RNA–Protein interactions for RNA: ENST00000558731.1

CSPG4P5-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 5, humanhuman

BASIC

Gene CSPG4P5, Length 3,730 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5-201ENST00000558731 ADAM7Q9H2U9 754 aa11.18□□□□□ -0.62
CSPG4P5-201ENST00000558731 RGS18Q9NS28 235 aa11.18□□□□□ -0.62
CSPG4P5-201ENST00000558731 WDR91A4D1P6 747 aa11.18□□□□□ -0.62
CSPG4P5-201ENST00000558731 ENPP3O14638 875 aa11.18□□□□□ -0.62
CSPG4P5-201ENST00000558731 TBX18O95935 607 aa11.18□□□□□ -0.62
CSPG4P5-201ENST00000558731 CPP00450 1065 aa11.18□□□□□ -0.62
CSPG4P5-201ENST00000558731 BRAFP15056 766 aa11.18□□□□□ -0.62
CSPG4P5-201ENST00000558731 ATP2A2P16615 1042 aaKnown RBP11.18□□□□□ -0.62
CSPG4P5-201ENST00000558731 ERCC2P18074 760 aa11.18□□□□□ -0.62
CSPG4P5-201ENST00000558731 IL4RP24394 825 aa11.18□□□□□ -0.62
CSPG4P5-201ENST00000558731 MORF4L2Q15014 288 aa11.18□□□□□ -0.62
CSPG4P5-201ENST00000558731 MSS51Q4VC12 460 aa11.18□□□□□ -0.62
CSPG4P5-201ENST00000558731 TAOK1Q7L7X3 1001 aa11.18□□□□□ -0.62
CSPG4P5-201ENST00000558731 ZCCHC9Q8N567 271 aaKnown RBP11.18□□□□□ -0.62
CSPG4P5-201ENST00000558731 DNAAF3Q8N9W5 541 aa11.18□□□□□ -0.62
CSPG4P5-201ENST00000558731 TFB1MQ8WVM0 346 aaKnown RBP11.18□□□□□ -0.62
CSPG4P5-201ENST00000558731 STMN4Q9H169 189 aaPredicted RBP11.18□□□□□ -0.62
CSPG4P5-201ENST00000558731 EPB41L4BQ9H329 900 aa11.18□□□□□ -0.62
CSPG4P5-201ENST00000558731 PRDM12Q9H4Q4 367 aa11.18□□□□□ -0.62
CSPG4P5-201ENST00000558731 ETNK1Q9HBU6 452 aa11.18□□□□□ -0.62
CSPG4P5-201ENST00000558731 CNGB3Q9NQW8 809 aa11.18□□□□□ -0.62
CSPG4P5-201ENST00000558731 ARHGEF4Q9NR80 690 aa11.18□□□□□ -0.62
CSPG4P5-201ENST00000558731 OR12D3Q9UGF7 316 aa11.18□□□□□ -0.62
CSPG4P5-201ENST00000558731 DRG1Q9Y295 367 aaKnown RBP11.18□□□□□ -0.62
CSPG4P5-201ENST00000558731 ARHGEF37A1IGU5 675 aa11.17□□□□□ -0.62
CSPG4P5-201ENST00000558731 IGHA2P01877 340 aa11.17□□□□□ -0.62
CSPG4P5-201ENST00000558731 STIP1P31948 543 aaKnown RBP11.17□□□□□ -0.62
CSPG4P5-201ENST00000558731 MDH1P40925 334 aaKnown RBP11.17□□□□□ -0.62
CSPG4P5-201ENST00000558731 ELK3P41970 407 aa11.17□□□□□ -0.62
CSPG4P5-201ENST00000558731 ITKQ08881 620 aa11.17□□□□□ -0.62
CSPG4P5-201ENST00000558731 SLC10A2Q12908 348 aaPredicted RBP11.17□□□□□ -0.62
CSPG4P5-201ENST00000558731 DUSP4Q13115 394 aa11.17□□□□□ -0.62
CSPG4P5-201ENST00000558731 MICALCLQ6ZW33 695 aa11.17□□□□□ -0.62
CSPG4P5-201ENST00000558731 CYP4V2Q6ZWL3 525 aaPredicted RBP11.17□□□□□ -0.62
CSPG4P5-201ENST00000558731 REM2Q8IYK8 340 aaPredicted RBP11.17□□□□□ -0.62
CSPG4P5-201ENST00000558731 DCP1BQ8IZD4 617 aaKnown RBP11.17□□□□□ -0.62
CSPG4P5-201ENST00000558731 PPM1NQ8N819 430 aa11.17□□□□□ -0.62
CSPG4P5-201ENST00000558731 ZNF670Q9BS34 389 aa11.17□□□□□ -0.62
CSPG4P5-201ENST00000558731 KIF9Q9HAQ2 790 aa11.17□□□□□ -0.62
CSPG4P5-201ENST00000558731 A0A1W2PQH9 124 aa11.17□□□□□ -0.62
CSPG4P5-201ENST00000558731 FBXO21O94952 628 aa11.17□□□□□ -0.62
CSPG4P5-201ENST00000558731 LSP1P33241 339 aa11.17□□□□□ -0.62
CSPG4P5-201ENST00000558731 ADRA1BP35368 520 aa11.17□□□□□ -0.62
CSPG4P5-201ENST00000558731 ACTN3Q08043 901 aaPredicted RBP11.17□□□□□ -0.62
CSPG4P5-201ENST00000558731 OLIG2Q13516 323 aa11.17□□□□□ -0.62
CSPG4P5-201ENST00000558731 AUHQ13825 339 aaKnown RBP11.17□□□□□ -0.62
CSPG4P5-201ENST00000558731 MAPRE1Q15691 268 aaKnown RBP11.17□□□□□ -0.62
CSPG4P5-201ENST00000558731 C10orf120Q5SQS8 335 aa11.17□□□□□ -0.62
CSPG4P5-201ENST00000558731 RNASEH2BQ5TBB1 312 aaKnown RBP11.17□□□□□ -0.62
CSPG4P5-201ENST00000558731 TMEM173Q86WV6 379 aaPredicted RBP11.17□□□□□ -0.62
CSPG4P5-201ENST00000558731 PDCD7Q8N8D1 485 aaKnown RBP11.17□□□□□ -0.62
CSPG4P5-201ENST00000558731 PRCCQ92733 491 aaPredicted RBP11.17□□□□□ -0.62
CSPG4P5-201ENST00000558731 BHMTQ93088 406 aa11.17□□□□□ -0.62
CSPG4P5-201ENST00000558731 EPAS1Q99814 870 aa11.17□□□□□ -0.62
CSPG4P5-201ENST00000558731 COLEC11Q9BWP8 271 aa11.17□□□□□ -0.62
CSPG4P5-201ENST00000558731 DTLQ9NZJ0 730 aa11.17□□□□□ -0.62
CSPG4P5-201ENST00000558731 ADAM28Q9UKQ2 775 aa11.17□□□□□ -0.62
CSPG4P5-201ENST00000558731 GOLGA6L7A0A1B0GV03 622 aa11.17□□□□□ -0.62
CSPG4P5-201ENST00000558731 ACRP10323 421 aa11.17□□□□□ -0.62
CSPG4P5-201ENST00000558731 GRIA1P42261 906 aa11.17□□□□□ -0.62
CSPG4P5-201ENST00000558731 ZNF280DQ6N043 979 aa11.17□□□□□ -0.62
CSPG4P5-201ENST00000558731 CES3Q6UWW8 571 aa11.17□□□□□ -0.62
CSPG4P5-201ENST00000558731 STRADAQ7RTN6 431 aa11.17□□□□□ -0.62
CSPG4P5-201ENST00000558731 DQX1Q8TE96 717 aaKnown RBP11.17□□□□□ -0.62
CSPG4P5-201ENST00000558731 FBF1Q8TES7 1133 aa11.17□□□□□ -0.62
CSPG4P5-201ENST00000558731 FBXO32Q969P5 355 aa11.17□□□□□ -0.62
CSPG4P5-201ENST00000558731 SUSD3Q96L08 255 aa11.17□□□□□ -0.62
CSPG4P5-201ENST00000558731 MPP6Q9NZW5 540 aa11.17□□□□□ -0.62
CSPG4P5-201ENST00000558731 PAK5Q9P286 719 aa11.17□□□□□ -0.62
CSPG4P5-201ENST00000558731 KANSL3Q9P2N6 904 aa11.17□□□□□ -0.62
CSPG4P5-201ENST00000558731 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.17□□□□□ -0.62
CSPG4P5-201ENST00000558731 CDY1Q9Y6F8 540 aa11.17□□□□□ -0.62
CSPG4P5-201ENST00000558731 DPYSL4O14531 572 aa11.16□□□□□ -0.62
CSPG4P5-201ENST00000558731 SLC11A1P49279 550 aa11.16□□□□□ -0.62
CSPG4P5-201ENST00000558731 PGFP49763 221 aa11.16□□□□□ -0.62
CSPG4P5-201ENST00000558731 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.16□□□□□ -0.62
CSPG4P5-201ENST00000558731 RFX8Q6ZV50 586 aa11.16□□□□□ -0.62
CSPG4P5-201ENST00000558731 PCGF5Q86SE9 256 aa11.16□□□□□ -0.62
CSPG4P5-201ENST00000558731 SUGP1Q8IWZ8 645 aaKnown RBP11.16□□□□□ -0.62
CSPG4P5-201ENST00000558731 PAF1Q8N7H5 531 aa11.16□□□□□ -0.62
CSPG4P5-201ENST00000558731 SLCO2A1Q92959 643 aa11.16□□□□□ -0.62
CSPG4P5-201ENST00000558731 PRMT1Q99873 361 aaKnown RBP11.16□□□□□ -0.62
CSPG4P5-201ENST00000558731 FTHL17Q9BXU8 183 aa11.16□□□□□ -0.62
CSPG4P5-201ENST00000558731 CD248Q9HCU0 757 aa11.16□□□□□ -0.62
CSPG4P5-201ENST00000558731 ALG13Q9NP73 1137 aaKnown RBP11.16□□□□□ -0.62
CSPG4P5-201ENST00000558731 TMEM161AQ9NX61 479 aa11.16□□□□□ -0.62
CSPG4P5-201ENST00000558731 NKIRAS1Q9NYS0 192 aa11.16□□□□□ -0.62
CSPG4P5-201ENST00000558731 FZD10Q9ULW2 581 aa11.16□□□□□ -0.62
CSPG4P5-201ENST00000558731 TMEM120BA0PK00 339 aa11.16□□□□□ -0.62
CSPG4P5-201ENST00000558731 RNF103O00237 685 aa11.16□□□□□ -0.62
CSPG4P5-201ENST00000558731 EOMESO95936 686 aa11.16□□□□□ -0.62
CSPG4P5-201ENST00000558731 TGM2P21980 687 aa11.16□□□□□ -0.62
CSPG4P5-201ENST00000558731 PHBP35232 272 aa11.16□□□□□ -0.62
CSPG4P5-201ENST00000558731 IFT88Q13099 833 aa11.16□□□□□ -0.62
CSPG4P5-201ENST00000558731 RPAINQ86UA6 219 aa11.16□□□□□ -0.62
CSPG4P5-201ENST00000558731 CYP4X1Q8N118 509 aa11.16□□□□□ -0.62
CSPG4P5-201ENST00000558731 HTR3CQ8WXA8 447 aa11.16□□□□□ -0.62
CSPG4P5-201ENST00000558731 ATXN7L3BQ96GX2 97 aa11.16□□□□□ -0.62
CSPG4P5-201ENST00000558731 TSPAN18Q96SJ8 248 aa11.16□□□□□ -0.62
CSPG4P5-201ENST00000558731 IL1RAPL1Q9NZN1 696 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms