RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 TXNRD3NBQ6F5E7 133 aa17.19■□□□□ 0.34
TPM1-219ENST00000559397 KLHDC10Q6PID8 442 aa17.19■□□□□ 0.34
TPM1-219ENST00000559397 TMCO3Q6UWJ1 677 aa17.19■□□□□ 0.34
TPM1-219ENST00000559397 MTERF4Q7Z6M4 381 aaKnown RBP17.19■□□□□ 0.34
TPM1-219ENST00000559397 ADAT2Q7Z6V5 191 aaKnown RBP17.19■□□□□ 0.34
TPM1-219ENST00000559397 C12orf50Q8NA57 414 aaPredicted RBP17.19■□□□□ 0.34
TPM1-219ENST00000559397 RNF139Q8WU17 664 aa17.19■□□□□ 0.34
TPM1-219ENST00000559397 MAIP1Q8WWC4 291 aa17.19■□□□□ 0.34
TPM1-219ENST00000559397 RBM41Q96IZ5 413 aaKnown RBP17.19■□□□□ 0.34
TPM1-219ENST00000559397 SLC22A12Q96S37 553 aa17.19■□□□□ 0.34
TPM1-219ENST00000559397 CDK5RAP1Q96SZ6 601 aaKnown RBP17.19■□□□□ 0.34
TPM1-219ENST00000559397 NPY6RQ99463 290 aa17.19■□□□□ 0.34
TPM1-219ENST00000559397 HERPUD2Q9BSE4 406 aa17.19■□□□□ 0.34
TPM1-219ENST00000559397 ADAM33Q9BZ11 813 aa17.19■□□□□ 0.34
TPM1-219ENST00000559397 POMKQ9H5K3 350 aa17.19■□□□□ 0.34
TPM1-219ENST00000559397 TASP1Q9H6P5 420 aa17.19■□□□□ 0.34
TPM1-219ENST00000559397 GDF3Q9NR23 364 aa17.19■□□□□ 0.34
TPM1-219ENST00000559397 USP15Q9Y4E8 981 aaPredicted RBP17.19■□□□□ 0.34
TPM1-219ENST00000559397 ERLIN1O75477 346 aa17.18■□□□□ 0.34
TPM1-219ENST00000559397 IGLV3-25P01717 112 aa17.18■□□□□ 0.34
TPM1-219ENST00000559397 KRT7P08729 469 aa17.18■□□□□ 0.34
TPM1-219ENST00000559397 PTPN7P35236 360 aa17.18■□□□□ 0.34
TPM1-219ENST00000559397 COPS2P61201 443 aa17.18■□□□□ 0.34
TPM1-219ENST00000559397 KLF1Q13351 362 aaPredicted RBP17.18■□□□□ 0.34
TPM1-219ENST00000559397 SMAD4Q13485 552 aaKnown RBP17.18■□□□□ 0.34
TPM1-219ENST00000559397 EIF4EBP2Q13542 120 aaPredicted RBP17.18■□□□□ 0.34
TPM1-219ENST00000559397 HADHQ16836 314 aaKnown RBP17.18■□□□□ 0.34
TPM1-219ENST00000559397 BEND6Q5SZJ8 279 aaPredicted RBP17.18■□□□□ 0.34
TPM1-219ENST00000559397 GPR158Q5T848 1215 aa17.18■□□□□ 0.34
TPM1-219ENST00000559397 BNIPLQ7Z465 357 aa17.18■□□□□ 0.34
TPM1-219ENST00000559397 TADA2BQ86TJ2 420 aa17.18■□□□□ 0.34
TPM1-219ENST00000559397 MAB21L3Q8N8X9 362 aa17.18■□□□□ 0.34
TPM1-219ENST00000559397 MAFAQ8NHW3 353 aaPredicted RBP17.18■□□□□ 0.34
TPM1-219ENST00000559397 CCDC26Q8TAB7 109 aa17.18■□□□□ 0.34
TPM1-219ENST00000559397 DQX1Q8TE96 717 aaKnown RBP17.18■□□□□ 0.34
TPM1-219ENST00000559397 ING5Q8WYH8 240 aa17.18■□□□□ 0.34
TPM1-219ENST00000559397 NECTIN4Q96NY8 510 aa17.18■□□□□ 0.34
TPM1-219ENST00000559397 CYP2S1Q96SQ9 504 aa17.18■□□□□ 0.34
TPM1-219ENST00000559397 OSBPL8Q9BZF1 889 aa17.18■□□□□ 0.34
TPM1-219ENST00000559397 TRPC7Q9HCX4 862 aa17.18■□□□□ 0.34
TPM1-219ENST00000559397 ARFGAP3Q9NP61 516 aa17.18■□□□□ 0.34
TPM1-219ENST00000559397 OLA1Q9NTK5 396 aaKnown RBP17.18■□□□□ 0.34
TPM1-219ENST00000559397 CALCOCO1Q9P1Z2 691 aa17.18■□□□□ 0.34
TPM1-219ENST00000559397 MDM4O15151 490 aa17.17■□□□□ 0.34
TPM1-219ENST00000559397 MBTPS2O43462 519 aa17.17■□□□□ 0.34
TPM1-219ENST00000559397 RNF8O76064 485 aa17.17■□□□□ 0.34
TPM1-219ENST00000559397 HEXIM1O94992 359 aaKnown RBP17.17■□□□□ 0.34
TPM1-219ENST00000559397 TFE3P19532 575 aaPredicted RBP17.17■□□□□ 0.34
TPM1-219ENST00000559397 IL1R2P27930 398 aa17.17■□□□□ 0.34
TPM1-219ENST00000559397 MIPP30301 263 aa17.17■□□□□ 0.34
TPM1-219ENST00000559397 CHRNA3P32297 505 aa17.17■□□□□ 0.34
TPM1-219ENST00000559397 ATP5C1P36542 298 aaKnown RBP17.17■□□□□ 0.34
TPM1-219ENST00000559397 CBX2Q14781 532 aaPredicted RBP17.17■□□□□ 0.34
TPM1-219ENST00000559397 TAZQ16635 292 aa17.17■□□□□ 0.34
TPM1-219ENST00000559397 SLC25A52Q3SY17 297 aa17.17■□□□□ 0.34
TPM1-219ENST00000559397 ARHGAP15Q53QZ3 475 aa17.17■□□□□ 0.34
TPM1-219ENST00000559397 C10orf120Q5SQS8 335 aa17.17■□□□□ 0.34
TPM1-219ENST00000559397 GET4Q7L5D6 327 aaPredicted RBP17.17■□□□□ 0.34
TPM1-219ENST00000559397 MAATS1Q7Z4T9 603 aa17.17■□□□□ 0.34
TPM1-219ENST00000559397 ANKS1BQ7Z6G8 1248 aa17.17■□□□□ 0.34
TPM1-219ENST00000559397 NPAS3Q8IXF0 933 aa17.17■□□□□ 0.34
TPM1-219ENST00000559397 ARL14EPQ8N8R7 260 aaPredicted RBP17.17■□□□□ 0.34
TPM1-219ENST00000559397 FGF13Q92913 245 aa17.17■□□□□ 0.34
TPM1-219ENST00000559397 ZSWIM3Q96MP5 696 aa17.17■□□□□ 0.34
TPM1-219ENST00000559397 CFAP57Q96MR6 1250 aa17.17■□□□□ 0.34
TPM1-219ENST00000559397 SMOC2Q9H3U7 446 aa17.17■□□□□ 0.34
TPM1-219ENST00000559397 RRN3Q9NYV6 651 aa17.17■□□□□ 0.34
TPM1-219ENST00000559397 PCYOX1Q9UHG3 505 aa17.17■□□□□ 0.34
TPM1-219ENST00000559397 SFMBT1Q9UHJ3 866 aa17.17■□□□□ 0.34
TPM1-219ENST00000559397 AMACRQ9UHK6 382 aa17.17■□□□□ 0.34
TPM1-219ENST00000559397 ZMYM5Q9UJ78 669 aa17.17■□□□□ 0.34
TPM1-219ENST00000559397 STAP1Q9ULZ2 295 aa17.17■□□□□ 0.34
TPM1-219ENST00000559397 TRAV19A0A0A6YYK7 116 aa17.16■□□□□ 0.34
TPM1-219ENST00000559397 TRUB2O95900 331 aaKnown RBP17.16■□□□□ 0.34
TPM1-219ENST00000559397 KRT1P04264 644 aa17.16■□□□□ 0.34
TPM1-219ENST00000559397 HDCP19113 662 aa17.16■□□□□ 0.34
TPM1-219ENST00000559397 SDC4P31431 198 aa17.16■□□□□ 0.34
TPM1-219ENST00000559397 GJC1P36383 396 aa17.16■□□□□ 0.34
TPM1-219ENST00000559397 PTPN9P43378 593 aa17.16■□□□□ 0.34
TPM1-219ENST00000559397 EFEMP1Q12805 493 aa17.16■□□□□ 0.34
TPM1-219ENST00000559397 C15orf59Q2T9L4 293 aaPredicted RBP17.16■□□□□ 0.34
TPM1-219ENST00000559397 LEXMQ3ZCV2 418 aa17.16■□□□□ 0.34
TPM1-219ENST00000559397 TAC4Q86UU9 113 aa17.16■□□□□ 0.34
TPM1-219ENST00000559397 IFT20Q8IY31 132 aa17.16■□□□□ 0.34
TPM1-219ENST00000559397 RAPGEF5Q92565 580 aa17.16■□□□□ 0.34
TPM1-219ENST00000559397 CENPIQ92674 756 aaPredicted RBP17.16■□□□□ 0.34
TPM1-219ENST00000559397 MAGOHBQ96A72 148 aaKnown RBP17.16■□□□□ 0.34
TPM1-219ENST00000559397 PGAP3Q96FM1 320 aaPredicted RBP17.16■□□□□ 0.34
TPM1-219ENST00000559397 TBCBQ99426 244 aa17.16■□□□□ 0.34
TPM1-219ENST00000559397 NCAPGQ9BPX3 1015 aa17.16■□□□□ 0.34
TPM1-219ENST00000559397 LRRC19Q9H756 370 aa17.16■□□□□ 0.34
TPM1-219ENST00000559397 DNMT3LQ9UJW3 386 aa17.16■□□□□ 0.34
TPM1-219ENST00000559397 DOCK8Q8NF50 2099 aa17.16■□□□□ 0.34
TPM1-219ENST00000559397 C3orf70A6NLC5 250 aaPredicted RBP17.16■□□□□ 0.34
TPM1-219ENST00000559397 ENDOD1O94919 500 aa17.16■□□□□ 0.34
TPM1-219ENST00000559397 CETN2P41208 172 aa17.16■□□□□ 0.34
TPM1-219ENST00000559397 PTGIRP43119 386 aa17.16■□□□□ 0.34
TPM1-219ENST00000559397 SULT1E1P49888 294 aa17.16■□□□□ 0.34
TPM1-219ENST00000559397 SLC7A9P82251 487 aa17.16■□□□□ 0.34
TPM1-219ENST00000559397 DHX34Q14147 1143 aaKnown RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms