAN3-207ENST00000559494 CCDC105Q8IYK2 499 aa21.07■□□□□ 0.96
TSPAN3-207ENST00000559494 NAT16Q8N8M0 369 aa21.07■□□□□ 0.96
TSPAN3-207ENST00000559494 TMEM105Q8N8V8 129 aa21.07■□□□□ 0.96
TSPAN3-207ENST00000559494 PIGVQ9NUD9 493 aa21.07■□□□□ 0.96
TSPAN3-207ENST00000559494 ZNF318Q5VUA4 2279 aa21.07■□□□□ 0.96
TSPAN3-207ENST00000559494 MIA3Q5JRA6 1907 aa21.06■□□□□ 0.96
TSPAN3-207ENST00000559494 SSU72P8A0A1W2PR75 194 aa21.06■□□□□ 0.96
TSPAN3-207ENST00000559494 ATMINO43313 823 aaPredicted RBP21.06■□□□□ 0.96
TSPAN3-207ENST00000559494 TSPAN3O60637 253 aa21.06■□□□□ 0.96
TSPAN3-207ENST00000559494 ENDOD1O94919 500 aa21.06■□□□□ 0.96
TSPAN3-207ENST00000559494 MOCS2O96007 188 aaPredicted RBP21.06■□□□□ 0.96
TSPAN3-207ENST00000559494 F9P00740 461 aa21.06■□□□□ 0.96
TSPAN3-207ENST00000559494 DCNP07585 359 aaKnown RBP21.06■□□□□ 0.96
TSPAN3-207ENST00000559494 CHRNB1P11230 501 aa21.06■□□□□ 0.96
TSPAN3-207ENST00000559494 AVPR2P30518 371 aa21.06■□□□□ 0.96
TSPAN3-207ENST00000559494 SLC6A4P31645 630 aa21.06■□□□□ 0.96
TSPAN3-207ENST00000559494 CCR1P32246 355 aa21.06■□□□□ 0.96
TSPAN3-207ENST00000559494 CXCR3P49682 368 aa21.06■□□□□ 0.96
TSPAN3-207ENST00000559494 ATXN1P54253 815 aaKnown RBP21.06■□□□□ 0.96
TSPAN3-207ENST00000559494 RPL7AP62424 266 aaKnown RBP21.06■□□□□ 0.96
TSPAN3-207ENST00000559494 MAMLD1Q13495 774 aa21.06■□□□□ 0.96
TSPAN3-207ENST00000559494 PPP2R5DQ14738 602 aa21.06■□□□□ 0.96
TSPAN3-207ENST00000559494 RAB6CQ53S08 254 aa21.06■□□□□ 0.96
TSPAN3-207ENST00000559494 FAM133BQ5BKY9 247 aaKnown RBP21.06■□□□□ 0.96
TSPAN3-207ENST00000559494 TMEM196Q5HYL7 178 aa21.06■□□□□ 0.96
TSPAN3-207ENST00000559494 CCDC122Q5T0U0 273 aa21.06■□□□□ 0.96
TSPAN3-207ENST00000559494 FSTL4Q6MZW2 842 aa21.06■□□□□ 0.96
TSPAN3-207ENST00000559494 ALKBH5Q6P6C2 394 aaKnown RBP21.06■□□□□ 0.96
TSPAN3-207ENST00000559494 SUGP1Q8IWZ8 645 aaKnown RBP21.06■□□□□ 0.96
TSPAN3-207ENST00000559494 ETFBKMTQ8IXQ9 262 aa21.06■□□□□ 0.96
TSPAN3-207ENST00000559494 CD101Q93033 1021 aa21.06■□□□□ 0.96
TSPAN3-207ENST00000559494 BHMTQ93088 406 aa21.06■□□□□ 0.96
TSPAN3-207ENST00000559494 RNF34Q969K3 372 aa21.06■□□□□ 0.96
TSPAN3-207ENST00000559494 CLDN23Q96B33 292 aa21.06■□□□□ 0.96
TSPAN3-207ENST00000559494 P2RY13Q9BPV8 354 aa21.06■□□□□ 0.96
TSPAN3-207ENST00000559494 BBS2Q9BXC9 721 aa21.06■□□□□ 0.96
TSPAN3-207ENST00000559494 RAB6CQ9H0N0 254 aa21.06■□□□□ 0.96
TSPAN3-207ENST00000559494 LMAN1LQ9HAT1 526 aa21.06■□□□□ 0.96
TSPAN3-207ENST00000559494 PLK2Q9NYY3 685 aa21.06■□□□□ 0.96
TSPAN3-207ENST00000559494 NEDD8-MDP1E9PL57 170 aa21.05■□□□□ 0.96
TSPAN3-207ENST00000559494 APOEP02649 317 aa21.05■□□□□ 0.96
TSPAN3-207ENST00000559494 SLC2A3P11169 496 aa21.05■□□□□ 0.96
TSPAN3-207ENST00000559494 TYRP14679 529 aa21.05■□□□□ 0.96
TSPAN3-207ENST00000559494 ATP11AP98196 1134 aa21.05■□□□□ 0.96
TSPAN3-207ENST00000559494 DEUP1Q05D60 604 aa21.05■□□□□ 0.96
TSPAN3-207ENST00000559494 GFPT1Q06210 699 aaPredicted RBP21.05■□□□□ 0.96
TSPAN3-207ENST00000559494 MESP2Q0VG99 397 aa21.05■□□□□ 0.96
TSPAN3-207ENST00000559494 C15orf59Q2T9L4 293 aaPredicted RBP21.05■□□□□ 0.96
TSPAN3-207ENST00000559494 SH3PXD2AQ5TCZ1 1133 aa21.05■□□□□ 0.96
TSPAN3-207ENST00000559494 FYB2Q5VWT5 728 aa21.05■□□□□ 0.96
TSPAN3-207ENST00000559494 RFWD3Q6PCD5 774 aa21.05■□□□□ 0.96
TSPAN3-207ENST00000559494 ATP6V0D2Q8N8Y2 350 aa21.05■□□□□ 0.96
TSPAN3-207ENST00000559494 MYEOVQ96EZ4 313 aa21.05■□□□□ 0.96
TSPAN3-207ENST00000559494 BTN2A3PQ96KV6 586 aa21.05■□□□□ 0.96
TSPAN3-207ENST00000559494 NHEJ1Q9H9Q4 299 aaPredicted RBP21.05■□□□□ 0.96
TSPAN3-207ENST00000559494 ANLNQ9NQW6 1124 aa21.05■□□□□ 0.96
TSPAN3-207ENST00000559494 PARVAQ9NVD7 372 aa21.05■□□□□ 0.96
TSPAN3-207ENST00000559494 DLGAP2Q9P1A6 1054 aa21.05■□□□□ 0.96
TSPAN3-207ENST00000559494 CNOT8Q9UFF9 292 aaKnown RBP21.05■□□□□ 0.96
TSPAN3-207ENST00000559494 MYO18AQ92614 2054 aaKnown RBP21.05■□□□□ 0.96
TSPAN3-207ENST00000559494 CACNA1IQ9P0X4 2223 aa21.05■□□□□ 0.96
TSPAN3-207ENST00000559494 TRIM24O15164 1050 aa21.04■□□□□ 0.96
TSPAN3-207ENST00000559494 PENKP01210 267 aaPredicted RBP21.04■□□□□ 0.96
TSPAN3-207ENST00000559494 GPD1P21695 349 aa21.04■□□□□ 0.96
TSPAN3-207ENST00000559494 CDC25BP30305 580 aa21.04■□□□□ 0.96
TSPAN3-207ENST00000559494 SDC4P31431 198 aa21.04■□□□□ 0.96
TSPAN3-207ENST00000559494 PTPN9P43378 593 aa21.04■□□□□ 0.96
TSPAN3-207ENST00000559494 SLC18A3Q16572 532 aa21.04■□□□□ 0.96
TSPAN3-207ENST00000559494 PIK3R6Q5UE93 754 aa21.04■□□□□ 0.96
TSPAN3-207ENST00000559494 CENPIQ92674 756 aaPredicted RBP21.04■□□□□ 0.96
TSPAN3-207ENST00000559494 EZH1Q92800 747 aaPredicted RBP21.04■□□□□ 0.96
TSPAN3-207ENST00000559494 ZNF653Q96CK0 615 aa21.04■□□□□ 0.96
TSPAN3-207ENST00000559494 TMA16Q96EY4 203 aaKnown RBP21.04■□□□□ 0.96
TSPAN3-207ENST00000559494 MCEEQ96PE7 176 aa21.04■□□□□ 0.96
TSPAN3-207ENST00000559494 WDCPQ9H6R7 721 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms