RNA–Protein interactions for RNA: ENST00000558795.1

CPNE6-208, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 1,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-208ENST00000558795 KIAA1468Q9P260 1216 aa16.08■□□□□ 0.16
CPNE6-208ENST00000558795 PCDHGB2Q9Y5G2 931 aa16.08■□□□□ 0.16
CPNE6-208ENST00000558795 APC2O95996 2303 aa16.08■□□□□ 0.16
CPNE6-208ENST00000558795 FREM2Q5SZK8 3169 aa16.07■□□□□ 0.16
CPNE6-208ENST00000558795 A0A1B0GVT2 93 aa16.07■□□□□ 0.16
CPNE6-208ENST00000558795 ASS1P00966 412 aaKnown RBP16.07■□□□□ 0.16
CPNE6-208ENST00000558795 IGLV3-19P01714 112 aa16.07■□□□□ 0.16
CPNE6-208ENST00000558795 KLKB1P03952 638 aa16.07■□□□□ 0.16
CPNE6-208ENST00000558795 EPHX1P07099 455 aa16.07■□□□□ 0.16
CPNE6-208ENST00000558795 HMBSP08397 361 aa16.07■□□□□ 0.16
CPNE6-208ENST00000558795 ATXN1LP0C7T5 689 aaKnown RBP16.07■□□□□ 0.16
CPNE6-208ENST00000558795 CORO1AP31146 461 aaKnown RBP16.07■□□□□ 0.16
CPNE6-208ENST00000558795 ASPAP45381 313 aa16.07■□□□□ 0.16
CPNE6-208ENST00000558795 DLG4P78352 724 aa16.07■□□□□ 0.16
CPNE6-208ENST00000558795 BNC1Q01954 994 aa16.07■□□□□ 0.16
CPNE6-208ENST00000558795 CCDC186Q7Z3E2 898 aa16.07■□□□□ 0.16
CPNE6-208ENST00000558795 FAM124AQ86V42 546 aa16.07■□□□□ 0.16
CPNE6-208ENST00000558795 GALNT15Q8N3T1 639 aa16.07■□□□□ 0.16
CPNE6-208ENST00000558795 BAHD1Q8TBE0 780 aaPredicted RBP16.07■□□□□ 0.16
CPNE6-208ENST00000558795 NT5C1AQ9BXI3 368 aa16.07■□□□□ 0.16
CPNE6-208ENST00000558795 IMPG2Q9BZV3 1241 aa16.07■□□□□ 0.16
CPNE6-208ENST00000558795 CLIC5Q9NZA1 410 aa16.07■□□□□ 0.16
CPNE6-208ENST00000558795 CKAP5Q14008 2032 aa16.07■□□□□ 0.16
CPNE6-208ENST00000558795 PRKCHP24723 683 aa16.06■□□□□ 0.16
CPNE6-208ENST00000558795 AFF3P51826 1226 aaKnown RBP16.06■□□□□ 0.16
CPNE6-208ENST00000558795 KIF11P52732 1056 aa16.06■□□□□ 0.16
CPNE6-208ENST00000558795 COPAP53621 1224 aa16.06■□□□□ 0.16
CPNE6-208ENST00000558795 INCA1Q0VD86 236 aa16.06■□□□□ 0.16
CPNE6-208ENST00000558795 EFEMP1Q12805 493 aa16.06■□□□□ 0.16
CPNE6-208ENST00000558795 TEAD4Q15561 434 aa16.06■□□□□ 0.16
CPNE6-208ENST00000558795 SERPINA13PQ6UXR4 307 aa16.06■□□□□ 0.16
CPNE6-208ENST00000558795 SV2AQ7L0J3 742 aa16.06■□□□□ 0.16
CPNE6-208ENST00000558795 SCD5Q86SK9 330 aa16.06■□□□□ 0.16
CPNE6-208ENST00000558795 TMC2Q8TDI7 906 aa16.06■□□□□ 0.16
CPNE6-208ENST00000558795 DDI1Q8WTU0 396 aa16.06■□□□□ 0.16
CPNE6-208ENST00000558795 ERCC4Q92889 916 aaPredicted RBP16.06■□□□□ 0.16
CPNE6-208ENST00000558795 P2RY11Q96G91 374 aa16.06■□□□□ 0.16
CPNE6-208ENST00000558795 PIWIL1Q96J94 861 aaKnown RBP16.06■□□□□ 0.16
CPNE6-208ENST00000558795 TWNKQ96RR1 684 aa16.06■□□□□ 0.16
CPNE6-208ENST00000558795 PCED1AQ9H1Q7 454 aa16.06■□□□□ 0.16
CPNE6-208ENST00000558795 TOR4AQ9NXH8 423 aa16.06■□□□□ 0.16
CPNE6-208ENST00000558795 DKK4Q9UBT3 224 aa16.06■□□□□ 0.16
CPNE6-208ENST00000558795 STRIP2Q9ULQ0 834 aa16.06■□□□□ 0.16
CPNE6-208ENST00000558795 LETM1O95202 739 aaPredicted RBP16.05■□□□□ 0.16
CPNE6-208ENST00000558795 HLA-DRAP01903 254 aa16.05■□□□□ 0.16
CPNE6-208ENST00000558795 CSNK1EP49674 416 aaKnown RBP16.05■□□□□ 0.16
CPNE6-208ENST00000558795 ZNF658Q5TYW1 1059 aaPredicted RBP16.05■□□□□ 0.16
CPNE6-208ENST00000558795 CAVIN1Q6NZI2 390 aaKnown RBP16.05■□□□□ 0.16
CPNE6-208ENST00000558795 DBX2Q6ZNG2 339 aa16.05■□□□□ 0.16
CPNE6-208ENST00000558795 RSRC2Q7L4I2 434 aaKnown RBP16.05■□□□□ 0.16
CPNE6-208ENST00000558795 DENND1CQ8IV53 801 aa16.05■□□□□ 0.16
CPNE6-208ENST00000558795 SLC9A9Q8IVB4 645 aa16.05■□□□□ 0.16
CPNE6-208ENST00000558795 ZNF276Q8N554 614 aa16.05■□□□□ 0.16
CPNE6-208ENST00000558795 C1orf216Q8TAB5 229 aa16.05■□□□□ 0.16
CPNE6-208ENST00000558795 DUSP16Q9BY84 665 aa16.05■□□□□ 0.16
CPNE6-208ENST00000558795 SLC2A11Q9BYW1 496 aa16.05■□□□□ 0.16
CPNE6-208ENST00000558795 CYP3A43Q9HB55 503 aa16.05■□□□□ 0.16
CPNE6-208ENST00000558795 DMAC2Q9NW81 257 aa16.05■□□□□ 0.16
CPNE6-208ENST00000558795 MAN1B1Q9UKM7 699 aa16.05■□□□□ 0.16
CPNE6-208ENST00000558795 AGO1Q9UL18 857 aaKnown RBP16.05■□□□□ 0.16
CPNE6-208ENST00000558795 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.05■□□□□ 0.16
CPNE6-208ENST00000558795 FRMD4BQ9Y2L6 1034 aa16.05■□□□□ 0.16
CPNE6-208ENST00000558795 IGSF10Q6WRI0 2623 aa16.04■□□□□ 0.16
CPNE6-208ENST00000558795 TRABD2BA6NFA1 517 aa16.04■□□□□ 0.16
CPNE6-208ENST00000558795 IKBKBO14920 756 aa16.04■□□□□ 0.16
CPNE6-208ENST00000558795 TIMM44O43615 452 aa16.04■□□□□ 0.16
CPNE6-208ENST00000558795 NR3C1P04150 777 aa16.04■□□□□ 0.16
CPNE6-208ENST00000558795 CD58P19256 250 aa16.04■□□□□ 0.16
CPNE6-208ENST00000558795 CYP4F3Q08477 520 aa16.04■□□□□ 0.16
CPNE6-208ENST00000558795 STK4Q13043 487 aa16.04■□□□□ 0.16
CPNE6-208ENST00000558795 KIF19Q2TAC6 998 aa16.04■□□□□ 0.16
CPNE6-208ENST00000558795 CCDC157Q569K6 752 aa16.04■□□□□ 0.16
CPNE6-208ENST00000558795 CEP135Q66GS9 1140 aa16.04■□□□□ 0.16
CPNE6-208ENST00000558795 MARCH9Q86YJ5 346 aa16.04■□□□□ 0.16
CPNE6-208ENST00000558795 ARHGAP18Q8N392 663 aa16.04■□□□□ 0.16
CPNE6-208ENST00000558795 CPXM2Q8N436 756 aa16.04■□□□□ 0.16
CPNE6-208ENST00000558795 OR2T3Q8NH03 318 aa16.04■□□□□ 0.16
CPNE6-208ENST00000558795 SORCS1Q8WY21 1168 aa16.04■□□□□ 0.16
CPNE6-208ENST00000558795 LHX5Q9H2C1 402 aa16.04■□□□□ 0.16
CPNE6-208ENST00000558795 C6orf106Q9H6K1 298 aaPredicted RBP16.04■□□□□ 0.16
CPNE6-208ENST00000558795 MARCH2Q9P0N8 246 aa16.04■□□□□ 0.16
CPNE6-208ENST00000558795 BTBD3Q9Y2F9 522 aa16.04■□□□□ 0.16
CPNE6-208ENST00000558795 SNX11Q9Y5W9 270 aa16.04■□□□□ 0.16
CPNE6-208ENST00000558795 USP3Q9Y6I4 520 aa16.04■□□□□ 0.16
CPNE6-208ENST00000558795 URB1O60287 2271 aaKnown RBP16.04■□□□□ 0.16
CPNE6-208ENST00000558795 TMEM131Q92545 1883 aa16.03■□□□□ 0.16
CPNE6-208ENST00000558795 GOLGA4Q13439 2230 aaKnown RBP16.03■□□□□ 0.16
CPNE6-208ENST00000558795 SLC12A8A0AV02 714 aa16.03■□□□□ 0.16
CPNE6-208ENST00000558795 TNFSF14O43557 240 aa16.03■□□□□ 0.16
CPNE6-208ENST00000558795 DKK1O94907 266 aa16.03■□□□□ 0.16
CPNE6-208ENST00000558795 HLA-EP13747 358 aa16.03■□□□□ 0.16
CPNE6-208ENST00000558795 PPP1R2P41236 205 aa16.03■□□□□ 0.16
CPNE6-208ENST00000558795 GRK6P43250 576 aa16.03■□□□□ 0.16
CPNE6-208ENST00000558795 FNDC3BQ53EP0 1204 aaKnown RBP16.03■□□□□ 0.16
CPNE6-208ENST00000558795 RBM43Q6ZSC3 357 aaKnown RBP16.03■□□□□ 0.16
CPNE6-208ENST00000558795 CCDC150Q8NCX0 1101 aa16.03■□□□□ 0.16
CPNE6-208ENST00000558795 TMEM174Q8WUU8 243 aa16.03■□□□□ 0.16
CPNE6-208ENST00000558795 BBC3Q96PG8 261 aaPredicted RBP16.03■□□□□ 0.16
CPNE6-208ENST00000558795 NIF3L1Q9GZT8 377 aa16.03■□□□□ 0.16
CPNE6-208ENST00000558795 TMEM63CQ9P1W3 806 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms