RNA–Protein interactions for RNA: ENST00000559460.5

SMAD3-211, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-211ENST00000559460 DMAP1Q9NPF5 467 aaPredicted RBP10.18□□□□□ -0.78
SMAD3-211ENST00000559460 COMMD8Q9NX08 183 aa10.18□□□□□ -0.78
SMAD3-211ENST00000559460 FBXL12Q9NXK8 326 aa10.18□□□□□ -0.78
SMAD3-211ENST00000559460 HSPBP1Q9NZL4 362 aa10.18□□□□□ -0.78
SMAD3-211ENST00000559460 PCDHGA8Q9Y5G5 932 aa10.18□□□□□ -0.78
SMAD3-211ENST00000559460 COL12A1Q99715 3063 aa10.18□□□□□ -0.78
SMAD3-211ENST00000559460 TISP43B9A030 160 aa10.17□□□□□ -0.78
SMAD3-211ENST00000559460 CLDN5O00501 218 aa10.17□□□□□ -0.78
SMAD3-211ENST00000559460 GP1BAP07359 652 aa10.17□□□□□ -0.78
SMAD3-211ENST00000559460 FDPSP14324 419 aaKnown RBP10.17□□□□□ -0.78
SMAD3-211ENST00000559460 PTPN1P18031 435 aaKnown RBP10.17□□□□□ -0.78
SMAD3-211ENST00000559460 MLLT3P42568 568 aaPredicted RBP10.17□□□□□ -0.78
SMAD3-211ENST00000559460 PLA2G4AP47712 749 aa10.17□□□□□ -0.78
SMAD3-211ENST00000559460 CACNA2D1P54289 1103 aa10.17□□□□□ -0.78
SMAD3-211ENST00000559460 GALCP54803 685 aa10.17□□□□□ -0.78
SMAD3-211ENST00000559460 SLC12A3P55017 1021 aa10.17□□□□□ -0.78
SMAD3-211ENST00000559460 RPS14P62263 151 aaKnown RBP10.17□□□□□ -0.78
SMAD3-211ENST00000559460 TNNC1P63316 161 aa10.17□□□□□ -0.78
SMAD3-211ENST00000559460 GUCY1B3Q02153 619 aa10.17□□□□□ -0.78
SMAD3-211ENST00000559460 NCAPHQ15003 741 aa10.17□□□□□ -0.78
SMAD3-211ENST00000559460 ANKRD1Q15327 319 aa10.17□□□□□ -0.78
SMAD3-211ENST00000559460 ISXQ2M1V0 245 aa10.17□□□□□ -0.78
SMAD3-211ENST00000559460 GPBP1Q86WP2 473 aa10.17□□□□□ -0.78
SMAD3-211ENST00000559460 ZNF366Q8N895 744 aa10.17□□□□□ -0.78
SMAD3-211ENST00000559460 OR2T34Q8NGX1 318 aa10.17□□□□□ -0.78
SMAD3-211ENST00000559460 DDI1Q8WTU0 396 aa10.17□□□□□ -0.78
SMAD3-211ENST00000559460 PHF12Q96QT6 1004 aa10.17□□□□□ -0.78
SMAD3-211ENST00000559460 OMDQ99983 421 aa10.17□□□□□ -0.78
SMAD3-211ENST00000559460 ORAI3Q9BRQ5 295 aa10.17□□□□□ -0.78
SMAD3-211ENST00000559460 TJP2Q9UDY2 1190 aa10.17□□□□□ -0.78
SMAD3-211ENST00000559460 PLEKHB1Q9UF11 243 aaPredicted RBP10.17□□□□□ -0.78
SMAD3-211ENST00000559460 EXOC7Q9UPT5 735 aa10.17□□□□□ -0.78
SMAD3-211ENST00000559460 SPTAN1Q13813 2472 aaKnown RBP10.17□□□□□ -0.78
SMAD3-211ENST00000559460 A0A1B0GVM2 712 aa10.16□□□□□ -0.78
SMAD3-211ENST00000559460 A0A1W2PR77 199 aa10.16□□□□□ -0.78
SMAD3-211ENST00000559460 A8MXQ7 604 aa10.16□□□□□ -0.78
SMAD3-211ENST00000559460 FFAR2O15552 330 aa10.16□□□□□ -0.78
SMAD3-211ENST00000559460 RNASEH2AO75792 299 aaKnown RBP10.16□□□□□ -0.78
SMAD3-211ENST00000559460 TNFSF15O95150 251 aa10.16□□□□□ -0.78
SMAD3-211ENST00000559460 PENKP01210 267 aaPredicted RBP10.16□□□□□ -0.78
SMAD3-211ENST00000559460 THEGLP0DJG4 465 aa10.16□□□□□ -0.78
SMAD3-211ENST00000559460 CKMT1AP12532 417 aa10.16□□□□□ -0.78
SMAD3-211ENST00000559460 SKOR1P84550 965 aa10.16□□□□□ -0.78
SMAD3-211ENST00000559460 FOXK1P85037 733 aa10.16□□□□□ -0.78
SMAD3-211ENST00000559460 GTF2BQ00403 316 aa10.16□□□□□ -0.78
SMAD3-211ENST00000559460 DHX8Q14562 1220 aaKnown RBP10.16□□□□□ -0.78
SMAD3-211ENST00000559460 CRELD2Q6UXH1 353 aaPredicted RBP10.16□□□□□ -0.78
SMAD3-211ENST00000559460 PTRH1Q86Y79 214 aaKnown RBP10.16□□□□□ -0.78
SMAD3-211ENST00000559460 B3GALNT2Q8NCR0 500 aa10.16□□□□□ -0.78
SMAD3-211ENST00000559460 OR4C6Q8NH72 309 aa10.16□□□□□ -0.78
SMAD3-211ENST00000559460 SAAL1Q96ER3 474 aa10.16□□□□□ -0.78
SMAD3-211ENST00000559460 SMARCD1Q96GM5 515 aa10.16□□□□□ -0.78
SMAD3-211ENST00000559460 KCNK16Q96T55 309 aa10.16□□□□□ -0.78
SMAD3-211ENST00000559460 SLC2A11Q9BYW1 496 aa10.16□□□□□ -0.78
SMAD3-211ENST00000559460 DCLK3Q9C098 648 aa10.16□□□□□ -0.78
SMAD3-211ENST00000559460 EPN3Q9H201 632 aa10.16□□□□□ -0.78
SMAD3-211ENST00000559460 FOXP1Q9H334 677 aaPredicted RBP10.16□□□□□ -0.78
SMAD3-211ENST00000559460 PABPC3Q9H361 631 aaKnown RBP10.16□□□□□ -0.78
SMAD3-211ENST00000559460 CYLDQ9NQC7 956 aa10.16□□□□□ -0.78
SMAD3-211ENST00000559460 SEPT10Q9P0V9 454 aa10.16□□□□□ -0.78
SMAD3-211ENST00000559460 SUN2Q9UH99 717 aa10.16□□□□□ -0.78
SMAD3-211ENST00000559460 STYXL1Q9Y6J8 313 aa10.16□□□□□ -0.78
SMAD3-211ENST00000559460 AHCTF1Q8WYP5 2266 aa10.16□□□□□ -0.78
SMAD3-211ENST00000559460 TP53BP1Q12888 1972 aaPredicted RBP10.15□□□□□ -0.78
SMAD3-211ENST00000559460 CDRT15L2A8MXV6 281 aa10.15□□□□□ -0.78
SMAD3-211ENST00000559460 TRIM38O00635 465 aa10.15□□□□□ -0.78
SMAD3-211ENST00000559460 GREM1O60565 184 aa10.15□□□□□ -0.78
SMAD3-211ENST00000559460 TBX18O95935 607 aa10.15□□□□□ -0.78
SMAD3-211ENST00000559460 ATP5BP06576 529 aaKnown RBP10.15□□□□□ -0.78
SMAD3-211ENST00000559460 ZDHHC11BP0C7U3 371 aa10.15□□□□□ -0.78
SMAD3-211ENST00000559460 CCR5P51681 352 aa10.15□□□□□ -0.78
SMAD3-211ENST00000559460 ST8SIA6P61647 398 aa10.15□□□□□ -0.78
SMAD3-211ENST00000559460 OVGP1Q12889 678 aa10.15□□□□□ -0.78
SMAD3-211ENST00000559460 STAT4Q14765 748 aa10.15□□□□□ -0.78
SMAD3-211ENST00000559460 IGFBP7Q16270 282 aa10.15□□□□□ -0.78
SMAD3-211ENST00000559460 C10orf120Q5SQS8 335 aa10.15□□□□□ -0.78
SMAD3-211ENST00000559460 FYB2Q5VWT5 728 aa10.15□□□□□ -0.78
SMAD3-211ENST00000559460 HIST2H2BCQ6DN03 193 aa10.15□□□□□ -0.78
SMAD3-211ENST00000559460 NAPEPLDQ6IQ20 393 aa10.15□□□□□ -0.78
SMAD3-211ENST00000559460 Q6ZNB5 142 aa10.15□□□□□ -0.78
SMAD3-211ENST00000559460 FAM35AQ86V20 835 aa10.15□□□□□ -0.78
SMAD3-211ENST00000559460 ATCAYQ86WG3 371 aa10.15□□□□□ -0.78
SMAD3-211ENST00000559460 JAMLQ86YT9 394 aa10.15□□□□□ -0.78
SMAD3-211ENST00000559460 MFSD2AQ8NA29 543 aa10.15□□□□□ -0.78
SMAD3-211ENST00000559460 RASSF8Q8NHQ8 419 aa10.15□□□□□ -0.78
SMAD3-211ENST00000559460 WDR36Q8NI36 951 aaKnown RBP10.15□□□□□ -0.78
SMAD3-211ENST00000559460 ZNF564Q8TBZ8 553 aaPredicted RBP10.15□□□□□ -0.78
SMAD3-211ENST00000559460 WFIKKN2Q8TEU8 576 aa10.15□□□□□ -0.78
SMAD3-211ENST00000559460 CYB5D2Q8WUJ1 264 aa10.15□□□□□ -0.78
SMAD3-211ENST00000559460 HVCN1Q96D96 273 aa10.15□□□□□ -0.78
SMAD3-211ENST00000559460 ATXN7L3BQ96GX2 97 aa10.15□□□□□ -0.78
SMAD3-211ENST00000559460 PIWIL1Q96J94 861 aaKnown RBP10.15□□□□□ -0.78
SMAD3-211ENST00000559460 C8orf76Q96K31 380 aa10.15□□□□□ -0.78
SMAD3-211ENST00000559460 USP29Q9HBJ7 922 aa10.15□□□□□ -0.78
SMAD3-211ENST00000559460 PRSS16Q9NQE7 514 aa10.15□□□□□ -0.78
SMAD3-211ENST00000559460 TMPRSS4Q9NRS4 437 aa10.15□□□□□ -0.78
SMAD3-211ENST00000559460 SIX4Q9UIU6 781 aa10.15□□□□□ -0.78
SMAD3-211ENST00000559460 PLXNA2O75051 1894 aa10.15□□□□□ -0.79
SMAD3-211ENST00000559460 A0A1W2PP55 124 aa10.14□□□□□ -0.79
SMAD3-211ENST00000559460 CLEC18AA5D8T8 446 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms