RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 MTSS1LQ765P7 747 aa15.39■□□□□ 0.05
SNRPA1-207ENST00000559309 KIAA1328Q86T90 577 aa15.39■□□□□ 0.05
SNRPA1-207ENST00000559309 CPNE8Q86YQ8 564 aa15.39■□□□□ 0.05
SNRPA1-207ENST00000559309 MIB1Q86YT6 1006 aa15.39■□□□□ 0.05
SNRPA1-207ENST00000559309 TDRD5Q8NAT2 981 aaKnown RBP15.39■□□□□ 0.05
SNRPA1-207ENST00000559309 FAM71BQ8TC56 605 aa15.39■□□□□ 0.05
SNRPA1-207ENST00000559309 KIAA1524Q8TCG1 905 aa15.39■□□□□ 0.05
SNRPA1-207ENST00000559309 FAM122AQ96E09 287 aa15.39■□□□□ 0.05
SNRPA1-207ENST00000559309 PEBP4Q96S96 227 aa15.39■□□□□ 0.05
SNRPA1-207ENST00000559309 PRMT1Q99873 361 aaKnown RBP15.39■□□□□ 0.05
SNRPA1-207ENST00000559309 FAM83CQ9BQN1 747 aa15.39■□□□□ 0.05
SNRPA1-207ENST00000559309 IRX2Q9BZI1 471 aaPredicted RBP15.39■□□□□ 0.05
SNRPA1-207ENST00000559309 TSGA10Q9BZW7 698 aa15.39■□□□□ 0.05
SNRPA1-207ENST00000559309 SLITRK6Q9H5Y7 841 aa15.39■□□□□ 0.05
SNRPA1-207ENST00000559309 GRID2IPA4D2P6 1211 aa15.38■□□□□ 0.05
SNRPA1-207ENST00000559309 HEPACAM2A8MVW5 462 aa15.38■□□□□ 0.05
SNRPA1-207ENST00000559309 KRT86O43790 486 aa15.38■□□□□ 0.05
SNRPA1-207ENST00000559309 SLC2A3P11169 496 aa15.38■□□□□ 0.05
SNRPA1-207ENST00000559309 TCF4P15884 667 aa15.38■□□□□ 0.05
SNRPA1-207ENST00000559309 IL1R2P27930 398 aa15.38■□□□□ 0.05
SNRPA1-207ENST00000559309 CCR1P32246 355 aa15.38■□□□□ 0.05
SNRPA1-207ENST00000559309 ADRA1BP35368 520 aa15.38■□□□□ 0.05
SNRPA1-207ENST00000559309 SLC1A1P43005 524 aa15.38■□□□□ 0.05
SNRPA1-207ENST00000559309 DEUP1Q05D60 604 aa15.38■□□□□ 0.05
SNRPA1-207ENST00000559309 MTA1Q13330 715 aa15.38■□□□□ 0.05
SNRPA1-207ENST00000559309 FAM133BQ5BKY9 247 aaKnown RBP15.38■□□□□ 0.05
SNRPA1-207ENST00000559309 ZC3H12AQ5D1E8 599 aaKnown RBP15.38■□□□□ 0.05
SNRPA1-207ENST00000559309 PSTKQ8IV42 348 aaKnown RBP15.38■□□□□ 0.05
SNRPA1-207ENST00000559309 UNC45BQ8IWX7 931 aa15.38■□□□□ 0.05
SNRPA1-207ENST00000559309 ZNF683Q8IZ20 524 aa15.38■□□□□ 0.05
SNRPA1-207ENST00000559309 CCAR2Q8N163 923 aaKnown RBP15.38■□□□□ 0.05
SNRPA1-207ENST00000559309 DEPDC1BQ8WUY9 529 aa15.38■□□□□ 0.05
SNRPA1-207ENST00000559309 UBE2Q2Q8WVN8 375 aa15.38■□□□□ 0.05
SNRPA1-207ENST00000559309 OTUB2Q96DC9 234 aa15.38■□□□□ 0.05
SNRPA1-207ENST00000559309 P2RY11Q96G91 374 aa15.38■□□□□ 0.05
SNRPA1-207ENST00000559309 C1orf74Q96LT6 269 aa15.38■□□□□ 0.05
SNRPA1-207ENST00000559309 HAPLN3Q96S86 360 aa15.38■□□□□ 0.05
SNRPA1-207ENST00000559309 RPP25Q9BUL9 199 aaKnown RBP15.38■□□□□ 0.05
SNRPA1-207ENST00000559309 DCLK3Q9C098 648 aa15.38■□□□□ 0.05
SNRPA1-207ENST00000559309 EPHX3Q9H6B9 360 aa15.38■□□□□ 0.05
SNRPA1-207ENST00000559309 FAM204AQ9H8W3 233 aa15.38■□□□□ 0.05
SNRPA1-207ENST00000559309 ZFP14Q9HCL3 533 aa15.38■□□□□ 0.05
SNRPA1-207ENST00000559309 SMPD4Q9NXE4 827 aa15.38■□□□□ 0.05
SNRPA1-207ENST00000559309 CFAP97Q9P2B7 532 aa15.38■□□□□ 0.05
SNRPA1-207ENST00000559309 IGSF9Q9P2J2 1179 aa15.38■□□□□ 0.05
SNRPA1-207ENST00000559309 AGO1Q9UL18 857 aaKnown RBP15.38■□□□□ 0.05
SNRPA1-207ENST00000559309 NEU3Q9UQ49 428 aa15.38■□□□□ 0.05
SNRPA1-207ENST00000559309 ZNF510Q9Y2H8 683 aa15.38■□□□□ 0.05
SNRPA1-207ENST00000559309 ALG6Q9Y672 507 aa15.38■□□□□ 0.05
SNRPA1-207ENST00000559309 CAPN6Q9Y6Q1 641 aa15.38■□□□□ 0.05
SNRPA1-207ENST00000559309 USP27XA6NNY8 438 aa15.37■□□□□ 0.05
SNRPA1-207ENST00000559309 ZSCAN12O43309 604 aa15.37■□□□□ 0.05
SNRPA1-207ENST00000559309 MIPP30301 263 aa15.37■□□□□ 0.05
SNRPA1-207ENST00000559309 ACBD5Q5T8D3 534 aaPredicted RBP15.37■□□□□ 0.05
SNRPA1-207ENST00000559309 MANEALQ5VSG8 457 aa15.37■□□□□ 0.05
SNRPA1-207ENST00000559309 LRRC38Q5VT99 294 aa15.37■□□□□ 0.05
SNRPA1-207ENST00000559309 NADSYN1Q6IA69 706 aa15.37■□□□□ 0.05
SNRPA1-207ENST00000559309 POLNQ7Z5Q5 900 aa15.37■□□□□ 0.05
SNRPA1-207ENST00000559309 FAM131BQ86XD5 332 aa15.37■□□□□ 0.05
SNRPA1-207ENST00000559309 CPXM2Q8N436 756 aa15.37■□□□□ 0.05
SNRPA1-207ENST00000559309 CCDC185Q8N715 623 aa15.37■□□□□ 0.05
SNRPA1-207ENST00000559309 BPIFB1Q8TDL5 484 aa15.37■□□□□ 0.05
SNRPA1-207ENST00000559309 ASIC4Q96FT7 647 aa15.37■□□□□ 0.05
SNRPA1-207ENST00000559309 BTN2A3PQ96KV6 586 aa15.37■□□□□ 0.05
SNRPA1-207ENST00000559309 LRFN3Q9BTN0 628 aa15.37■□□□□ 0.05
SNRPA1-207ENST00000559309 OSBPL2Q9H1P3 480 aa15.37■□□□□ 0.05
SNRPA1-207ENST00000559309 KCNK12Q9HB15 430 aa15.37■□□□□ 0.05
SNRPA1-207ENST00000559309 TRPV5Q9NQA5 729 aa15.37■□□□□ 0.05
SNRPA1-207ENST00000559309 XPO7Q9UIA9 1087 aaKnown RBP15.37■□□□□ 0.05
SNRPA1-207ENST00000559309 FZD10Q9ULW2 581 aa15.37■□□□□ 0.05
SNRPA1-207ENST00000559309 NUMBLQ9Y6R0 609 aa15.37■□□□□ 0.05
SNRPA1-207ENST00000559309 DOCK4Q8N1I0 1966 aa15.36■□□□□ 0.05
SNRPA1-207ENST00000559309 IGLV3-10A0A075B6K4 115 aa15.36■□□□□ 0.05
SNRPA1-207ENST00000559309 BUB1O43683 1085 aa15.36■□□□□ 0.05
SNRPA1-207ENST00000559309 ACSL4O60488 711 aa15.36■□□□□ 0.05
SNRPA1-207ENST00000559309 PSMC3P17980 439 aa15.36■□□□□ 0.05
SNRPA1-207ENST00000559309 CORO1AP31146 461 aaKnown RBP15.36■□□□□ 0.05
SNRPA1-207ENST00000559309 ARSEP51690 589 aa15.36■□□□□ 0.05
SNRPA1-207ENST00000559309 MLLT6P55198 1093 aaPredicted RBP15.36■□□□□ 0.05
SNRPA1-207ENST00000559309 TAS2R40P59535 323 aa15.36■□□□□ 0.05
SNRPA1-207ENST00000559309 NME3Q13232 169 aa15.36■□□□□ 0.05
SNRPA1-207ENST00000559309 CDO1Q16878 200 aa15.36■□□□□ 0.05
SNRPA1-207ENST00000559309 EML3Q32P44 896 aa15.36■□□□□ 0.05
SNRPA1-207ENST00000559309 PIK3R6Q5UE93 754 aa15.36■□□□□ 0.05
SNRPA1-207ENST00000559309 DAB2IPQ5VWQ8 1189 aa15.36■□□□□ 0.05
SNRPA1-207ENST00000559309 TXNRD3NBQ6F5E7 133 aa15.36■□□□□ 0.05
SNRPA1-207ENST00000559309 CC2D1AQ6P1N0 951 aaPredicted RBP15.36■□□□□ 0.05
SNRPA1-207ENST00000559309 ADGRG2Q8IZP9 1017 aa15.36■□□□□ 0.05
SNRPA1-207ENST00000559309 OSCP1Q8WVF1 389 aa15.36■□□□□ 0.05
SNRPA1-207ENST00000559309 TEKT4Q8WW24 435 aa15.36■□□□□ 0.05
SNRPA1-207ENST00000559309 NACA2Q9H009 215 aa15.36■□□□□ 0.05
SNRPA1-207ENST00000559309 TKTL2Q9H0I9 626 aa15.36■□□□□ 0.05
SNRPA1-207ENST00000559309 WDCPQ9H6R7 721 aa15.36■□□□□ 0.05
SNRPA1-207ENST00000559309 MARK1Q9P0L2 795 aa15.36■□□□□ 0.05
SNRPA1-207ENST00000559309 USP18Q9UMW8 372 aa15.36■□□□□ 0.05
SNRPA1-207ENST00000559309 PAXBP1Q9Y5B6 917 aa15.36■□□□□ 0.05
SNRPA1-207ENST00000559309 CHADO15335 359 aa15.35■□□□□ 0.05
SNRPA1-207ENST00000559309 GPR37L1O60883 481 aa15.35■□□□□ 0.05
SNRPA1-207ENST00000559309 PAGE1O75459 146 aa15.35■□□□□ 0.05
SNRPA1-207ENST00000559309 RNF8O76064 485 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms