RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 SMOQ99835 787 aa11.66□□□□□ -0.54
CLPX-204ENST00000559152 EBNA1BP2Q99848 306 aaKnown RBP11.66□□□□□ -0.54
CLPX-204ENST00000559152 VPS11Q9H270 941 aa11.66□□□□□ -0.54
CLPX-204ENST00000559152 KIF9Q9HAQ2 790 aa11.66□□□□□ -0.54
CLPX-204ENST00000559152 CSNK1G1Q9HCP0 422 aa11.66□□□□□ -0.54
CLPX-204ENST00000559152 MIOSQ9NXC5 875 aa11.66□□□□□ -0.54
CLPX-204ENST00000559152 PRKAG3Q9UGI9 489 aa11.66□□□□□ -0.54
CLPX-204ENST00000559152 MYBPHLA2RUH7 354 aa11.65□□□□□ -0.54
CLPX-204ENST00000559152 CASTOR2A6NHX0 329 aa11.65□□□□□ -0.54
CLPX-204ENST00000559152 AVILO75366 819 aa11.65□□□□□ -0.54
CLPX-204ENST00000559152 DNAJC8O75937 253 aaPredicted RBP11.65□□□□□ -0.54
CLPX-204ENST00000559152 MAP3K6O95382 1288 aa11.65□□□□□ -0.54
CLPX-204ENST00000559152 APOEP02649 317 aa11.65□□□□□ -0.54
CLPX-204ENST00000559152 FOXN2P32314 431 aa11.65□□□□□ -0.54
CLPX-204ENST00000559152 PRKD1Q15139 912 aaPredicted RBP11.65□□□□□ -0.54
CLPX-204ENST00000559152 KCNA10Q16322 511 aa11.65□□□□□ -0.54
CLPX-204ENST00000559152 PARP6Q2NL67 630 aa11.65□□□□□ -0.54
CLPX-204ENST00000559152 TIGD5Q53EQ6 642 aa11.65□□□□□ -0.54
CLPX-204ENST00000559152 INTS6LQ5JSJ4 861 aaKnown RBP11.65□□□□□ -0.54
CLPX-204ENST00000559152 FAXCQ5TGI0 409 aa11.65□□□□□ -0.54
CLPX-204ENST00000559152 OTUD1Q5VV17 481 aaPredicted RBP11.65□□□□□ -0.54
CLPX-204ENST00000559152 SYPL2Q5VXT5 272 aa11.65□□□□□ -0.54
CLPX-204ENST00000559152 LVRNQ6Q4G3 990 aa11.65□□□□□ -0.54
CLPX-204ENST00000559152 RFX8Q6ZV50 586 aa11.65□□□□□ -0.54
CLPX-204ENST00000559152 PAXIP1Q6ZW49 1069 aaPredicted RBP11.65□□□□□ -0.54
CLPX-204ENST00000559152 THEM5Q8N1Q8 247 aa11.65□□□□□ -0.54
CLPX-204ENST00000559152 PYROXD2Q8N2H3 581 aa11.65□□□□□ -0.54
CLPX-204ENST00000559152 KLHDC9Q8NEP7 349 aa11.65□□□□□ -0.54
CLPX-204ENST00000559152 GSDMBQ8TAX9 411 aa11.65□□□□□ -0.54
CLPX-204ENST00000559152 NDRG1Q92597 394 aaKnown RBP11.65□□□□□ -0.54
CLPX-204ENST00000559152 HHIPL1Q96JK4 782 aa11.65□□□□□ -0.54
CLPX-204ENST00000559152 NAT9Q9BTE0 207 aa11.65□□□□□ -0.54
CLPX-204ENST00000559152 AGO3Q9H9G7 860 aaKnown RBP11.65□□□□□ -0.54
CLPX-204ENST00000559152 TMEM51Q9NW97 253 aa11.65□□□□□ -0.54
CLPX-204ENST00000559152 FBXW11Q9UKB1 542 aa11.65□□□□□ -0.54
CLPX-204ENST00000559152 GABRQQ9UN88 632 aa11.65□□□□□ -0.54
CLPX-204ENST00000559152 NOD1Q9Y239 953 aa11.65□□□□□ -0.54
CLPX-204ENST00000559152 SCN10AQ9Y5Y9 1956 aa11.65□□□□□ -0.54
CLPX-204ENST00000559152 TRIP12Q14669 1992 aaPredicted RBP11.65□□□□□ -0.55
CLPX-204ENST00000559152 DNM1LO00429 736 aa11.64□□□□□ -0.55
CLPX-204ENST00000559152 MTSS1O43312 755 aa11.64□□□□□ -0.55
CLPX-204ENST00000559152 CREB3O43889 395 aa11.64□□□□□ -0.55
CLPX-204ENST00000559152 KRT38O76015 456 aa11.64□□□□□ -0.55
CLPX-204ENST00000559152 B3GAT3O94766 335 aa11.64□□□□□ -0.55
CLPX-204ENST00000559152 LTFP02788 710 aa11.64□□□□□ -0.55
CLPX-204ENST00000559152 SNRPAP09012 282 aaKnown RBP11.64□□□□□ -0.55
CLPX-204ENST00000559152 NCAM1P13591 858 aa11.64□□□□□ -0.55
CLPX-204ENST00000559152 ALADP13716 330 aa11.64□□□□□ -0.55
CLPX-204ENST00000559152 CD52P31358 61 aa11.64□□□□□ -0.55
CLPX-204ENST00000559152 CACNB2Q08289 660 aaPredicted RBP11.64□□□□□ -0.55
CLPX-204ENST00000559152 TUSC3Q13454 348 aa11.64□□□□□ -0.55
CLPX-204ENST00000559152 DPYSQ14117 519 aa11.64□□□□□ -0.55
CLPX-204ENST00000559152 DSC3Q14574 896 aa11.64□□□□□ -0.55
CLPX-204ENST00000559152 ZKSCAN8Q15776 578 aaPredicted RBP11.64□□□□□ -0.55
CLPX-204ENST00000559152 FAM26DQ5JW98 314 aa11.64□□□□□ -0.55
CLPX-204ENST00000559152 FAM171BQ6P995 826 aa11.64□□□□□ -0.55
CLPX-204ENST00000559152 BEND5Q7L4P6 421 aa11.64□□□□□ -0.55
CLPX-204ENST00000559152 CTAGE3PQ8IX95 158 aa11.64□□□□□ -0.55
CLPX-204ENST00000559152 PIGVQ9NUD9 493 aa11.64□□□□□ -0.55
CLPX-204ENST00000559152 PHTF1Q9UMS5 762 aa11.64□□□□□ -0.55
CLPX-204ENST00000559152 TTLL3Q9Y4R7 772 aa11.64□□□□□ -0.55
CLPX-204ENST00000559152 SYNJ2BP-COX16A0A087WUM0 186 aa11.64□□□□□ -0.55
CLPX-204ENST00000559152 YJEFN3A6XGL0 299 aa11.64□□□□□ -0.55
CLPX-204ENST00000559152 E7ENQ6 273 aa11.64□□□□□ -0.55
CLPX-204ENST00000559152 NRP1O14786 923 aa11.64□□□□□ -0.55
CLPX-204ENST00000559152 LPXNO60711 386 aa11.64□□□□□ -0.55
CLPX-204ENST00000559152 MX2P20592 715 aa11.64□□□□□ -0.55
CLPX-204ENST00000559152 CNTFP26441 200 aa11.64□□□□□ -0.55
CLPX-204ENST00000559152 ALDH3A1P30838 453 aa11.64□□□□□ -0.55
CLPX-204ENST00000559152 SERPINB9P50453 376 aa11.64□□□□□ -0.55
CLPX-204ENST00000559152 SLC18A2Q05940 514 aa11.64□□□□□ -0.55
CLPX-204ENST00000559152 CCDC15Q0P6D6 951 aa11.64□□□□□ -0.55
CLPX-204ENST00000559152 AP1B1Q10567 949 aa11.64□□□□□ -0.55
CLPX-204ENST00000559152 MTM1Q13496 603 aa11.64□□□□□ -0.55
CLPX-204ENST00000559152 SLC1A5Q15758 541 aa11.64□□□□□ -0.55
CLPX-204ENST00000559152 SYCP2LQ5T4T6 812 aa11.64□□□□□ -0.55
CLPX-204ENST00000559152 LRRC8BQ6P9F7 803 aa11.64□□□□□ -0.55
CLPX-204ENST00000559152 COLGALT1Q8NBJ5 622 aa11.64□□□□□ -0.55
CLPX-204ENST00000559152 C3orf58Q8NDZ4 430 aa11.64□□□□□ -0.55
CLPX-204ENST00000559152 ZMIZ2Q8NF64 920 aa11.64□□□□□ -0.55
CLPX-204ENST00000559152 TCP10LQ8TDR4 215 aa11.64□□□□□ -0.55
CLPX-204ENST00000559152 P2RY11Q96G91 374 aa11.64□□□□□ -0.55
CLPX-204ENST00000559152 APOPT1Q96IL0 206 aa11.64□□□□□ -0.55
CLPX-204ENST00000559152 SIGLEC10Q96LC7 697 aa11.64□□□□□ -0.55
CLPX-204ENST00000559152 RXFP1Q9HBX9 757 aa11.64□□□□□ -0.55
CLPX-204ENST00000559152 DMAP1Q9NPF5 467 aaPredicted RBP11.64□□□□□ -0.55
CLPX-204ENST00000559152 COX16Q9P0S2 106 aa11.64□□□□□ -0.55
CLPX-204ENST00000559152 ABT1Q9ULW3 272 aaKnown RBP11.64□□□□□ -0.55
CLPX-204ENST00000559152 SLC12A4Q9UP95 1085 aa11.64□□□□□ -0.55
CLPX-204ENST00000559152 PCDHA11Q9Y5I1 949 aa11.64□□□□□ -0.55
CLPX-204ENST00000559152 TIMM13Q9Y5L4 95 aaPredicted RBP11.64□□□□□ -0.55
CLPX-204ENST00000559152 MAD1L1Q9Y6D9 718 aa11.64□□□□□ -0.55
CLPX-204ENST00000559152 CFAP73A6NFT4 308 aa11.63□□□□□ -0.55
CLPX-204ENST00000559152 SDR42E2A6NKP2 422 aa11.63□□□□□ -0.55
CLPX-204ENST00000559152 M0QZQ0 153 aa11.63□□□□□ -0.55
CLPX-204ENST00000559152 RNF103O00237 685 aa11.63□□□□□ -0.55
CLPX-204ENST00000559152 MFSD11O43934 449 aa11.63□□□□□ -0.55
CLPX-204ENST00000559152 FYNP06241 537 aa11.63□□□□□ -0.55
CLPX-204ENST00000559152 USP17L7P0C7H9 530 aa11.63□□□□□ -0.55
CLPX-204ENST00000559152 CYP2C18P33260 490 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms